New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 18259760 (0.000)61 (0.170) 9/266 NT 100% coding (748/1422 nt) PP_1624 group II intron‑encoding maturase
?NC_002947 = 2075325 NA (NA)coding (707/1422 nt) PP_1846 group II intron‑encoding maturase

CTCATGGCCTGCATCGAACGTCGGATCAAAGACAAGTGCGTACTCAGGCTTATTCGCCGCTACCTTGAAGCCGGGATCATGTCGGGCGGTGTCGTCAGCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTTTCGCCGTTGCTGTCGAATATCCTGCTCGACGAAC  >  NC_002947/2075225‑2075393
                                                                                                    |                                                                    
atcttGGCCTGCATAGAACGTCGTATAAAAGAAAAGTGCGTACTCAGTATTATTCGCCGCTACCTTGAAGCCGGGATCATGTCGGGCGTTTTCGTCAGCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTTTCGCCGTTGCTGTCg                     <  1:8372856/146‑1 (MQ=1)
  cagggCCTGCATCGAACGTCGGATCAAAGACAAGTGCGTACTCAGGCTTATTCGCCGCTACCTTGAAGCCGGGATCATGTCGGGCGGTGTCGTCAGCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTTTCGCCGTTGCTGTCGaa                   <  1:210810/147‑1 (MQ=1)
               gaccGTCGGATCAAAGACAAGTGCGTACTCAGGCTTATTCGCCGCTACCTTGAAGCCGGGATCATGTCGGGCGGTGTCGTCAGCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTTTCGCCGTTGCTGTCGAATATCCTGCTcgac      <  2:6545361/147‑1 (MQ=1)
                   gttggATCAAAGACAAGTGCGTACTCAGGCTTATTCGCCGCTACCTTGAAGCCGGGATCATGTCGGGCGGTGTCGTCAGCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTTTCGCCGTTGCTGTCGAATATCCTGCTCGACGAAc  <  2:3979868/147‑1 (MQ=1)
                                                                                                    |                                                                    
CTCATGGCCTGCATCGAACGTCGGATCAAAGACAAGTGCGTACTCAGGCTTATTCGCCGCTACCTTGAAGCCGGGATCATGTCGGGCGGTGTCGTCAGCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTTTCGCCGTTGCTGTCGAATATCCTGCTCGACGAAC  >  NC_002947/2075225‑2075393

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.