New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1015841 =39 (0.090)471 (1.040) 179/286 0.3 92.3% intergenic (‑68/‑700) SBRG_Ecoli_galE/prfC SBRG_Ecoli_galE/peptide chain release factor 3
?NC_002947 4541196 = NA (NA)intergenic (+730/‑85) PP_4022/PP_4024 hypothetical protein/transposase

Only 100 of 971 total aligned reads displayed.

TGACATCATGACCGTTTTGCAGTAATTGCACACAGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGGAATCGTTTACACAAGAATTTAGCCGTTTTTTATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGG  >  NC_002947/1015692‑1015990
                                                                                                                                                     |                                                                                                                                                     
tgaCATCATGACCGTTTTGCAGTAATTGCACACAGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATg                                                                                                                                                       <  1:8163302/150‑1 (MQ=255)
  aCATCATGACCGTTTTGCAGTAATTGCACACAGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGa                                                                                                                                                     <  1:9944365/150‑1 (MQ=255)
   gaaagtccacgggcttggggtagaggtagactttttcgactttgctgtcggggcgcatcatggcgggctggctccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGaa                                                                                                                                                    <  1:2775631‑M1/4‑1 (MQ=255)
   catcatGACCGTTTTGCAGTAATTGCACACAGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGaa                                                                                                                                                    >  1:9027617/1‑150 (MQ=255)
     tcatGACCGTTTTGCAGTAATTGCACACAGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATa                                                                                                                                                  >  2:8915894/1‑150 (MQ=255)
       atGACCGTTTTGCAGTAATTGCACACAGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATaaa                                                                                                                                                <  2:529738/150‑1 (MQ=255)
       atGACCGTTTTGCAGTAATTGCACACAGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATaaa                                                                                                                                                >  2:6550395/1‑150 (MQ=255)
        tccacgggcttggggtagaggtagactttttcgactttgctgtcggggcgcatcatggcgggctggctccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAATAAAt                                                                                                                                               <  1:210789‑M1/9‑1 (MQ=255)
        tGACCGTTTTGCAGTAATTGCACACAGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAAg                                                                                                                                               <  2:2648900‑M1/150‑2 (MQ=255)
         gACCGTTTTGCAGTAATTGCACACAGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACCAAGATGCGAAAAGTGTGACATGGAATAAAgt                                                                                                                                              >  1:7635106‑M1/1‑148 (MQ=255)
         ccacgggcttggggtagaggtagactttttcgactttgctgtcggggcgcatcatggcgggctggctccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAATAAAtt                                                                                                                                              <  1:7894614‑M1/10‑1 (MQ=255)
         ccacgggcttggggtagaggtagactttttcgactttgctgtcggggcgcatcatggcgggctggctccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAATAAAtt                                                                                                                                              <  2:5875806‑M1/10‑1 (MQ=255)
         ccacgggcttggggtagaggtagactttttcgactttgctgtcggggcgcatcatggcgggctggctccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAATAAAtt                                                                                                                                              <  2:6253927‑M1/10‑1 (MQ=255)
          cacgggcttggggtagaggtagactttttcgactttgctgtcggggcgcatcatggcgggctggctccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAATAAATTa                                                                                                                                             >  1:3263423‑M1/140‑150 (MQ=255)
             gggcttggggtagaggtagactttttcgactttgctgtcggggcgcatcatggcgggctggctccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAATAAATTAGTg                                                                                                                                          >  1:8704561‑M1/137‑150 (MQ=255)
                cttggggtagaggtagactttttcgactttgctgtcggggcgcatcatggcgggctggctccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAATAAATTAGTGGaa                                                                                                                                       <  1:540796‑M1/17‑1 (MQ=255)
                      gtagaggtagactttttcgactttgctgtcggggcgcatcatggcgggctggctccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAATAAATTAGTGGAATCGttt                                                                                                                                 >  2:382903‑M1/128‑150 (MQ=255)
                       tagaggtagactttttcgactttgctgtcggggcgcatcatggcgggctggctccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAATAAATTAGTGGAATCGTTTa                                                                                                                                >  1:2269038‑M1/127‑150 (MQ=255)
                       aaTTGCACACAGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAAgtaaccgatccatgaa                                                                                                                                <  1:3536072‑M1/150‑17 (MQ=255)
                         gaggtagactttttcgactttgctgtcggggcgcatcatggcgggctggctccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAATAAATTAGTGGAATCGTTTaca                                                                                                                              <  2:1382047‑M1/26‑1 (MQ=255)
                             tagactttttcgactttgctgtcggggcgcatcatggcgggctggctccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAATAAATTAGTGGAATCGTTTACACAAg                                                                                                                          <  2:8565293‑M1/30‑1 (MQ=255)
                               gactttttcgactttgctgtcggggcgcatcatggcgggctggctccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAATAAATTAGt                                                                                                                                           >  2:255047‑M1/119‑131 (MQ=255)
                                caGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAAgtaaccgatccatgaaccccaccta                                                                                                                       <  1:610538‑M1/150‑26 (MQ=255)
                                   ttttcgactttgctgtcggggcgcatcatggcgggctggctccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAATAAATTAGTGGAATCGTTTACACAAGAATTTa                                                                                                                    >  1:9116930‑M1/115‑150 (MQ=255)
                                   ttttcgactttgctgtcggggcgcatcatggcgggctggctccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAATAAATTAGTGGAATCGTTTACACAAGAATTTa                                                                                                                    >  2:1969145‑M1/115‑150 (MQ=255)
                                   ttttcgactttgctgtcggggcgcatcatggcgggctggctccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAATAAATTAGTGGAATCGTTTACACAAGAATTTa                                                                                                                    >  2:2143545‑M1/115‑150 (MQ=255)
                                      tGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAAgtaaccgatccatgaaccccacctaccacaa                                                                                                                 <  1:8399995‑M1/150‑32 (MQ=255)
                                      tGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAAgtaaccgatccatgaaccccacctaccacaa                                                                                                                 >  2:8393132‑M1/1‑119 (MQ=255)
                                          ttCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAAgtaaccgatccatgaaccccacctaccacaaggtg                                                                                                             >  2:9599738‑M1/1‑115 (MQ=255)
                                          ttCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAAgtaaccgatccatgaaccccacctaccacaaggtg                                                                                                             >  2:751175‑M1/1‑115 (MQ=255)
                                             cAATGTAACCGCTACCACCGGTAACCATAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAAgtaaccgatccatgaaccccacctaccacaaggtggaa                                                                                                          <  2:8228308‑M1/150‑39 (MQ=255)
                                             cAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAAgtaaccgatccatgaaccccacctaccacaaggtggaa                                                                                                          <  1:5136166‑M1/150‑39 (MQ=255)
                                              aaTGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAAgtaaccgatccatgaaccccacctaccacaaggtggaag                                                                                                         >  2:4740823‑M1/1‑111 (MQ=255)
                                                tgtcggggcgcatcatggcgggctggctccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAATAAATTAGTGGAATCGTTTACACAAGAATTTAGCCGTTTTTTATg                                                                                                       <  1:3010982‑M1/49‑1 (MQ=255)
                                                   aaCCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaa                                                                                                    >  1:2649497‑M1/1‑106 (MQ=255)
                                                   aaCCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaa                                                                                                    <  1:8029550‑M1/150‑45 (MQ=255)
                                                    aCCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaag                                                                                                   >  2:3057384‑M1/1‑105 (MQ=255)
                                                         tACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttacc                                                                                              >  1:3759879‑M1/1‑100 (MQ=255)
                                                         tACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttacc                                                                                              >  1:407476‑M1/1‑100 (MQ=255)
                                                         gcatcatggcgggctggctccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAATAAATTAGTGGAATCGTTTACACAAGAATTTAGCCGTTTTTTATGCGCGATTaa                                                                                              <  2:9122635‑M1/58‑1 (MQ=255)
                                                            tcatggcgggctggctccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAATAAATTAGTGGAATCGTTTACACAAGAATTTAGCCGTTTTTTATGCGCGATTAAGTg                                                                                           <  1:10134904‑M1/61‑1 (MQ=255)
                                                             catgtcgggctggctccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatccctttcGGAATAAATTAGTGGAATCGTTTACACAAGAATTTAGCCGTTTTTTATGCGCGATTAAGTGa                                                                                          >  1:9740446‑M1/89‑150 (MQ=255)
                                                             accGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtgg                                                                                          <  2:9809285‑M1/150‑55 (MQ=255)
                                                             accGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtgg                                                                                          >  1:4814876‑M1/1‑96 (MQ=255)
                                                                   gggctggctccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAATAAATTAGTGGAATCGTTTACACAAGAATTTAGCCGTTTTTTATGCGCGATTAAGTGATTATaa                                                                                    <  2:4131820‑M1/68‑1 (MQ=255)
                                                                      cAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAAgtaaccgatccatgaacc                                                                                                                              >  1:3901381‑M1/1‑87 (MQ=255)
                                                                       tggctccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAATAAATTAGTGGAATCGTTTACACAAGAATTTAGCCGTTTTTTATGCGCGATTAAGTGATTATAAAACa                                                                                <  2:10074257‑M1/72‑1 (MQ=255)
                                                                             ctcATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAAgtaaccgatccatgaaccccacctac                                                                                                                      <  2:4378215‑M1/106‑27 (MQ=255)
                                                                              tcATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaacagt                                                                         >  1:7766548‑M1/1‑79 (MQ=255)
                                                                              tcATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAAgtaaccgat                                                                                                                                       >  1:7234658‑M1/1‑79 (MQ=255)
                                                                              agaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAATAAATTAGTGGAATCGTTTACACAAGAATTTAGCCGTTTTTTATGCGCGATTAAGTGATTATAAAACAGAGGGtt                                                                         <  1:1108269‑M1/79‑1 (MQ=255)
                                                                              agaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAATAAATTAGTGGAATCGTTTACACAAGAATTTAGCCGTTTTTTATGCGCGATTAAGTGATTATAAAACAGAGGGtt                                                                         <  1:1852841‑M1/79‑1 (MQ=255)
                                                                               gaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAATAAATTAGTGGAATCGTTTACACAAGAATTTAGCCGTTTTTTATGCGCGATTAAGTGATTATAAAACAGAGGGttt                                                                        >  2:3977515‑M1/71‑150 (MQ=255)
                                                                                aaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAATAAATTAGTGGAATCGTTTACACAAGAAtt                                                                                                                      >  1:6550807‑M1/70‑103 (MQ=255)
                                                                                 cataaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAATAAATTAGTGGAATCGTTTACACAATAATTTAGCCGTTTTTTATGCGCGATTAAGTGATTATAAAACAGAGGGTTTat                                                                      >  2:7913732‑M1/69‑150 (MQ=255)
                                                                                 aagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAATAAATTAGTGGAATCGTTTACACAAGAATTTAGCCGTTTTTTATGCGCGATTAAGTGATTATAAAACAGAGGGTTTat                                                                      <  2:6037646‑M1/82‑1 (MQ=255)
                                                                                   aTTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaacagttccat                                                                    <  2:7338410‑M1/150‑77 (MQ=255)
                                                                                       tcgtgagcacagcatagggaatcaggtggacggttgtaatgtggggatgatggatcccttacGGAATAAATTAGTGGAATCGTTTACACAAGAATTTAGCCGTTTTTTATGCGCGATTAAGTGATTATAAAACAGAGGGTTTatgaatga                                                                <  2:4638927‑M1/88‑1 (MQ=255)
                                                                                       gCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaacagttccatggca                                                                >  2:3670594‑M1/1‑70 (MQ=255)
                                                                                         tCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaacagttccatggcagc                                                              >  1:858127‑M1/1‑68 (MQ=255)
                                                                                         tCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAAgtaaccgatcc                                                                                                                                     >  2:6394845‑M1/1‑68 (MQ=255)
                                                                                            agcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAATAAATTAGTGGAATCGTTTACACAAGAATTTAGCCGTTTTTTATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTgcg                                                           <  2:8650769‑M1/93‑1 (MQ=255)
                                                                                            aTTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaacagttccatggcagcagc                                                           >  2:2202669‑M1/1‑65 (MQ=255)
                                                                                            aTTAGGCTTATGGTATGAAATAACCAAAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaacagttccatggcagcagc                                                           >  2:7805752‑M1/1‑65 (MQ=255)
                                                                                             ttAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaacagttccatggcagcagcg                                                          >  2:7211064‑M1/1‑64 (MQ=255)
                                                                                                ggCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaacagttccat                                                                    <  1:10005535‑M1/137‑77 (MQ=255)
                                                                                                  gcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAATAAATTAGTGGAATCGTTTa                                                                                                                                >  1:3362852‑M1/52‑75 (MQ=255)
                                                                                                  cTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaacagttccatggcagcagcgcttcg                                                     <  1:9485271‑M1/150‑92 (MQ=255)
                                                                                                   ttATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAAgtaaccgatccatgaaccccac                                                                                                                          <  2:2828697‑M1/80‑23 (MQ=255)
                                                                                                    tATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaacagttccatggcagcagcgcttcgta                                                   <  1:4351020‑M1/150‑94 (MQ=255)
                                                                                                    tATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaacagttccatggcagcagcgcttcgta                                                   <  1:7453308‑M1/150‑94 (MQ=255)
                                                                                                    tATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaacagttccatggcagcagcgcttcgta                                                   <  1:1278114‑M1/150‑94 (MQ=255)
                                                                                                    atcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAATAAATTAGTGGAATCGTTTACACAAGAATTTAGCCGTTTTTTATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTAt                                                   >  2:9195930‑M1/50‑150 (MQ=255)
                                                                                                    atcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAATAAATTAGTGGAATCGTTTACACAAGAATTTAGCCGTTTTTTATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTAt                                                   >  1:1031172‑M1/50‑150 (MQ=255)
                                                                                                     tcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAATAAATTAGTGGAATCGTTTACACAAGAATTTAGCCGTTTTTTATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATc                                                  >  2:6695109‑M1/49‑150 (MQ=255)
                                                                                                      tGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaacagttccatggcagcagcgcttcgtagt                                                 >  2:352623‑M1/1‑55 (MQ=255)
                                                                                                      cgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAATAAATTAGTGGAATCGTTTACACAAGAATTTAGCCGTTTTTTATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCt                                                 >  1:5937203‑M1/48‑150 (MQ=255)
                                                                                                             aaaTAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaacagttccatggctgcagcgcttcgtagtctgctac                                          <  1:4977593‑M1/150‑103 (MQ=255)
                                                                                                               aTAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaacagttccatggcagcagcgcttcgtagtctgctaccg                                        >  2:5727160‑M1/1‑46 (MQ=255)
                                                                                                               aTAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaacagttccatggcagcagcgcttcgtagtctgctaccg                                        >  1:1678747‑M1/1‑46 (MQ=255)
                                                                                                                gtggacggttggaatgtggggatgatggatcccttacGGAATAAATTAGTGGAATCGTTTACACAAGAATTTa                                                                                                                    <  1:6737596‑M1/36‑1 (MQ=255)
                                                                                                                 tggacggttggaatgtggggatgatggatcccttacGGAATAAATTAGTGGAATCGTTTACACAAGAATTTAGCCGTTTTTTATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGAcg                                      <  1:5687675‑M1/114‑1 (MQ=255)
                                                                                                                  ggacggttggaatgtggggatgatggatcccttacGGAATAAATTAGTGGAATCGTTTACACAAGAATTTAGCCGTTTTTTATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGAcgc                                     >  1:9363567‑M1/36‑150 (MQ=255)
                                                                                                                    cATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAAgtaaccgatccatgaaccccacctaccacaaggtggaa                                                                                                          >  2:233431‑M1/1‑41 (MQ=255)
                                                                                                                      ggttggaatgtggggatgatggatcccttacGGAATAAATTAGTGGAATCGTTTACACAAGAATTTAGCCGTTTTTTATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGtt                                 >  1:6364965‑M1/32‑150 (MQ=255)
                                                                                                                         tggaatgtggggatgatggatcccttacGGAATAAATTAGTGGAATCGTTTACACAAGAATTTAGCCGTTTTTTATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCa                              >  2:3267995‑M1/29‑150 (MQ=255)
                                                                                                                           tAACAAAGATGCGAAAAGTGTGACATGGAATAAAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaacagttccatggcagcagcgcttcgtagtctgctaccgatgaggcgtgcg                            <  1:7043126‑M1/150‑117 (MQ=255)
                                                                                                                             aCAAAGATGCGAAAAGTGTGACATGGAATAAAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaacagttccatggcagcagcgcttcgtagtctgctaccgatgaggcgtgcggc                          >  1:6249122‑M1/1‑32 (MQ=255)
                                                                                                                               aaaGATGCGAAAAGTGTGACATGGAATAAAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaacagttccatggcagcagcgcttcgtagtctgctaccgatgaggcgtgcggcag                        >  1:6464855‑M1/1‑30 (MQ=255)
                                                                                                                                aaGATGCGAAAAGTGTGACATGGAATAAAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaacagttccatggcagcagcgcttcgtagtctgctaccgatgaggc                                 <  2:10252252‑M1/140‑112 (MQ=255)
                                                                                                                                  gggatgatggatcccttacGGAATAAATTAGTGGAATCGTTTACACAAGAATTTAGCCGTTTTTTATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCAt                     <  2:4864644‑M1/131‑1 (MQ=255)
                                                                                                                                   aTGCGAAAAGTGTGACATGGAATAAAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaacagttccatggcagcagcgcttcgtagtctgctaccgatgaggcgtgcggcagtcgc                    >  2:692048‑M1/1‑26 (MQ=255)
                                                                                                                                           gatcccttacGGAATAAATTAGTGGAATCGTTTACACAAGAATTTAGCCGTTTTTTATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAAc            <  2:5091214‑M1/140‑1 (MQ=255)
                                                                                                                                            gtgtGACATGGAATAAAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaacagttccatggcagcagcgcttcgtagtctgctaccgatgaggcgtgcggcagtcgctccaggacg           >  2:1811102‑M1/1‑17 (MQ=255)
                                                                                                                                             tgtgACATGGAATAAAgtaaccgatccatgaaccccacctaccacaaggtggaa                                                                                                          >  2:1638936‑M1/1‑16 (MQ=255)
                                                                                                                                               tgACATGGAATAAAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaacagttccatggcagcagcgcttcgtagtctgctaccgatgaggcgtgcggcagtcgctccaggacgtgg        >  2:5470854‑M1/1‑14 (MQ=255)
                                                                                                                                                gACATGGAATAAAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaacagttccatggcagcagcgcttcgtagtctgctaccgatgaggcgtgcggcagtcgctccaggacgtggc       >  1:4569993‑M1/1‑13 (MQ=255)
                                                                                                                                                 ttacGGAATAAATTAGTGGAATCGTTTACACAAGAATTTAGCCGTTTTTTATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTgg      <  1:2541009‑M1/146‑1 (MQ=255)
                                                                                                                                                   aTGGAATAAAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaacagttccatggcagcagcgcttcgtagtctgctaccgatgaggcgtgcggcagtcgctccaggacgtggcgca    >  2:1098230‑M1/1‑10 (MQ=255)
                                                                                                                                                   aTGGAATAAAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaacagttccatggcagcagcgcttcgtagtctgctaccgatgaggcgt                               >  2:9390917‑M1/1‑10 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
TGACATCATGACCGTTTTGCAGTAATTGCACACAGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGGAATCGTTTACACAAGAATTTAGCCGTTTTTTATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGG  >  NC_002947/1015692‑1015990

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.