New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1015848	1 (0.040)	17 (0.700)	12/264	0.5	94.4%	intergenic (‑75/‑693)	SBRG_Ecoli_galE/prfC	SBRG_Ecoli_galE/peptide chain release factor 3
	?	NC_002947	= 4543236	NA (NA)					intergenic (+45/‑275)	PP_4025/PP_4027	transposase/hypothetical protein

CCTGGAGCGACTGCCGCACGCCTCATCGGTAGCAGACTACGAAGCGCTGCTGCCATGGAACTGTTCGCCAGAGATGCCACGGTAACTTTGGCTTCCACCTTGTGGTAGGTGGGGTTCATGGATCGGTTACATATCGTTGGCCTGTGCATGGGCCTGTCGGTGATGGTCGGCGCCTTTTTCGGCGCACGCACGGCGATCAGTGGCGGCAGCAAGTTCATCCGCCCGGTGTTCATCACCGTGGTGCTGGCGTTGA  >  NC_002947/4543107‑4543359                                                                                                                                  |                                                                                                                            ccTGGAGCGACTGCCGCACGCCTCATCGGTAGCAGACTACGAAGCGCTGCTGCCATGGAACTGTTCGCCAGAGATGCCACGGTAACTTTGGCTTCCACCTTGTGGTAGGTGGGGTTCATGGATCGGTTACATATCg                                                                                                                       >  1:479041/1‑136 (MQ=34)   tGGAGCGACTGCCGCAGGCCTCATCGGTAGCAGACTACGAAGCGCTGCTGCCATGGAACTGTTCGCCATAGATGCCACGGTAAGTTTGGCTTCCACCTTGTGGTAGGTGGGGTTCATGGTTCGGTTACATATCGtt                                                                                                                     <  1:338090/136‑1 (MQ=255)   tGGAGCGACTGCCGCACGCCTCATCGGTAGCAGACTACGAAGCGCTGCTGCCATGGAACTGTTCGCCAGAGATGCCACGGTAACTTTGGCTTCCACCTTGTGGTAGGTGGGGTTCATGGATCGGTTACATATCGtt                                                                                                                     <  1:459392/136‑1 (MQ=37)   tGGAGCGACTGCCGCACGCCTCATCGGTAGCAGACTACGAAGCGCTGCTGCCATGGAACTGTTCGCCAGAGATGCCACGGTAACTTTGGCTTCCACCTTGTGGTAGGTGGGGTTCATGGATCGGTTACATATCGtt                                                                                                                     <  2:477923/136‑1 (MQ=37)                                           aGCGCTGCTGCCATGGAACTGTTCGCCAGAGATGCCACGGTAACTTTGGCTTCCACCTTGTGGTAGGTGGGGTTCATGGATCGGTTACATATCGTTGGCCTGTGCATGGGCCTGTCGGTGATGGTCGGCGCCtttt                                                                             >  2:615820/1‑136 (MQ=255)                                           aGCGCTGCTGCCATGGAACTGTTCGCCAGAGATGCCACGGTAACTTTGGCTTCCACCTTGTGGTAGGTGGGGTTCATGGATCGGTTACATATCGTTGGCCTGTGCATGGGCCTGTCGGTGATGGTCGGCGCCtttt                                                                             >  2:612868/1‑136 (MQ=255)                                                 gctgcCATGGAACTGTTCGCCAGAGATGCCACGGTAACTTTGGCTTCCACCTTGTGGTAGGTGGGGTTCATGGATCGGTTACATATCGTTGGCCTGTGCATGGGCCTGTCGGTGATGGTCGGCGCCTTTTTCGgcg                                                                       >  2:248345/1‑136 (MQ=255)                                                   tgcCATGGAACTGTTCGCCAGAGATGCCACGGTAACTTTGGCTTCCACCTTGTGGTAGGTGGGGTTCATGGATCGGTTACATATCGTTGGCCTGTGCATGGGCCTGTCGGTGATGGTCGGCGCCTTTTTCGGcgca                                                                     >  2:168081/1‑136 (MQ=255)                                                     ccATGGAACTGTTCGCCAGAGATGCCACGGTAACTTTGGCTTCCACCTTGTGGTAGGTGGGGTTCATGGATCGGTTACATATCGTTGGCCTGTGCATGGGCCTGTCGGTGATGGTCGGCGCCTTTTTCGGcgcacg                                                                   >  1:330162/1‑136 (MQ=255)                                                             cTGTTCGCCAGAGATGCCACGGTAACTTTGGCTTCCACCTTGTGGTAGGTGGGGTTCATGGATCGGTTACATATCGTTGGCCTGTGCATGGGCCTGTCGGTGATGGTCGGCGCCTTTTTCGGCGCACGCACGGCGa                                                           >  1:46484/1‑136 (MQ=255)                                                                        agaTGCCACGGTAACTTTGGCTTCCACCTTGTGGTAGGTGGGGTTCATGGATCGGTTACATATCGTTGGCCTGTGCATGGGCCTGTCGGTGATGGTCGGCGCCTTTTTCGGCGCACGCACGGCGATCAGTggcggc                                                <  1:615820/136‑1 (MQ=255)                                                                        agaTGCCACGGTAACTTTGGCTTCCACCTTGTGGTAGGTGGGGTTCATGGATCGGTTACATATCGTTGGCCTGTGCATGGGCCTGTCGGTGATGGTCGGCGCCTTTTTCGGCGCACGCACGGCGATCAGTggcggc                                                <  1:612868/136‑1 (MQ=255)                                                                        agaTGCCACGGTAACTTTGGCTTCCACCTTGTGGTAGGTGGGGTTCATGGATCGGTTACATATCGTTGGCCTGTGCATGGGCCTGTCGGTGATGGTCGGCGCCTTTTTCGGCGCACGCACGGCGATCAGTggcggc                                                >  1:316696/1‑136 (MQ=255)                                                                                  gTAACTTTGGCTTCCACCTTGTGGTAGGTGGGGTTCATGGATCGGTTACATATCGTTGGCCTGTGCATGGGCCTGTCGGTGATGGTCGGCGCCTTTTTCGGCGCACGCACGGCGATCAGTGGCGGCAGCAAGTTCa                                      >  1:129086/1‑136 (MQ=255)                                                                                  gTAACTTTGGCTTCCACCTTGTGGTAGGTGGGGTTCATGGATCGGTTACATATCGTTGGCCTGTGCATGGGCCTGTCGGTGATGGTCAGCGCCTTTTTCGGCGCACGCACGGCGATCAGTGGCGGCAGCAAGTTCa                                      >  1:623840/1‑136 (MQ=255)                                                                                                         gTAGGTGGGGTTCATGGATCGGTTACATATCGTTGGCCTGTGCATGGGCCTGTCGGTGATGGTCGGCGCCTTTTTCGGCGCACGCACGGCGATCAGTGGCGGCAGCAAGTTCATCCGCCCGGTGTTCATCACCgtg               <  1:387134/136‑1 (MQ=255)                                                                                                                      aTGGATCGGTTACATATCGTTGGCCTGTGCATGGGCCTGTCGGTGATGGTCGGCGCCTTTTTCGGCGCACGCACGGCGATCAGTGGCGGCAGCAAGTTCATCCGCCCGGTGTTCATCACCGTGGTGCTGGCGTTGa  <  2:307531/136‑1 (MQ=255)                                                                                                                      aTGGATCGGTTACATATCGTTGGCCTGTGCATGGGCCTGTCGGTGATGGTCGGCGCCTTTTTCGGCGCACGCACGGCGATCAGTGGCGGCAGCAAGTTCATCCGCCCGGTGTTCATCACCGTGGTGCTGGCGTTGa  <  2:479041/136‑1 (MQ=255)                                                                                                                                  |                                                                                                                            CCTGGAGCGACTGCCGCACGCCTCATCGGTAGCAGACTACGAAGCGCTGCTGCCATGGAACTGTTCGCCAGAGATGCCACGGTAACTTTGGCTTCCACCTTGTGGTAGGTGGGGTTCATGGATCGGTTACATATCGTTGGCCTGTGCATGGGCCTGTCGGTGATGGTCGGCGCCTTTTTCGGCGCACGCACGGCGATCAGTGGCGGCAGCAAGTTCATCCGCCCGGTGTTCATCACCGTGGTGCTGGCGTTGA  >  NC_002947/4543107‑4543359

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.