| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1316674 | 374 (1.000) | 29 (0.090) | 16/250 | NT | 7.5% | intergenic (‑187/+91) | PP_1144/rapA | membrane protein/RNA polymerase‑associated protein RapA |
| ? | NC_002947 | = 1316733 | 377 (1.110) | intergenic (‑246/+32) | PP_1144/rapA | membrane protein/RNA polymerase‑associated protein RapA | |||||
Only 100 of 515 total aligned reads displayed.
ACAACCCTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATG‑CCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTG > NC_002947/1316525‑1316823 | aCAACCCTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGC < 2:8251734‑M1/150‑1 (MQ=255) cAACCCTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTAAGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCg > 2:7366526/1‑150 (MQ=255) aCCCTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAg > 2:2928197/1‑150 (MQ=255) cccTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAgg > 1:5422746/1‑149 (MQ=255) ccTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAggc > 1:6107585/1‑148 (MQ=255) ccTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGcc > 2:6256598/1‑150 (MQ=255) cTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAg < 1:165836/147‑1 (MQ=255) tgtgCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGGCcg > 1:27435/1‑150 (MQ=255) cAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGTAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGaa < 1:4105617/150‑1 (MQ=255) cAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGaa < 2:1523155/150‑1 (MQ=255) cAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGaa < 1:7762294/150‑1 (MQ=255) cAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGaa < 1:7205455/150‑1 (MQ=255) cAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGaa < 1:4256044/150‑1 (MQ=255) cgtcctacAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGc < 2:5199913/143‑1 (MQ=255) cTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCtcgcccgctcccaca < 1:1243477‑M1/150‑16 (MQ=255) tGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCaac > 2:8024208/1‑148 (MQ=255) tGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATc < 2:8500945/150‑1 (MQ=255) tCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGGCCGCCCAGCaaaac > 1:3891110/1‑146 (MQ=255) tCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCa < 2:8337270/150‑1 (MQ=255) ggCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCAAGCACTGCgg > 2:4133213/1‑150 (MQ=255) gCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGt < 2:4756885/150‑1 (MQ=255) gTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCacgcccgcgaacaccggcaaagccggtg < 1:5798797‑M1/150‑29 (MQ=255) gTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGa < 2:2635828/150‑1 (MQ=255) tataGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACGCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGAt < 2:4549727/150‑1 (MQ=255) ggaaggaGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAACTTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATG‑CCa < 1:6263381/150‑1 (MQ=255) aggaGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATG‑CCACCg < 2:5939871/150‑1 (MQ=255) ggaGTACTTAAGCCTTCCTGACTATGGGCACAATGATTTCTACGATTTGGTTATCACTCCAATCGCAGTGAGGAATAACTTTGGGGCCCTACTGCCTTCCTGTGGGCGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATG‑CCACCgg < 1:4867878/150‑1 (MQ=255) gaGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGCAGCAACCACATCGGTGGATG‑CCaaccgc > 1:7963022/1‑145 (MQ=255) gaGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAGGCATCCACCGCAGTGGATG‑cttcgcgg < 2:3002683/150‑8 (MQ=255) tACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGCTTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTACTGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATG‑CCACCGGCttt < 2:6095223/150‑1 (MQ=255) ttAAGCCTTCCTGACTAATGGCACAATTATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGCGCCCGCGAAGCATCCACTGCGGTGGATG‑CCACCGGCTTTGcc < 1:6029774/150‑1 (MQ=255) ttAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACAGCGGTGGATG‑CCCCCGGCTTTGcc > 2:1234949/1‑150 (MQ=255) ttAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCCCAGCAAACACAGCGGGGGATG‑CCACCCGCGTTTcc > 1:691669/1‑150 (MQ=255) ttAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCAAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGACG‑CCACCGGCTTTGcc > 2:3517481/1‑150 (MQ=255) tAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCacgcccgcgaacaccggcaaagccggtggcatccaccgcagtgga < 1:2022083‑M1/150‑46 (MQ=255) tAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATG‑CCACCGGCTTTGCCg < 2:6411413/150‑1 (MQ=255) aaGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGGCCGCGCAGCAACCAAAGCGGGGGGTG‑GCACCCGCGTTggccg > 1:318773/1‑146 (MQ=255) gCCTTCCTGACTAATGGTACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATG‑CCACCGGCAAAGCCGgtt < 2:3688191/150‑2 (MQ=255) gCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCCCGAAGCATCCACGGCGGTGGCTG‑CCACCGGCGTTGCCgggg > 2:5325995/1‑148 (MQ=255) gCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACACCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGCGCCCGCGAAGCATCCACTGCGGTGGATG‑CCACCGGCTTTGCCGgtg < 1:890095/150‑1 (MQ=255) ccttccttACTAATGGCACAATGATTTCTACGATTTGGTTATCACTCCATTCGCTTTGAGTAATAATTTTGGGTCCCTAATGCCTTCCTGTGGTAGCGGGCGAGCCCGCGAAGCATCCACTGCGTTGGATG‑CCACCGGCTTTGCCGgtgt < 1:1007003/150‑1 (MQ=38) ccTTCCTGACTAATGGCACAATGATTTCTCCGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATG‑CCACCGGCTTTGCCGgtgt < 1:8601889/150‑1 (MQ=255) ccTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATG‑CCACCGGCTTTGCCGgtgt < 2:1113794/150‑1 (MQ=255) ccTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGGGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATG‑CCACCGGCAAAGCCGgtgg < 1:7544077/150‑2 (MQ=255) cttcttGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATG‑CCACCGGCAAAGCCGgtggc < 2:7516627/150‑3 (MQ=255) ttCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATTACTCCCATCGCAGTTAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCTCGCCCGCGAAGCATCCACTGCGGTGGATG‑CCACCGGCTTTGCCGGTGTTc < 2:8744893/150‑1 (MQ=38) ttCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGCAGCATCCACAGCGGTGGGTG‑CCCCCCGCGTTGACGGTGTTc > 2:6920354/1‑150 (MQ=255) ccTGAATAATGGCACAATTATTTCTACTTTTTTTTTATAACTCCAATCGCAGTGAGTAATAATTTGGGGGCCATAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATG‑CCACCGGCTTTGCCGGTGTTcgc < 1:4544145/150‑1 (MQ=37) cTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGCAGCATACACAGCGGTGGATG‑CCACCCGCATTTCCGGTGTTggcg > 2:1616044/1‑150 (MQ=255) tGACTAATGGCACAATGATTTCTACGTTTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATG‑CCACCGGCTTTGCCGGTGTTCGCgg < 1:6682193/150‑1 (MQ=255) tGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCacgcccgcgaacaccggcaaagccggtggcatccaccgcagtggatgcttcgcgg < 1:5048791‑M1/150‑56 (MQ=255) tGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCCCCCACCAACCACAGCCGGGGATG‑CCACCCGCGTTGCCGGGGTTCGCgg > 2:3205675/1‑150 (MQ=255) tGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCCCCAAGCAACCACAGCCGGGGATG‑CCAACCGCATTTACCGTGTTCGCgg > 2:7889120/1‑150 (MQ=255) gACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCgcgcccgcgaacaccggcaaagccggtggcatccaccgcagtggatgcttcgcggg < 1:3735095‑M1/150‑57 (MQ=255) aCTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATG‑CCACCGGCTTTGCCGGTGTTCGCGGGc < 2:2721992/150‑1 (MQ=255) tAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCacgcccgcgaacaccggcaaagccggtggcatccaccgcagtggatgcttcgcgggctc < 2:2865927‑M1/150‑60 (MQ=255) tAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCAACCACAGCGGGGGGTG‑CCACCGGCGTTGCCGGTGTTAGCGGGCGt > 1:6561972/1‑150 (MQ=255) ggCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATG‑CCACCGGCTTTGCCGGTGTTCGCGGGCGTgccc > 1:1736334‑M2/1‑146 (MQ=255) gCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCCCGAAGCAACCACTGCGGGGGGTG‑CCACCCGCATTGCCGGTGTTCGCGGGCCTgcccg < 2:7008519‑M2/150‑6 (MQ=255) caATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCCCGAAGCAAAAACAGCGGTGGATT‑CCAACCGCGTTTGCGGTGTTAGCGGGCGTgcccccac < 2:1782402‑M2/150‑9 (MQ=255) tGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGGCCCCGCATCAACCACAGCGGTGGTTG‑GCACCCGCGTTTGCGGGGTTTGCGGGGGGGGCCGCGCCca > 2:2264931/1‑150 (MQ=255) tGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCCAAGCAAACACAGCCGTGGATG‑CCACCCGCGTTTCCGGTGTTGGCGGGCGTgccccctcccc < 2:5478845‑M2/150‑12 (MQ=255) aTTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCCCGAAGCAACCACAGCGGGGGGTG‑CCCCCCGCGTTTCCGGGGTTAGCGGGCGGgcccccacccaca < 1:1447521‑M2/150‑14 (MQ=255) tttCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATG‑CCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACaa < 1:7316707/150‑1 (MQ=255) tttCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCCAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCAAACACAGCGGTGGATT‑CCACCCGCGTTGCCGGTGTTAGCGGGCGTGCCCGCTCCCACaa > 2:723888/1‑150 (MQ=38) tACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGGGGAGCATCCACTGCGGGGGGTG‑CCCCCCGCGTTTCCGGTGGTCGCGGGGGTGGCCGCACCCACAAaggg > 2:1925573/1‑150 (MQ=255) aTTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATG‑CCACCCGCTTTGCCGGTGTTCGCGGGCGTGCCCGCACCCCCAAGGGGcgcg > 2:3559713/1‑150 (MQ=255) aTTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCCCCAACCAAACACAGCGGTGGTTT‑GCAACCCCCTTGCCGGTTTTAGCGGGCGTGCCCCCGCCCACCAAGGGcgcg > 1:3602266/1‑150 (MQ=255) tttGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAGGCATCCACCGCAGTGGATG‑cttc < 1:1757688/102‑4 (MQ=39) ttgggTTATAACGCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATG‑CCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCgg < 2:8662755/147‑1 (MQ=255) ggTTATACCTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATG‑CCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGc < 2:7759930/150‑1 (MQ=255) gTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGGCCCCCCACCAAACACAGCGGTGGGTGCCCACCCCCTTTACC‑GTGTTGGCGGGCGGGCCCCCGACCCCAAAGGGCGCCGGGcc > 1:526832/1‑150 (MQ=255) ataACTCCAATCGCCGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGGGGATG‑CCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTgc < 1:8211331/150‑1 (MQ=255) ataACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGGAGCAACCACTGCGGGGGATT‑CCACCCGCGTTGCCGGTGTTCGCGGGCGTGGCCGCGCCCCCCACGGGCGCGGGGCCGgc > 2:4876324/1‑150 (MQ=37) ataACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCAACCACAGCGGTGGATG‑CCCCCCGCGTTTCCGGGGTTCGCGGGCGTGCCCCCTCCCACAAGGGGCGCGGGGCCGgc > 2:3275649/1‑150 (MQ=38) cTCCACTCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATG‑CCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTa < 2:2529795/150‑1 (MQ=255) cTCCAATCGCAGTGAGTAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATG‑CCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTa < 1:3487757/150‑1 (MQ=255) tCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGCAGCATCCACAGCGGGGGATT‑GCACCCGCGGTTCCGGTGTTCGCGGGCGTGCCCGCGCCCCCCAGGGGCGCGGGGCCAGCGCTag > 2:6658031/1‑150 (MQ=255) aTCGCTGTTAGTAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGGGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATG‑CCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGAGCGCAGGCCCCgcgccccttgt < 1:2494341/150‑8 (MQ=25) gCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATG‑CCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAgccagcca < 1:8764228/150‑1 (MQ=255) ctgTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATG‑CCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGccac < 2:782790/148‑1 (MQ=255) ccgTGAGGAATAAATTTGGGGCCCCAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATG‑CCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGccac < 1:4220798/148‑1 (MQ=255) gtgtGGAATAATTTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATG‑CCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGccacca < 1:2648625/150‑1 (MQ=255) aataatTTTGGGGCCCTATGGCCTTCGTGGGGGCGGGGGCGAGCCCGCGAAGCATCCACGGCGGGGGATG‑CCACCGGCTTGGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCAcgc < 1:2199093/150‑1 (MQ=37) aaTAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCCCGAACCAAACACTGCGGTGGATT‑CCACCCGCATTTCCCGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCAGCGCAAGCCAGCCACCACCAcgc > 2:5705854/1‑150 (MQ=255) aTTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATG‑CCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATg < 2:6511214/150‑1 (MQ=255) aTTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATG‑CCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATg < 2:8204087/150‑1 (MQ=255) aTGCCTTCCGGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATG‑CCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCa < 2:2066416/150‑1 (MQ=255) cTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATG‑CCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGggc < 2:4416531/150‑1 (MQ=255) ttCCTGTGGGAGCGGGCGAGCCCCCCTAGCAACCACAGCCGTGGCTT‑CCCCCCGCGTTGCCGGGGTTCGCGGGCCTGCCCCCTCCCCCAACGGGCCCGGGGCCGGCGCGAGCCCGCCACCAGCACGCGAAAGGCGTACCCGCGCCGggcg > 2:7124663/1‑150 (MQ=255) ccTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATG‑CCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGggcggc < 1:570160/150‑1 (MQ=255) tgtgGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATG‑TCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCt > 1:3041309/1‑150 (MQ=255) tgGGAGCGGGCacgcccgcgaacaccggcaaagccggtggcatccaccgcagtggatgcttcgcgggctcgcccgctcccacaggaaggcattagggccccaaatttattcctcactgcgattggagttataaccaaatcgtagaaatca > 1:2134736‑M1/1‑11 (MQ=255) gggAGCGGGCGAGCCCCCCAAGCAACCACTGCGGTGGATG‑CCACCCGCGTTGCCGGTGTTCGCCGGCGTgcccgctcccacaggaaggcaatagggccccaaatgtattcctcacggcgattggagttataaccaaatcgtagaaatcat < 2:384789‑M2/150‑82 (MQ=255) ggcgcggGCccgcccgcgaaccccggcaacgccggtggcagccaccgcagtggatgctgcgcgggctcgcccgctcccacaggaaggcattagggccccaaatttattcctcactgcgattggagttataaccaaatcgtagaaatcatt < 2:5640963‑M1/147‑142 (MQ=255) ggAGCGGGCacgcccgcgaacaccggcaaagccggtggcatccaccgcagtggatgcttcgcgggctcgcccgctcccacaggaaggcattagggccccaaatttattcctcactgcgattggagttataaccaaatcgtagaaatcatt < 2:5027145‑M1/150‑142 (MQ=255) gAGCGGGCacgcccgcgaacaccggcaaagccggtggcatccaccgcagtggatgcttcgcgggctcgcccgctcccacaggaaggcattagggccccaaatttattcctcactgcgattggagttataaccaaatcgtagaaatcattg > 2:17705‑M1/1‑8 (MQ=255) tgcGGGCacgcccgcgaacaccggcaaagccggtggcatccaccgcagtgtatgcttcgcgggctcgcccgctcccacaggaaggcattagggccccaaatttattcctcactgcgattggagttataaccaaatcgtagaaatcattgt < 2:5072421‑M1/149‑144 (MQ=255) gCacgcccgcgaacaccggcaaagccggtggcatccaccgcagtggatgcttcgcgggctcgcccgctcccacaggaaggcattagggccccaaatttattcctcactgcgattggagttatacccaaatcgtagaactcattgtgccat > 2:3807366‑M1/1‑2 (MQ=255) gCacgcccgcgaacaccggcaaagccggtggcatccaccgcagtggatgcttcgcgggctcgcccgctcccacaggaaggcattagggccccaaatttattcctcactgcgattggagttataaccaaatcgtagaaatcattgtgccat > 2:4287918‑M1/1‑2 (MQ=255) | ACAACCCTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATG‑CCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTG > NC_002947/1316525‑1316823 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |