New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 18259760 (0.000)61 (0.170) 9/266 NT 100% coding (748/1422 nt) PP_1624 group II intron‑encoding maturase
?NC_002947 = 2075325 NA (NA)coding (707/1422 nt) PP_1846 group II intron‑encoding maturase

ACGACATCCTCATGGCCTGCATCGAACGTCGGATCAGAGACAAGTGCGTACTCAGGCTTATCCGCCGCTACCTTGAAGCCGGGATCATGTCGGGCGGTGTCGTCAGCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTCTCGCCGTTGCTGTCGAATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCAGTCCCCGGGCCGGCGAACGGGTGTTGGTCAGCGTCGAGCGCTTCCTGAGA  >  NC_002947/1825827‑1826125
                                                                                                                                                     |                                                                                                                                                     
ccgACATCCTCCTGGCCTGCATCGAACGTCGGATCAGAGACAAGTGCGTACTCAGGCTTATCCGCCGCTACCTTGAAGCCGGGATCATGTCGGGCGGTGTCGTCAGCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTCTCGCCGT                                                                                                                                                       <  2:715539‑M1/149‑1 (MQ=255)
aCGACATCCTCATGGCCTGCATCGAACGTCGGATCAGAGACAAGTGCGTACTCAGGCTTATCCGCCGCTACCTTGAAGCCGGGATCATGTCGGGCGGTGTCGTCAGCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTCTCGCCGT                                                                                                                                                       >  1:6162703‑M1/1‑150 (MQ=255)
aCGACATCCTCATGGCCTGCATCGAACGTCGGATCAGAGACAAGTGCGTACTCAGGCTTATCCGCCGCTACCTTGAAGCCGGGATCATGTCGGGCGGTGTCGTCAGCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTCTCGCCGT                                                                                                                                                       <  2:6292710‑M1/150‑1 (MQ=255)
aCGACATCCTCATGGCCTGCATCGAACGTCGGATCAGAGACAAGTGCGTACTCAGGCTTATCCGCCGCTACCTTGAAGCCGGGATCATGTCGGGCGGTGTCGTCAGCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTCTCGCCGT                                                                                                                                                       >  2:2382306‑M1/1‑150 (MQ=255)
aCGACATCCTCATGGCCTGCATCGAACGTCGGATCAGAGACAAGTGCGTACTCAGGCTTATCCGCCGCTACCTTGAAGCCGGGATCATGTCGGGCGGTGTCGTCAGCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTCTCGCCGT                                                                                                                                                       >  1:2355814‑M1/1‑150 (MQ=255)
aCGACATCCTCATGGCCTGCATCGAACGTCGGATCAGAGACAAGTGCGTACTCAGGCTTATCCGCCGCTACCTTGAAGCCGGGATCATGTCGGGCGGTGTCGTCAGCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTCTCGCCGT                                                                                                                                                       >  1:5568697‑M1/1‑150 (MQ=255)
aCGACATCCTCATGGCCTGCATCGAACGTCGGATCAGAGACAAGTGCGTACTCAGGCTTATCCGCCGCTACCTTGAAGCCGGGATCATGTCGGGCGGTGTCGTCAGCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTCTCGCCGT                                                                                                                                                       >  1:6766754‑M1/1‑150 (MQ=255)
aCGACATCCTCATGGCCTGCATCGAACGTCGGATCAGAGACAAGTGCGTACTCAGGCTTATCCGCCGCTACCTTGAAGCCGGGATCATGTCGGGCGGTGTCGTCAGCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTCTCGCCGT                                                                                                                                                       <  2:7086603‑M1/150‑1 (MQ=255)
aCGACATCCTCATGGCCTGCATCGAACGTCGGATCAGAGACAAGTGCGTACTCAGGCTTATCCGCCGCTACCTTGAAGCCGGGATCATGTCGGGCGGTGTCGTCAGCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTCTCGCCGT                                                                                                                                                       <  1:7719451‑M1/150‑1 (MQ=255)
                                                                                gggATCATGTCGGGCGGTGTCGTCAGCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTTTCGCCGTtgctgtcgaatatcctgctcgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttatctttgacc                                                                       >  1:3258876‑M1/1‑70 (MQ=255)
                                                                                gggATCATGTCGGGCGGTGTCGTCAGCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTCTCGCCGTtgctgtcgaatatcctgctcgacatgatcccggcttcaaggtagcggcggataagcctgagtacgcacttgtctctgatc                                                                       >  1:6646623‑M1/1‑70 (MQ=255)
                                                                                gggATCATGTCGGGCGGTGTCGTCAGCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTCTCGCCGTtgctgtcgaatatcctgctcgacatgatcccggcttcaaggtagcggcggataagcctgagtacgcacttgtctctgatc                                                                       >  2:8243923‑M1/1‑70 (MQ=255)
                                                                                               ggTGTCGTCAGCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTCTCGCCGTtgctgtcgacaccgcccgacatgatcccggcttcaaggtagcggcggataagcctgagtacgcacttgtctctgatccgacgttcgatgcaggcc                                                        >  1:3453910‑M1/1‑55 (MQ=255)
                                                                                                gtgtCGTCAGCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTTTCGCCGTtgctgtcgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttgtctttgatccgacgttcgatgcaggcca                                                       >  1:4233652‑M1/1‑54 (MQ=255)
                                                                                                gtgtCGTCAGCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTTTCGCCGTtgctgtcgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttgtctttgatccgacgttcgatgcaggcca                                                       >  1:3534934‑M1/1‑54 (MQ=255)
                                                                                                gtgtCGTCAGCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTTTCGCCGTtgctgtcgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttgtctttgatccgacgttcgatgcaggcca                                                       >  1:2086306‑M1/1‑54 (MQ=255)
                                                                                                gtgtCGTCAGCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTTTCGCCGTtgctgtcgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttatctttgacccggcgctcgatacaggcca                                                       >  1:3043642‑M1/1‑54 (MQ=255)
                                                                                                 tgtCGTCAGCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTTTCGCCGTtggctgacaacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttatctttgacccggcgctcgatacaggcca                                                      >  1:6377264‑M1/1‑53 (MQ=255)
                                                                                                 tgtCGTCAGCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTTTCGCCGTtgctgtcgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttgtctttgatccgacgttcgatgcaggccat                                                      >  1:3591393‑M1/1‑53 (MQ=255)
                                                                                                   tcgtcAGCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTTTCGCCGTtgctgacgacaccgcccgacatgatcccggcttcaaggtcgcggcgaataagcctgaggacgcacttgtctttgatccgacgttcgatgcaggccatga                                                    >  2:8091580‑M1/1‑51 (MQ=255)
                                                                                                     gtcAGCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTCTCGCCGTtgctgtcgacaccgcccgacatgatcccggcttcaaggtagcggcggataagcctgagtacgcacttgtctctgatccgacgttcgatgcaggccatgagg                                                  >  2:6314541‑M1/1‑49 (MQ=255)
                                                                                                      tcAGCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTTTCGCCGTtggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttatctttgacccggcgctcgatacaggccatcagg                                                 >  2:3011135‑M1/1‑48 (MQ=255)
                                                                                                      tcAGCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTCTCGCCGTtggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcggataagcctgagtacgcacttgtctctgatccgacgttcgatgcaggccatgagg                                                 >  1:6828329‑M1/1‑48 (MQ=255)
                                                                                                      tcAGCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTCTCGCCGTtgctgacgacaccgcccgacatgatcccggcttcaaggtagcggcggataagcctgagtacgcacttgtctctgatccgacgttcgatgcaggccatgagga                                                 >  2:4009920‑M1/1‑48 (MQ=255)
                                                                                                      tcAGCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCCCTCTCGCCGTgggctgacgaccccgcccgacatgatcccggcttcaaggtagcggcggataagcctgagtacgcacttgtctctgatccgacgttcgatgcaggccaagagg                                                 >  1:4489953‑M1/1‑48 (MQ=255)
                                                                                                       cAGCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTCTCGCCGTtgctgacgacaccgcccgacatgatcccggcttcaaggtagcggcggataagcctgagtacgcact                                                                                     >  1:8169407‑M1/1‑47 (MQ=255)
                                                                                                       cAGCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTCTCGCCGTtgctgacgacaccgcccgacatgatcccggcttcaaggtagcggcggataagcctgagtacgcact                                                                                     <  2:8169407‑M1/113‑67 (MQ=255)
                                                                                                        aGCCCACGGCTGGCGGGGACGCCGCAAGGGGGCCCGCTTTCGCCGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttatctttgacccggcgctcgatacaggccatcaggat                                               <  2:838549‑M1/150‑105 (MQ=255)
                                                                                                        aGCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTTTCGCCGTtgctgacgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttgtctttgatccgacgttcgatgcaggccatgaggatg                                               >  2:4065155‑M1/1‑46 (MQ=255)
                                                                                                        aGCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTCTCGCCGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcggataagcctgagtacgcacttgtctctgatccgacgttcgatgcaggccatgaggat                                               >  1:5374324‑M1/1‑46 (MQ=255)
                                                                                                         gCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTTTCGCCGTtggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttgtctttgatccgacgttcgatgcaggccatgaggatg                                              >  2:3164578‑M1/1‑45 (MQ=255)
                                                                                                         gCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTCTCGCCGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcggataagcctgagtacgcacttgtctctgatccgacgttcgatgcaggccatgaggatg                                              >  2:312246‑M1/1‑45 (MQ=255)
                                                                                                         gCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTCTCGCCGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcggataagcctgagtacgcacttgtctctgatccgacgttcgatgcaggccatgaggatg                                              >  2:6558128‑M1/1‑45 (MQ=255)
                                                                                                         gCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTCTCGCCGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcggataagcctgagtacgcacttgtctctgatccgacgttcgatgcaggccatgaggatg                                              >  1:4596139‑M1/1‑45 (MQ=255)
                                                                                                         gCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTCTCGCCGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcggataagcctgagtacgcacttgtctctgatccgacgttcgatgcaggccatgaggatg                                              >  1:7128570‑M1/1‑45 (MQ=255)
                                                                                                         gCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTCTCGCCGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcggataagcctgagtacgcacttgtctctgatccgacgggcgatgcgggccaggaggatg                                              >  1:7394718‑M1/1‑45 (MQ=255)
                                                                                                          cccACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTTTCGCCGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttatctttgacccggcgctcgatacaggccatcaggatgt                                             >  1:1975402‑M1/1‑44 (MQ=255)
                                                                                                          cccACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTTTCGCCGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttatctttgacccggcgctcgatacaggccatcaggatgt                                             >  1:1975689‑M1/1‑44 (MQ=255)
                                                                                                          cccACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTTTCGCCGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttatctttgacccggcgctcgatacaggccatcaggatgt                                             >  2:4908433‑M1/1‑44 (MQ=255)
                                                                                                          cccACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTCTCGCCGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcggataagcctgagtacgcacttgtctctgatccgacgttcgatgcaggccatgaggatgt                                             >  1:5496511‑M1/1‑44 (MQ=255)
                                                                                                          cccACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTCTCGCCGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcggataagcctgagtacgcacttgtctctgatccgacgttcgatgcaggccatgaggatgt                                             >  1:4454411‑M1/1‑44 (MQ=255)
                                                                                                          cccACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTCTCGCCGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcggataagcctgagtacgcacttgtctctgatccgacgttcgatgcaggccatgaggatgt                                             >  1:4454697‑M1/1‑44 (MQ=255)
                                                                                                           ccACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTTTCGCCGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttgtctttgatccgacgttcgatgcaggccatgaggatgtc                                            >  2:3116473‑M1/1‑43 (MQ=255)
                                                                                                           ccACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTTTCGCCGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttgtctttgatccgacgttcgatgcaggccatgaggatgtc                                            >  1:5018626‑M1/1‑43 (MQ=255)
                                                                                                           ccACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTTTCGCCGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttatctttgacccggcgctcgatacaggccatcaggatgtc                                            >  1:8438639‑M1/1‑43 (MQ=255)
                                                                                                           ccACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTCTCGCCGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcggataagcctgagtacgcacttgtctctgatccgacgttcgatgcaggccatgaggatgtc                                            >  1:8679172‑M1/1‑43 (MQ=255)
                                                                                                           ccACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTCTCGCCGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcggataagcctgagtacgcacttgtctctgatccgacgttcgatgcaggccatgaggatgtc                                            >  2:8716752‑M1/1‑43 (MQ=255)
                                                                                                           ccACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTCTCGCCGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcggataagactgagtacgcacttgtctctgatccgacgttcgatgcaggccatgaggatgtc                                            >  2:5633698‑M1/1‑43 (MQ=255)
                                                                                                           ccACGGCAGGAGGGGACGCCGCAAGGCGGCCCCTCCTGCCGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcggataagcctgagtacgcacttgtctctgatccgacgttcgatgcaggccatgaggatgtcg                                           >  1:5527334‑M1/1‑42 (MQ=255)
                                                                                                           ccACGGCAGGAGGGGACGCCGCAAGGCGGCCCCTCCTGCCGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttgtctttgatccgacgttcgatgcaggccatgaggatgtcg                                           >  1:3837513‑M1/1‑42 (MQ=255)
                                                                                                            cACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTTTCGCCGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttgtctttgatccgacgttcgatgcaggccatgaggatgtcg                                           >  2:3881109‑M1/1‑42 (MQ=255)
                                                                                                            cACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTTTCGCCGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttgtctttgatccgacgttcgatgcaggccatgaggatgtcg                                           >  2:3880821‑M1/1‑42 (MQ=255)
                                                                                                            cACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTCTCGCCGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcggataagcctgagtacgcacttgtctctgatccgacgttcgatgcaggccatgaggatgtcg                                           >  2:3371009‑M1/1‑42 (MQ=255)
                                                                                                            cACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTCTCGCCGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcggataagcctgagtacgcacttgtctctgatccgacgttcgatgcaggccatgaggatgtcg                                           >  1:7559988‑M1/1‑42 (MQ=255)
                                                                                                            cACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTCTCGCCGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcggataagcctgagtacgcacttgtctctgatccgacgttcgatgcaggccatgaggatgtcg                                           >  1:5653059‑M1/1‑42 (MQ=255)
                                                                                                             aCGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTTTCGCCGTgggctgacgacaccgcccgacatgatcccggcttcaaggtcgcggcgaataagcctgagtacgcacttgtctttgatccgacgttcgatgcaggccaggaggatgtcgt                                          >  2:843964‑M1/1‑41 (MQ=255)
                                                                                                             aCGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTTTCGCCGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttatctttgacccggcgctcgatacaggccatcaggatgtcgt                                          >  2:7712170‑M1/1‑41 (MQ=255)
                                                                                                             aCGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTTTCGCCGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttatctttgacccggcgctcgatacaggccatcaggatgtcgt                                          >  2:8632081‑M1/1‑41 (MQ=255)
                                                                                                             aCGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTCTCGCCGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcggataagcctgagtacgcacttgtctctgatccgacgttcgatgcaggccatgaggatgtcgt                                          >  1:6773552‑M1/1‑41 (MQ=255)
                                                                                                               ggCAGGAGGGGACGCCGCAAGGCGGCCCCTCCTGCCGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttgtctttgatccgacgttcgatgcaggccatgaggatgtcgtgat                                       >  2:6650068‑M1/1‑38 (MQ=255)
                                                                                                                 cAGGAGGGGACGCCGCAAGGCGGCCCGCTTTCGCCGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttgtctttgatccgacgttcgatgcaggccatgaggatgtcgtgatt                                      >  2:90576‑M1/1‑37 (MQ=255)
                                                                                                                 cAGGAGGGGACGCCGCAAGGCGGCCCGCTCTCGCCGTtgctgtcgaatatcctgctcgacatgatcccggcttcaaggtagcggcggataagcctgagtacgcacttgtctctgatccgacgttcgatgcaggccatgaggatgtcgtga                                      >  1:7815572‑M1/1‑37 (MQ=255)
                                                                                                                  aggaggGGACGCCGCAAGGCGGCCCCTCCTGCCGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttgtctttgatccgacgttcgatgcaggccatgaggatgtcgtgattga                                    >  1:8143282‑M1/1‑35 (MQ=255)
                                                                                                                    gaggGGACGCCGCAAGGCGGCCCCTCCTGCCGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttgtctttgatccgacgttcgatgcaggccatgaggatgtcgtgattgacc                                  >  2:1103949‑M1/1‑33 (MQ=255)
                                                                                                                     aggGGACGCCGCAAGGCGGCCCCTCCTGCCGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttgtctttgatccgacgttcgatgcaggccatgaggatgtcgtgattgaccc                                 >  2:1172181‑M1/1‑32 (MQ=255)
                                                                                                                     aggGGACGCCGCAAGGCGGCCCCTCCTGCCGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcgaa                                                                                                      >  2:6770026‑M1/1‑32 (MQ=255)
                                                                                                                     aggGGACGCCGCAAGGCGGCCCCTCCTGCCGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcgaa                                                                                                      <  1:6770026‑M1/81‑50 (MQ=255)
                                                                                                                       gggACGCCGCAAGGCGGCCCCTCCTGCCGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttgtctttgatccgacgttcgatgcaggccatgaggatgtcgtgattgacccga                               >  1:4343282‑M1/1‑30 (MQ=255)
                                                                                                                        ggACGCCGCAAGGCGGCCCCTCCTGCCGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttgtctttgatccgacgttcgatgcaggccatgaggatgtcgtgattgacccgat                              >  2:212310‑M1/1‑29 (MQ=255)
                                                                                                                         gACGCCGCAAGGCGGCCCCTCCTGCCGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttgtctttgatccgacgttcgatgcaggccatgaggatgtcgtgattgacccgatc                             >  1:3247274‑M1/1‑28 (MQ=255)
                                                                                                                                                 gCCGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttgtctttgatccgacgttcgatgcaggccatgaggatgtcgtgattgacccgatcgaaaaacttctccagatcgagtt      >  2:387291‑M1/1‑5 (MQ=255)
                                                                                                                                                 gCCGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttgtctttgatccgacgttcgatgcaggccatgaggatgtcgtgattgacccgatcgaaaaacttctccagatcgagtt      <  1:4711743‑M1/150‑146 (MQ=255)
                                                                                                                                                 gCCGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttgtctttgatccgacgttcgatgcaggccatgaggatgtcgtgattgacccgatcgaaaaacttctccagatcgagtt      >  2:483169‑M1/1‑5 (MQ=255)
                                                                                                                                                  ccGTgggctgacgacaccgcccgacatgatccctgcttcaaggtagcggcgaataagcctgagtacgcacttgtctttgatccgacgttcgatgcaggccatgaggatgtcgtgattgacccgatcgaaaaacttctccagatcgagttc     <  2:7697633‑M1/150‑147 (MQ=255)
                                                                                                                                                  ccGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttgtctttgatccgacgttcgatgcaggccatgaggatgtcgtgattgacccgatcgaaaaacttctccagatcgagttc     <  2:4160656‑M1/150‑147 (MQ=255)
                                                                                                                                                  ccGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttgtctttgatccgacgttcgatgcaggccatgaggatgtcgtgattgacccgatcgaaaaacttctccagatcgagttc     >  2:4032988‑M1/1‑4 (MQ=255)
                                                                                                                                                  ccGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttgtctttgatccgacgttcgatgcaggccatgaggatgtcgtgattgacccgatcgaaaaacttctccagatcgagttc     >  2:7818368‑M1/1‑4 (MQ=255)
                                                                                                                                                  ccGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttgtctttgatccgacgttcgatgcaggccatgaggatgtcgtgattgacccgatcgaaaaacttctccagatcgagttc     <  1:8398511‑M1/150‑147 (MQ=255)
                                                                                                                                                  ccGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttgtctttgatccgacgttcgatgcaggccatgaggatgtcgtgattgacccgatcgaaaaacttctccagatcgagttc     >  1:7928052‑M1/1‑4 (MQ=255)
                                                                                                                                                  ccGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttgtctttgatccgacgttcgatgcaggccatgaggatgtcgtgattgacccgatcgaaaaacttctccagatcgagttc     >  1:7219594‑M1/1‑4 (MQ=255)
                                                                                                                                                   cGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttgtctttgatccgacgttcgatgcaggccatgaggatgtcgtgattgacccgatcgaaaaacttctccagatcgagttcc    <  2:3314391‑M1/150‑148 (MQ=255)
                                                                                                                                                   cGTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttgtctttgatccgacgttcgatgcaggccatgaggatgtcgtgattgacccgatcgaaaaacttctccagatcgagttcc    <  1:7586628‑M1/150‑148 (MQ=255)
                                                                                                                                                    gTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggctattaagcctgagtacgcacttgtctttgatccgacgttcgttgcaggccatgaggatgtcgtgattgacccgatcgaaaaacttctccagatcgagttcca   <  1:3060794‑M1/150‑149 (MQ=255)
                                                                                                                                                    gTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtactcacttttcttttatccgacgttcgatgcaggccatgaggatgtcgtgattgacccgatcgaaaaacttctccagatcgagttcca   <  1:1333094‑M1/150‑149 (MQ=255)
                                                                                                                                                    gTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttgtctttgatccgacgttcgatgcaggccatgaggatgtcgtgattgacccgatcgaaaaacttctccggatcgagttcca   <  2:2886127‑M1/150‑149 (MQ=255)
                                                                                                                                                    gTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttgtctttgatccgacgttcgatgcaggccatgaggatgtcgtgattgacccgatcgaaaaacttctccagatcgagttcca   <  1:8257257‑M1/150‑149 (MQ=255)
                                                                                                                                                    gTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttgtctttgatccgacgttcgatgcaggccatgaggatgtcgtgattgacccgatcgaaaaacttctccagatcgagttcca   <  1:8076110‑M1/150‑149 (MQ=255)
                                                                                                                                                    gTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttgtctttgatccgacgttcgatgcaggccatgaggatgtcgtgattgacccgatcgaaaaacttctccagatcgagttcca   >  1:184666‑M1/1‑2 (MQ=255)
                                                                                                                                                    gTgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagaacgcacttgtctttgatccgacgttcgatgcaggccatgaggatgtcgtgattgacccgatcgaaaaacttctccagatcgagttcca   >  1:5938829‑M1/1‑2 (MQ=255)
                                                                                                                                                     tgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttgtctttgatccgacgttcgatgcaggccatgaggatgtcgtgattgacccgatcgaaaaacttctccagatcgagttccac  <  2:3182912‑M1/150‑150 (MQ=255)
                                                                                                                                                     tgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttgtctttgatccgacgttcgatgcaggccatgaggatgtcgtgattgacccgatcgaaaaacttctccagatcgagttccac  <  2:3182844‑M1/150‑150 (MQ=255)
                                                                                                                                                     tgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttgtctttgatccgacgttcgatgcaggccatgaggatgtcgtgattgacccgatcgaaaaacttctccagatcgagttccac  <  1:8665225‑M1/150‑150 (MQ=255)
                                                                                                                                                     tgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttgtctttgatccgacgttcgatgcaggccatgaggatgtcgtgattgacccgatcgaaaaacttctccagatcgagttccac  <  1:8063689‑M1/150‑150 (MQ=255)
                                                                                                                                                     tgggctgacgacaccgcccgacatgatcccggcttcaaggtagcggcgaataagcctgagtacgcacttgtctttgatccgacgttcgatgcaggccatgaggatgtcgtgattgacccgatcgaaaaacttctccagatcgagttccac  <  1:7687044‑M1/150‑150 (MQ=255)
                                                                                                                                                     tgggctgacgacaccgcccgacatgatcccggcttcaagggagcggcgaataagcctgagtacgcacttgtctttgatccgacgttcgatgcaggccatgaggatgtcgtgattgacccgatcgaaaaacttctccagatcgagttccac  <  2:6197775‑M1/150‑150 (MQ=255)
                                                                                                                                                     tgggcggaggacaccgcccgacatgatcccggcttcatggtagcggcgaataagcctgagtacgcacgtgtctttgatccgacgttcgatgcagggcatgtggatgtcgtgattgacccgatcgaaaaacttctccagatcgagttccac  <  2:3413201‑M1/150‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
ACGACATCCTCATGGCCTGCATCGAACGTCGGATCAGAGACAAGTGCGTACTCAGGCTTATCCGCCGCTACCTTGAAGCCGGGATCATGTCGGGCGGTGTCGTCAGCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTCTCGCCGTTGCTGTCGAATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCAGTCCCCGGGCCGGCGAACGGGTGTTGGTCAGCGTCGAGCGCTTCCTGAGA  >  NC_002947/1825827‑1826125

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.