Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	5654316	5654383	68	2 [0]	[1] 2	PP_4959	diguanylate cyclase

TCGGCGATCACCGTGATACGGTAGTCGGCGCACAGGCCGATCACGCTGCGAACCAACGCAGCATCTACCGTCGAATCGGGCAGACGTGCCACCAGATGACGGTCAAGCTTG  >  NC_002947/5654205‑5654315                                                                                                               | tCGGCGATCACCGTGATACGGTAGTCGGCGCACAGGCCGATCACGCTGCGAACCAACGCAGCATCTACCGTCGAATCGGGCAGACGTGCCACCAGATGACGGTCAAGCTTg  <  1:174575/111‑1 (MQ=255) tCGGCGATCACCGTGATACGGTAGTCGGCGCACAGGCCGATCACGCTGCGAACCAACGCAGCATCTACCGTCGAATCGGGCAGACGTGCCACCAGATGACGGTCAAGCTTg  >  2:174575/1‑111 (MQ=255)                                                                                                               | TCGGCGATCACCGTGATACGGTAGTCGGCGCACAGGCCGATCACGCTGCGAACCAACGCAGCATCTACCGTCGAATCGGGCAGACGTGCCACCAGATGACGGTCAAGCTTG  >  NC_002947/5654205‑5654315

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑