New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 10158482 (0.180)8 (0.730) 6/264 0.4 80.0% intergenic (‑75/‑693) SBRG_Ecoli_galE/prfC SBRG_Ecoli_galE/peptide chain release factor 3
?NC_002947 = 4543236 NA (NA)intergenic (+45/‑275) PP_4025/PP_4027 transposase/hypothetical protein

TCCTGGAGCGACTGCCGCACGCCTCATCGGTAGCAGACTACGAAGCGCTGCTGCCATGGAACTGTTCGCCAGAGATGCCACGGTAACTTTGGCTTCCACCTTGTGGTAGGTGGGGTTCATGGATCGGTTACATATCGTTGGCCTGTGCATGGGCCTGTCGGTGATGGTCGGCGCCTTTTTCGGCGCACGCACGGCGATCAGTGGCGGCAGCAAGTTCATCCGCCCGGTGTTCATCACCGTGGTGCTGGCGTTGACCGTGCGCT  >  NC_002947/4543106‑4543368
                                                                                                                                  |                                                                                                                                    
tCCTGGAGCGTCTGCCGCACGCCTCATCGGTAGCAGACTACGAAGCGCTGCTGCCATGGAACTGTTCGCCAGAGATGCCACGGTAACTTTGGCTTCCACCTTGTGGTAGGTGGGGTTCATGGATCGGTTACATATc                                                                                                                                 <  2:113251/136‑1 (MQ=18)
                                         gAAGCGCTGCTGCCATGGAACTGTTCGCCAGAGATGCCACGGTAACTTTGGCTTCCACCTTGTGGTAGGTGGGGTTCATGGATCGGTTACATATCGTTGGCCTGTGCATGGGCCTGTCGGTGATGGTCGGCGCCtt                                                                                        >  1:241851/1‑136 (MQ=255)
                                              gctgctGCCATGGAACTGTTCGCCAGAGATGCCACGGTAACTTTGGCTTCCACCTTGTGGTAGGTGGGGTTCATGGATCGGTTACATATCGTTGGCCTGTGCATGGGCCTGTCGGTGATGGTCGGCGCCTTTTTCg                                                                                   >  2:18277/1‑136 (MQ=255)
                                                                                                         gTAGGTGGGGTTCATGGATCGGTTACATATCGTTGGCCTGTGCATGGGCCTGTCGGTGATGGTCGGCGCCTTTTTCGGCGCACGCACGGCGATCAGTGGCGGCAGCAAGTTCATCCGCCCGGTGTTCATCACCgtg                        <  1:18277/136‑1 (MQ=255)
                                                                                                         gTAGGTGGGGTTCATGGATCGGTTACATATCGTTGGCCTGTGCATGGGCCTGTCGGTGATGGTCGGCGCCTTTTTCGGCGCACGCACGGCGATCAGTGGCGGCAGCAAGTTCATCCGCCCGGTGTTCATCACCgtg                        <  2:265588/136‑1 (MQ=255)
                                                                                                                gggTTCATGGATCGGTTACATATCGTTGGCCTGTGCATGGGCCTGTCGGTGATGGTCGGCGCCTTTTTCGGCGCACGCACGGCGATCAGTGGCGGCAGCAAGTTCATCCGCCCGGTGTTCATCACCGTGGTGCTgg                 >  2:201874/1‑136 (MQ=255)
                                                                                                                    tCATGGATCGGTTACATATCGTTGGCCTGTGCATGGGCCTGTCGGTGATGGTCGGCGCCTTTTTCGGCGCACGCACGGCGATCAGTGGCGGCAGCAAGTTCATCCGCCCGGTGTTCATCACCGTGGTGCTGGCGtt             >  2:269068/1‑136 (MQ=255)
                                                                                                                               ttACATATCGTTGGCCTGTGCATGGGCCTGTCGGTGATGGTCGGCGCCTTTTTCGGCGCACGCACGGCGATCAGTGGCGGCAGCAAGTTCATCCGCCCGGTGTTCATCACCGTGGTGCTGGCGTTGACCGTGCGCt  <  2:241851/136‑1 (MQ=255)
                                                                                                                                  |                                                                                                                                    
TCCTGGAGCGACTGCCGCACGCCTCATCGGTAGCAGACTACGAAGCGCTGCTGCCATGGAACTGTTCGCCAGAGATGCCACGGTAACTTTGGCTTCCACCTTGTGGTAGGTGGGGTTCATGGATCGGTTACATATCGTTGGCCTGTGCATGGGCCTGTCGGTGATGGTCGGCGCCTTTTTCGGCGCACGCACGGCGATCAGTGGCGGCAGCAAGTTCATCCGCCCGGTGTTCATCACCGTGGTGCTGGCGTTGACCGTGCGCT  >  NC_002947/4543106‑4543368

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.