New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2664051 =49 (0.560)6 (0.080) 5/200 NT 13.9% intergenic (+33/‑130) prpC/acnA‑II methylcitrate synthase/aconitate hydratase
?NC_002947 2664132 = 35 (0.490)intergenic (+114/‑49) prpC/acnA‑II methylcitrate synthase/aconitate hydratase

CGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCAGGCACCGACCTGGACTACTTCGACGCCCGCGCGGCGGTCGAGGCGATCAAGCCCGGCGCCTACGACGGCT  >  NC_002947/2663989‑2664280
                                                                                                                                               |                                                                                                                                                     
cgcCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTa                                                                                                                                                 <  1:944641/150‑1 (MQ=255)
  ccAGTTCGTGCCGATCGAGCAGCGCTTAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACg                                                                                                                                               <  1:2069869/150‑1 (MQ=255)
        cGTGCCGATCGAGCAGCGATGAATAGGTATAGAGAGGCAACTCGTTTGCCTTGAGGGAGCGGGCGTGCCCGCCAATGCCCCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCAGCTCCCACAGGTACGGTGaaa                                                                                                                                         <  2:139768/150‑1 (MQ=255)
          tGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAAcc                                                                                                                                       >  1:1400546/1‑150 (MQ=255)
            ccGATCGAGCAGGGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCTCTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCtt                                                                                                                                     <  2:830851/150‑1 (MQ=255)
             cGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCca                                                                                                                                                       <  2:1569041/131‑1 (MQ=255)
             cGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCca                                                                                                                                                       >  1:1569041/1‑131 (MQ=255)
               aTCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCg                                                                                                                                  >  2:118462/1‑150 (MQ=255)
                 cGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGaa                                                                                                                                <  1:1528002/150‑1 (MQ=255)
                  gAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAAt                                                                                                                               <  2:998302/150‑1 (MQ=255)
                    gcagcGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATcc                                                                                                                             >  1:808801/1‑150 (MQ=255)
                    gcagcGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATcc                                                                                                                             >  2:2210294/1‑150 (MQ=255)
                     cagcGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGt                                                                                                                                             >  1:431864/1‑133 (MQ=255)
                     cagcGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGt                                                                                                                                             <  2:431864/133‑1 (MQ=255)
                           tGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGAcc                                                                                                                      >  1:1350964/1‑150 (MQ=255)
                                  cTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAAc                                                                                                                                        >  2:1178528/1‑125 (MQ=255)
                                  cTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAAc                                                                                                                                        <  1:1178528/125‑1 (MQ=255)
                                          agGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGt                                                                                                                                             >  1:1448695/1‑112 (MQ=255)
                                          agGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGt                                                                                                                                             <  2:1448695/112‑1 (MQ=255)
                                           ggCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCatga                                                                                                      <  2:1122521/150‑1 (MQ=255)
                                              aaCCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACTCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCAtgatga                                                                                                   >  2:1571544/1‑150 (MQ=255)
                                                 ccGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAaca                                                                                                >  2:2084653/1‑150 (MQ=255)
                                                 ccGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAaca                                                                                                >  1:1510840/1‑150 (MQ=255)
                                                     ttCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGc                                                                                            <  2:1350964/150‑1 (MQ=255)
                                                                    GGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCt                                                                            >  2:2162606‑M1/1‑150 (MQ=255)
                                                                    GGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCt                                                                            >  2:1330542‑M1/1‑150 (MQ=255)
                                                                     GGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTg                                                                           <  1:1662943‑M1/150‑1 (MQ=255)
                                                                        GTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCa                                                                        >  2:808801‑M1/1‑150 (MQ=255)
                                                                           CCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCAGGc                                                                     <  1:1478545‑M1/150‑1 (MQ=255)
                                                                            ccgcgaatgcgtcagcaggtgcacagtggttacaaggccgggtgcattcgcgggcacgcccgctcccACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCat                                                                                                        >  2:1698421‑M2/68‑115 (MQ=255)
                                                                            ccgcgaatgcgtcagcaggtgcacagtggttacaaggccgggtgcattcgcgggcacgcccgctcccACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCat                                                                                                        <  1:1698421‑M2/48‑1 (MQ=255)
                                                                            CCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGAtt                                                                                                            <  1:669667‑M1/111‑1 (MQ=255)
                                                                            CCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGAtt                                                                                                            >  2:669667‑M1/1‑111 (MQ=255)
                                                                            CCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCAGGCa                                                                    <  1:1958517‑M1/150‑1 (MQ=255)
                                                                            CCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTCACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCAGGCa                                                                    <  1:408172‑M1/150‑1 (MQ=255)
                                                                             cgcgaatgcgtcagcaggtgcacagtggttacaaggccgggtgcattcgcgggcacgcccgctcccTCAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCAGGCAc                                                                   >  1:2121830‑M2/67‑150 (MQ=255)
                                                                             cgcgaatgcgtcagcaggtgcacagtggttacaaggccgggtgcattcgcgggcacgcccgctcccACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCAt                                                                                          >  2:1267841‑M2/67‑128 (MQ=255)
                                                                             cgcgaatgcgtcagcaggtgcacagtggttacaaggccgggtgcattcgcgggcacgcccgctcccACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCAt                                                                                          <  1:1267841‑M2/62‑1 (MQ=255)
                                                                              GCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCa                                                                                           <  1:585924‑M1/126‑1 (MQ=255)
                                                                              GCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCa                                                                                           >  2:585924‑M1/1‑126 (MQ=255)
                                                                              GCGAATGCACCCGGCCTTGTAACCACTGTGAACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGAACGAGCCTGATTCCatg                                                                                                       >  1:1156400‑M1/1‑114 (MQ=255)
                                                                              GCGAATGCACCCGGCCTTGTAACCACTGTGAACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGAACGAGCCTGATTCCatg                                                                                                       <  2:1156400‑M1/114‑1 (MQ=255)
                                                                                gaatgcgtcagcaggtgcacagtggttacaaggccgggtgcattcgcgggcacgcccgctcccTCAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCAGGCACCGa                                                                <  2:2121830‑M2/87‑1 (MQ=255)
                                                                                   TGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTTGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGTACACTGCATACCGCAAGCACCTGCCAGGCACCGACCt                                                             >  1:1893063‑M1/1‑150 (MQ=255)
                                                                                    GCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCa                                                                        <  2:871184‑M1/138‑1 (MQ=255)
                                                                                    GCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCAGGCACCGACCTg                                                            >  2:1958517‑M1/1‑150 (MQ=255)
                                                                                    GCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAAGCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCa                                                                        >  1:871184‑M1/1‑138 (MQ=255)
                                                                                      aCCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCAGGCGCCGACCTgaa                                                          >  2:167521/1‑148 (MQ=255)
                                                                                         cGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCAGGCACCGACCTGGacta                                                       >  1:525280/1‑150 (MQ=255)
                                                                                           gCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCAGGCACCGACCTGGactact                                                     >  2:2050504/1‑150 (MQ=255)
                                                                                                   aCCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCAGGCACCGACCTGGACTACTTCGACGcc                                             >  1:1306421/1‑150 (MQ=255)
                                                                                                    ccACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCAGGCACCGACCTGGACTACTTCGACGccc                                            <  1:118462/150‑1 (MQ=255)
                                                                                                    ccACTGTGCACCTGCTGACGCATTCGCGGCCACGCCCGCTCCCACATGTACGGTGAAACCTTCCGAATCCTGTGACCGAGTCCTATTCCATGATGAACACTGCATACCGCAAGCACCTGCCAGTCACCGACCTGGACTACTTCGACGccc                                            <  1:469023/150‑1 (MQ=255)
                                                                                                     cACTGTGCACCTGCTGACGCATTCGCGTGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCAGGCACCGACCTGGa                                                          >  2:1787352/1‑135 (MQ=255)
                                                                                                     cACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATc                                                                                                                              <  2:12018/68‑1 (MQ=255)
                                                                                                     cACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATc                                                                                                                              >  1:12018/1‑68 (MQ=255)
                                                                                                     cACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCAGGCACCGACCTGGa                                                          <  1:1787352/135‑1 (MQ=255)
                                                                                                         gtgCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCAGGCACCGACCTGGACTACTTCGACGCCcgcgcg                                       <  2:1912853/150‑1 (MQ=255)
                                                                                                           gCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCAGGCACCGACCTGGACTACTTCGACGCCCGCgcggc                                     <  1:303572/150‑1 (MQ=255)
                                                                                                                 gctgACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCAGGCACCGACCTGGACTACTTCGACGCCCGCGCGGCGGTCGa                               <  2:1400546/150‑1 (MQ=255)
                                                                                                                   tgACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAac                                                                                                 >  2:759311/1‑83 (MQ=255)
                                                                                                                   tgACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAac                                                                                                 <  1:759311/83‑1 (MQ=255)
                                                                                                                   tgACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTg                                                                                             >  2:1776441/1‑87 (MQ=255)
                                                                                                                   tgACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTg                                                                                             <  1:1776441/87‑1 (MQ=255)
                                                                                                                   tgACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCAGGCACCGACCTGGACTACTTCGACGCCCGCGCGGCGGTCGAgg                             <  1:2050504/150‑1 (MQ=255)
                                                                                                                     aCGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCAGGCACCGACCTGGACTACTTCGACGCCCGCGCGGCGGTCGAGGCg                           >  2:1955622/1‑150 (MQ=255)
                                                                                                                      cGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCAGGCACCGACCTGGACTACTTCGACGCCCGCGCGGCGGTCGAGGCGa                          >  1:800887/1‑150 (MQ=255)
                                                                                                                        cattcgcgggcacgcccgctcccACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCAGGCACCGACCTGGACTACTTCGACGCCCGCGCGGCGGTCGAGGCGATc                        <  2:1478545‑M2/127‑1 (MQ=255)
                                                                                                                        cattcgcgggcacgcccgctcccACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCAGGCACCGACCTGGACTACTTCGACGCCCGCGCGGCGGTCGAGGCGATc                        >  1:879616‑M2/24‑150 (MQ=255)
                                                                                                                          ttcgcgggcacgcccgctcccACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCAGGCACCGACCTGGACTACTTCGACGCCCGCGCGGCGGTCGAGGCGATCaa                      <  2:525280‑M2/129‑1 (MQ=255)
                                                                                                                             gcgggcacgcccgctcccACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCAGGCACCGACCTGGACTACTTCGACGCCCGCGCGGCGGTCGAGGCGATCAAGcc                   >  1:837667‑M2/19‑150 (MQ=255)
                                                                                                                               gggcacgcccgctcccACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCAGGCACCGACCTGGACTACTTCGACGCCCGCGCGGCGGTCGAGGCGATCAAGCCCg                 >  2:1151246‑M2/17‑150 (MQ=255)
                                                                                                                                     tcccgctcccACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGCACACGTGTGCTCTCAAGCACCTGCCAGGCACCGACCTGGACTACTTCGACGCCCGCGCGGCGGTCGAGGCGATCAAGCCCGGCGCCt           <  1:1571544‑M2/140‑1 (MQ=255)
                                                                                                                                      cccgctcccACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCAGGCACCGACCTg                                                            <  2:1032715‑M2/91‑1 (MQ=255)
                                                                                                                                      cccgctcccACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCAGGCACCGACCTg                                                            >  1:1032715‑M2/10‑100 (MQ=255)
                                                                                                                                       ccgctcccACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCAGGCACCGACCTGGac                                                         >  2:1375264‑M2/9‑102 (MQ=255)
                                                                                                                                       ccgctcccACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCAGGCACCGACCTGGac                                                         <  1:1375264‑M2/94‑1 (MQ=255)
                                                                                                                                             ccACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCAGGCACCGACCTGGACTACTTCGACGc                                              <  1:2224239‑M2/105‑1 (MQ=255)
                                                                                                                                             ccACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCAGGCACCGACCTGGACTACTTCGACGc                                              >  2:2224239‑M2/3‑107 (MQ=255)
                                                                                                                                             ccACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCAGGCACCGACCTGGACTACTTCGACGCCCGCGCGGCGGTCGAGGCGATCAAGCCCGGCGCCTACGACGGc   >  1:692426‑M2/3‑150 (MQ=255)
                                                                                                                                              cACAGGTACGGTGAAACCTTCCGCCCAACGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCAGGCACCGACCTGGACTACTTCGACGCCCGCGCGGCGGTCGAGGCGATCAAGCCCGGCGCCTACGACGGCt  <  2:879616‑M2/149‑1 (MQ=255)
                                                                                                                                               |                                                                                                                                                     
CGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCAGGCACCGACCTGGACTACTTCGACGCCCGCGCGGCGGTCGAGGCGATCAAGCCCGGCGCCTACGACGGCT  >  NC_002947/2663989‑2664280

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.