New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 1316674374 (1.000)29 (0.090) 16/250 NT 7.5% intergenic (‑187/+91) PP_1144/rapA membrane protein/RNA polymerase‑associated protein RapA
?NC_002947 = 1316733 377 (1.110)intergenic (‑246/+32) PP_1144/rapA membrane protein/RNA polymerase‑associated protein RapA

Only 100 of 484 total aligned reads displayed.

TAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTCGCTGTCACGCACACTTGGG  >  NC_002947/1316584‑1316882
                                                                                                                                                      |                                                                                                                                                     
tAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGt                                                                                                                                                       <  2:1029609/150‑1 (MQ=255)
tAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCAACCACAGCGGGGGGTGCCACCGGCG‑TTGCCGGTGTTAGCGGGCGt                                                                                                                                                       >  1:6561972/1‑150 (MQ=255)
  aTGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCCCGAAGCAACCCCAGCGGGGGGAGCCACCCGCGGTTGCCGG‑GTTGGCGGGGGTgc                                                                                                                                                     <  2:453262‑M2/150‑3 (MQ=255)
    ggCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTgccc                                                                                                                                                   >  1:1736334‑M2/1‑146 (MQ=255)
     gCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCCCGAAGCAACCACTGCGGGGGGTGCCACCCGCA‑TTGCCGGTGTTCGCGGGCCTgcccg                                                                                                                                                  <  2:7008519‑M2/150‑6 (MQ=255)
       acaATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACAGCGGTGGTTGCCACCCGCT‑TTGCCGGGGTTAGCGGGCGTgcccgca                                                                                                                                                <  1:8815696‑M2/150‑8 (MQ=255)
       acaATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCCAAGCATCCCCTGCGGTGGGTGGCCCCGGGG‑TTGCCGGGGTTAGCGGGCGTgcccgcg                                                                                                                                                <  2:3222867‑M2/150‑8 (MQ=255)
       acaATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCCCGAAGCAACCACAGCGGTGGATGCCACCCGCG‑TTGCCGGTGTTCGCGGGCGTgcccgca                                                                                                                                                <  2:4208618‑M2/150‑8 (MQ=255)
         aaTGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTgcccgctcc                                                                                                                                              <  2:5027145‑M2/150‑10 (MQ=255)
           tGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTACTGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTgcccgctccca                                                                                                                                            >  2:3825522‑M2/1‑139 (MQ=255)
              tttCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACaa                                                                                                                                         <  2:7660231/150‑1 (MQ=255)
                  tACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGGCCGCCAAGCAAAAACAGCGGTGGATTGCACCCGCA‑GTTCCGGGGGTGGCGGGCGGGCCCCCAACCACAAaggg                                                                                                                                     >  1:4193645/1‑150 (MQ=255)
                  tACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGGGGAGCATCCACTGCGGGGGGTGCCCCCCGCG‑TTTCCGGTGGTCGCGGGGGTGGCCGCACCCACAAaggg                                                                                                                                     >  2:1925573/1‑150 (MQ=255)
                     gATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGgcgc                                                                                                                                  <  2:1566927/150‑1 (MQ=255)
                       tttGGTTATACCTCCAATCGCAGTGTTGAATAATTTTGGGGGCCTACTGCGTTGGTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCgg                                                                                                                                <  1:4803488/150‑1 (MQ=25)
                                aaCTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCCCGAATCAAACACAGCCGTGGGTTGCAACCGCG‑TTTCCCGTGTTGGCGGGCGGGGCCCCACCCACAAAGGGCGCGGGGCCAgcgc                                                                                                                       >  2:1792132/1‑150 (MQ=255)
                                 aCTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATACACAGCGGTGGATGCCACCCGCG‑TTTCCGGTGTTCGCGGGCGTGCCCGCTCCCACAACGGGCCCGGGGCCAgcgcg                                                                                                                      >  2:5724319/1‑149 (MQ=38)
                                  cTCCACTCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTa                                                                                                                     <  2:2529795/150‑1 (MQ=255)
                                  cTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAAGGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTa                                                                                                                     <  1:7056963/150‑1 (MQ=255)
                                    ccAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCCAACACTGCGGTGGAAGCCACCCGCT‑TTGCCCGTGTTGGCGGGCGGGCCCGCTCCCCCCAGGGGCGCGGGGGCGGCGCTagc                                                                                                                   >  2:6631100/1‑150 (MQ=37)
                                     cAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGGCCCCGGAGCCAAAACTGCGGTGGGTGCCACCCGCG‑TTTGCGGTGTTGGCGGGCGGGCCCCCGCCCACCACGGGGGCGGGGGCGGCGCTagcc                                                                                                                  >  2:3019132/1‑150 (MQ=255)
                                      cctCGCTGTGCGGAATAATTTGGGGGCCCTATTGCCTTCGTGTGGGCGCGGGCGCGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTagcca                                                                                                                 <  1:1785343/148‑1 (MQ=25)
                                      aaTCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTagcca                                                                                                                 <  2:4708939/150‑1 (MQ=255)
                                       aTCGCTTTGTGGAATAATTGGGGGGCCCTAAGGCCTGCGGGTGGGCGGGGGCGCCCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTagccag                                                                                                                <  1:4452290/150‑1 (MQ=25)
                                       aTCGCTGTTAGTAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGGGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGAGCGCAGGCCCCgcgccccttgt                                                                                                                <  1:2494341/150‑8 (MQ=25)
                                           ccgTGAGTAATAAATTTGGGGCCCTAAGGCCTGCCTTTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGccac                                                                                                            <  1:577472/148‑1 (MQ=255)
                                            aGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGccacc                                                                                                           <  1:686459/150‑1 (MQ=255)
                                             gTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCAAACACAGCGGTGGGTGCCACCCGCT‑TTGCCGGTGTTGGCGGGCCTGCCCGCTCCCACAATGGGCGCGGGGCCTGCGCGAGCCCGccccca                                                                                                          >  2:6744721/1‑150 (MQ=37)
                                                   aataatTTTGGGGCCCTATGGCCTTCGTGGGGGCGGGGGCGAGCCCGCGAAGCATCCACGGCGGGGGATGCCACCGGCT‑TGGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCAcgc                                                                                                    <  1:2199093/150‑1 (MQ=37)
                                                   aaTAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCAcgc                                                                                                    <  2:7836365/150‑1 (MQ=255)
                                                   aaTAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCAcgc                                                                                                    <  2:8261310/150‑1 (MQ=255)
                                                       attttGGGGCCCTATGGCGTTCGTGGGGGCGCGGGCGACCCCGCGAAGCATCCACGGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAAt                                                                                                <  1:5914358/148‑1 (MQ=37)
                                                       aaTTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAAt                                                                                                <  2:4886015/150‑1 (MQ=255)
                                                        aTTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATg                                                                                               <  1:2020179/150‑1 (MQ=255)
                                                                     aTGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCAACCACTGCGGTGGTTTCCACCCGCT‑GTTGCGGGGTTAGCGGGCGTGCCCGCGCCCACAAGGGGCGCGGGGGCGGCCCTAGCCCCCCACCAGCCCGCCAATGGGGTCCACgcgcc                                                                                  >  1:8064896/1‑149 (MQ=19)
                                                                     aTGCCTTCCGGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCa                                                                                  <  2:2066416/150‑1 (MQ=255)
                                                                       gCCTTCCTGGGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAgg                                                                                <  1:2697592/150‑1 (MQ=255)
                                                                          ttCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGggcg                                                                             <  2:5621893/150‑1 (MQ=255)
                                                                          ttCCTGTGGGAGCGGGCGAGCCCCCCTAGCAACCACAGCCGTGGCTTCCCCCCGCG‑TTGCCGGGGTTCGCGGGCCTGCCCCCTCCCCCAACGGGCCCGGGGCCGGCGCGAGCCCGCCACCAGCACGCGAAAGGCGTACCCGCGCCGggcg                                                                             >  2:7124663/1‑150 (MQ=255)
                                                                             cTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGcc                                                                          <  2:8638713/150‑1 (MQ=255)
                                                                                  ggAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTgcccgctcccacaggaaggcattagggccccaaatttattcctcactgcgattggagttataaccaaatcgtagaaatcatt                                                                     <  2:3556522‑M2/150‑83 (MQ=255)
                                                                                   gAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTcc                                                                    <  2:1684257/150‑1 (MQ=255)
                                                                                     gCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACCAGGGGCGCGGGGCCTGCGCGAGCCAGCCCCCAGCACCCGACTGGCTTCCGGGCGCAGGGCGGCCTTCTcccc                                                                  >  2:643998/1‑148 (MQ=37)
                                                                                     gCGGGCGAGCCCGCGAAGCATACACTGCGGTGGATTCCACCGGCT‑TTTCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAg                                                                  >  2:7960936/1‑150 (MQ=255)
                                                                                      cGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGc                                                                 <  1:1281976/150‑1 (MQ=255)
                                                                                       gggCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCa                                                                <  2:7795051/150‑1 (MQ=255)
                                                                                         gCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTgcccgctcccacaggaaggcattagggccccaaatttattcctcactgcgattggagttataaccaaatcgtagaaatcattgtgccat                                                              <  1:3619589‑M2/150‑90 (MQ=255)
                                                                                         gCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCAtt                                                              <  1:4876324/150‑1 (MQ=255)
                                                                                           gAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTgcccgctcccacaggaaggcattagggccccaaatttattcctcactgcgattggagttataaccaaatcgtagaaatcattgtgccatta                                                            <  2:2865927‑M2/150‑92 (MQ=255)
                                                                                              cccGCGAAGCATCCACTGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGCgcccgctcccacaggaaggcattagggccccaaatttattcctcactgcgattggagttataaccaaatcgtagaaatcattgtgccattagtc                                                         <  1:3735095‑M2/150‑95 (MQ=255)
                                                                                               ccGCGAAGCATCCACTGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTgcccgctcccacaggaaggcattagggccccaaatttattcctcactgcgattggagttataaccaaatcgtagaaatcattgtgccattagtca                                                        <  1:5048791‑M2/150‑96 (MQ=255)
                                                                                                cgcgAAGCATCCACTGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTGCCAGGc                                                       >  2:1144043/1‑150 (MQ=255)
                                                                                                ccggtaGCATCCACTGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTGCCAGGc                                                       >  2:2568303/6‑150 (MQ=255)
                                                                                                 gcgAAGCATCCACTGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTGCCAGGcc                                                      >  2:6188230/1‑150 (MQ=255)
                                                                                                 gcgAAGCATCCACTGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTGCCAGGcc                                                      >  2:5531587/1‑150 (MQ=255)
                                                                                                  ggtggCATCCACTGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTGCCAGGCCa                                                     >  2:3748791/5‑150 (MQ=255)
                                                                                                  ggtggCATCCACCGCAGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTGCCAGGCCa                                                     >  2:391895/5‑150 (MQ=255)
                                                                                                   gAAGCATCCACTGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTGCCAGGCCAt                                                    >  1:2596955/1‑150 (MQ=255)
                                                                                                   gAAGCATCCACTGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTGCCAGGCCAt                                                    >  1:7497944/1‑150 (MQ=255)
                                                                                                    tggCATCCACCGCAGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTGCCAGGCCATc                                                   >  2:2436406/3‑150 (MQ=255)
                                                                                                       cATCCACTGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTGCCAGGCCATCTTc                                                >  2:2726254/1‑150 (MQ=255)
                                                                                                        aTCCACTGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAgg                                                                                      <  2:2803377/111‑1 (MQ=255)
                                                                                                        aTCCACTGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTGCCAGGCCATCTTcg                                               >  2:2241886/1‑150 (MQ=255)
                                                                                                        aTCCACTGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTGCCAGGCCATCTTcg                                               >  1:3523579/1‑150 (MQ=255)
                                                                                                        aTCCACTGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTGCCAGGCCATCTTcg                                               >  1:2068691/1‑150 (MQ=255)
                                                                                                                 ggTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTg                                      <  1:8719520/150‑1 (MQ=255)
                                                                                                                   ccgcgaacACCGGCA‑AAGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTgcg                                    >  1:1394966/8‑150 (MQ=255)
                                                                                                                     gATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCa                                  <  1:3024830/150‑1 (MQ=255)
                                                                                                                        gCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAggg                               >  2:1504674/1‑150 (MQ=255)
                                                                                                                        gCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAggg                               >  1:4988593/1‑150 (MQ=255)
                                                                                                                        gCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAggg                               <  2:5162537/150‑1 (MQ=255)
                                                                                                                         ccACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGc                              <  2:8765104/150‑1 (MQ=255)
                                                                                                                         ccACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGc                              <  2:2170719/150‑1 (MQ=255)
                                                                                                                         acACCGGCA‑AAGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGc                              >  1:2529117/2‑150 (MQ=255)
                                                                                                                         acACCGGCA‑AAGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCACCACGCGAATGGCTTCCAGGCGCAGGGCGGCCGTCTCCAGCATTGCCAGGCCCTCTTCGCGCCGCTTGCGCAGGGc                              >  1:1045254/2‑150 (MQ=255)
                                                                                                                          cACCGGCT‑TTGCCGGTGTTCGCGGGCGTgcccgctcccacaggaaggcattagggccccaaatttattcctcactgcgattggagttataaccaaatcgtagaaatcattgtgccattagtcaggaaggcttaagtactccttcctatac                             <  1:4245096‑M2/150‑123 (MQ=255)
                                                                                                                          cACCGGCA‑AAGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCg                             >  2:4315441/1‑150 (MQ=255)
                                                                                                                           aCCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACCAGGGGCGCGGGGCCTGCGCGAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTGCCAGGCCATCTTCGCGCCGCGTGCGCAGGGCgg                            >  1:1525561/1‑149 (MQ=255)
                                                                                                                            ccGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTc                           <  2:3611415/150‑1 (MQ=255)
                                                                                                                            ccGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTc                           >  2:6020554/1‑150 (MQ=255)
                                                                                                                            ccGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTc                           <  1:7679659/150‑1 (MQ=255)
                                                                                                                            ccGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTc                           <  1:8507165/150‑1 (MQ=255)
                                                                                                                               gCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTCGCCAGCCACCAGCCCGCGAATGGCGTCCAGGCGCAGGGCGGCCTTCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGAt                        <  2:7239244/150‑1 (MQ=255)
                                                                                                                               gCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTGCCAGGCCATCTTCGCTCCGCTTGCGCAGGGCGTCGAt                        >  2:5334347/1‑150 (MQ=255)
                                                                                                                                 t‑ttGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGAttt                      >  1:525499/1‑150 (MQ=255)
                                                                                                                                 t‑ttGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGAttt                      >  1:7241233/1‑150 (MQ=255)
                                                                                                                                   ttGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTc                     <  1:3222867/150‑1 (MQ=255)
                                                                                                                                   ttGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTc                     <  2:4134/150‑1 (MQ=255)
                                                                                                                                    tGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTCg                    <  1:3884346/150‑1 (MQ=255)
                                                                                                                                      ccGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTCGCt                  <  1:6629020/150‑1 (MQ=255)
                                                                                                                                      ccGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTCGCt                  <  1:6407947/150‑1 (MQ=255)
                                                                                                                                      ccGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTCGCt                  <  1:8235420/150‑1 (MQ=255)
                                                                                                                                      ccGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTCGCt                  <  2:8105653/150‑1 (MQ=255)
                                                                                                                                        ggTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTCGCTGt                <  1:7943119/150‑1 (MQ=255)
                                                                                                                                           gggagcgggcgAgcccgctcccacaggaaggcattagggccccaaatttattcctcactgcgattggagttataaccaaatcgtagaaatcattgtgccattagtcaggaaggcttaagtactccttcctatactgcctctggacagtct             <  1:734835‑M2/146‑139 (MQ=255)
                                                                                                                                           gggagcgGGCACGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTCGCTGTCAc             >  1:5559394/5‑150 (MQ=255)
                                                                                                                                            ttCGCGGGCTCGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTCGCTGTCACg            >  2:3393865/1‑150 (MQ=255)
                                                                                                                                               gcgGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTCGCTGTCACGcac         >  2:1268813/1‑150 (MQ=255)
                                                                                                                                                    cGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTCGCTGTCACGCACACTTg    <  1:1189658/150‑1 (MQ=255)
                                                                                                                                                     gTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTCGCTGTCACGCACACTTgg   <  1:6063805/150‑1 (MQ=255)
                                                                                                                                                      |                                                                                                                                                     
TAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCT‑TTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTCGCTGTCACGCACACTTGGG  >  NC_002947/1316584‑1316882

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.