New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5804892 =351 (0.930)9 (0.030) 6/262 NT 2.7% coding (1089/1098 nt) aroB 3‑dehydroquinate synthase
?NC_002947 5804929 = 305 (0.860)coding (1052/1098 nt) aroB 3‑dehydroquinate synthase
Rejected: Frequency below/above cutoff threshold.

Only 100 of 404 total aligned reads displayed.

AGTTGGCCAAGCACGGGCTTGCGCTGGGCCGGGAAGAACTTGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCACCAGACGCAAACGACCGTCGAGCACCTTCTTGTCGACCGCCATGTGCTCCAT  >  NC_002947/5804743‑5805041
                                                                                                                                                     |                                                                                                                                                     
aGTTGGCCAAGCACGGGCTTGCGCTGGGCCGGGAAGAACTTGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTgg                                                                                                                                                       <  2:962262/150‑1 (MQ=255)
aGTTGGCCAAGCACGGGCTTGCGCTGGGCCGGGAAGAACTTGAAGCCAGGTACGCGGGGCGCGAACGGATCATGACTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTgg                                                                                                                                                       >  1:6647765/1‑150 (MQ=255)
 gTTGGCCAAGCACGGGCTTGCGCTGGGCCGGGAAGAACTTGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTggg                                                                                                                                                      >  1:4481265/1‑150 (MQ=255)
   gtgccaccacaggaaatgaccccggcgcatttcatggagcacatggcggtcgacaagaaggtgctcgacggtcgtttgcgtctggtgctgctgcgccagatgggcgaggccgtggtgaccgacgactattcgaaagagattctccaGGcc                                                                                                                                                    <  1:1936225‑M1/4‑1 (MQ=255)
      ccaccacaggaaatgaccccggcgcatttcatggagcacatggcggtcgacaagaaggtgctcgacggtcgtttgcgtctggtgctgctgcgccagatgggcgaggccgtggtgaccgacgactattcgaaagagattctccaGGCCACg                                                                                                                                                 <  1:3241511‑M1/7‑1 (MQ=255)
       cAAGCACGGGCTTGCGCTGGGCCGGGAAGAACTTGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGa                                                                                                                                                >  2:1546599/1‑150 (MQ=255)
       cAAGCACGGGCTTGCGCTGGGCCGGGAAGAACTTGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGa                                                                                                                                                <  1:2845542/150‑1 (MQ=255)
       cAAGCACGGGCTTGCGCTGGGCCGGGAAGAACTTGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGa                                                                                                                                                >  1:4357786/1‑150 (MQ=255)
        aaGCACGGGCTTGCGCTGGGCCGGGAAGAACTTGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGAt                                                                                                                                               >  1:8505719/1‑150 (MQ=255)
            aCGGGCTTGCGCTGGGCCGGGAAGAACTTGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATcgcg                                                                                                                                           >  1:7808276/1‑150 (MQ=255)
                  ttGCGCTGGGCCGGGAAGAACTTGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTaa                                                                                                                                     >  1:4893680/1‑150 (MQ=255)
                      gcTGGGCCGGGAAGAACTTGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATccg                                                                                                                                 <  2:1633983/150‑1 (MQ=255)
                      gcTGGGCCGGGAAGAACTTGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATccg                                                                                                                                 >  2:3826145/1‑150 (MQ=255)
                      gcTGGGCCGGGAAGAACTTGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATccg                                                                                                                                 >  1:2705318/1‑150 (MQ=255)
                      gcTGGGCCGGGAAGAACTTGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGAGCGCGCGGTAATccg                                                                                                                                 >  2:310002/1‑150 (MQ=255)
                       cTGGGCCGGGAAGAACTTGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATccgc                                                                                                                                >  2:1936225/1‑150 (MQ=255)
                        tGGGCCGGGAAGAACTTGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATccgcc                                                                                                                               <  2:1083495/150‑1 (MQ=255)
                        tGGGCCGGGAAGAACTTGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATccgcc                                                                                                                               <  1:2520519/150‑1 (MQ=255)
                               ggAAGAACTTGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCg                                                                                                                        >  2:7906831/1‑150 (MQ=255)
                                gaagaaCTTGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGt                                                                                                                       >  2:3241511/1‑150 (MQ=255)
                                 aagaaCTTGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTg                                                                                                                      <  1:6391289/150‑1 (MQ=255)
                                   gaaCTTGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGc                                                                                                                    <  2:4590666/150‑1 (MQ=255)
                                   catggagcacatggcggtcgacaagaaggtgctcgacggtcgtttgcgtctggtgctgctgcgccagatgggcgaggccgtggtgaccgacgactattcgaaagagattctccaGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGc                                                                                                                    >  1:2959494‑M1/115‑150 (MQ=255)
                                    atggagcacatggcggtcgacaagaaggtgctcgacggtcgtttgcgtctggtgctgctgcgccagatgggcgaggccgtggtgaccgacgactattcgaaagagattctccaGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGcc                                                                                                                   >  1:1414628‑M1/114‑150 (MQ=255)
                                      ctggAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCACCTGGTCATGGTCGAGAAAGGCCTCAGCGGCATGCCAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTg                                                                                                                 <  2:1422550/147‑1 (MQ=255)
                                      cTTGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTg                                                                                                                 <  2:6985597/150‑1 (MQ=255)
                                       ttGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTgg                                                                                                                <  1:5593596/150‑1 (MQ=255)
                                       ttGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTgg                                                                                                                >  2:8478124/1‑150 (MQ=255)
                                        tGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGga                                                                                                               <  2:631279/150‑1 (MQ=255)
                                          aaGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCACAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGgaga                                                                                                             <  2:2073044/150‑1 (MQ=255)
                                           acatggcggtcgacaagaaggtgctcgacggtcgtttgcgtctggtgctgctgcgccagatgggcgaggccgtggtgaccgacgactattcgaaagagattctccaGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGaa                                                                                                            >  1:5214792‑M1/107‑150 (MQ=255)
                                            gCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAAt                                                                                                           >  2:4445772/1‑150 (MQ=255)
                                             ccAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGGCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGCTCGCGCGGTAATCCGCCGACAGCGTGGCCGGGAGACtc                                                                                                          >  2:8574545/1‑150 (MQ=255)
                                               aGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAAtctc                                                                                                        <  1:2135973/150‑1 (MQ=255)
                                                ggTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATctct                                                                                                       <  2:3568396/150‑1 (MQ=255)
                                                  tACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCttt                                                                                                     <  2:8257634/150‑1 (MQ=255)
                                                   aCGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTc                                                                                                    <  1:2595171/150‑1 (MQ=255)
                                                     gcgGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTgg                                                                                                                                                       >  2:5396721/1‑97 (MQ=255)
                                                     gcgGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGa                                                                                                  <  2:400961/150‑1 (MQ=255)
                                                      cgGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGaa                                                                                                 <  2:252006/150‑1 (MQ=255)
                                                      cgGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCACTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGaa                                                                                                 <  2:4153030/150‑1 (MQ=255)
                                                        gggCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATa                                                                                               <  2:7997924/150‑1 (MQ=255)
                                                        gggCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATa                                                                                               <  2:2665037/150‑1 (MQ=255)
                                                            gcgAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAgtcg                                                                                           >  1:2036924/1‑150 (MQ=255)
                                                               aaCGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGtcgtcg                                                                                        <  2:91064/150‑1 (MQ=255)
                                                                aCGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCgg                                                                                       >  1:5465853/1‑150 (MQ=255)
                                                                     tCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTcacc                                                                                  >  2:1843191/1‑150 (MQ=255)
                                                                       aTGGCTCAACTGGTAATGGTCGAGAAGGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTcaccac                                                                                <  2:4272548/150‑1 (MQ=255)
                                                                       aTGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTcaccac                                                                                >  1:6065294/1‑150 (MQ=255)
                                                                        tGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACg                                                                               <  1:3529966/150‑1 (MQ=255)
                                                                             cAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTc                                                                          <  1:5713520/150‑1 (MQ=255)
                                                                              aaCTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCg                                                                         >  2:3388252/1‑150 (MQ=255)
                                                                              aaCTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCg                                                                         >  1:8792419/1‑150 (MQ=255)
                                                                               aCTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGACTCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGc                                                                        >  2:5653500/1‑150 (MQ=255)
                                                                               aCTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGc                                                                        <  1:6518669/150‑1 (MQ=255)
                                                                                 tGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGACTCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCAccc                                                                      >  1:7171382/1‑150 (MQ=255)
                                                                                       tGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTgg                                                                <  2:3962327/150‑1 (MQ=255)
                                                                                            gagaAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCgcag                                                           >  1:4519224/1‑150 (MQ=255)
                                                                                            gagaAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCgcag                                                           <  1:1144/150‑1 (MQ=255)
                                                                                            gagaAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCgcag                                                           <  1:2264452/150‑1 (MQ=255)
                                                                                             agaAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCTCAACCTCAAAGCTGGGCCACGATCGCGCGTTAATCGGCCGTCAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCgcagc                                                          <  2:4646716/150‑1 (MQ=255)
                                                                                              gaAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCgcagca                                                         <  2:7661270/150‑1 (MQ=255)
                                                                                              gaAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCgcagca                                                         <  1:5173267/150‑1 (MQ=255)
                                                                                                aaGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCgcagcagc                                                       <  2:649386/150‑1 (MQ=255)
                                                                                                 aGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCgcagcagca                                                      <  1:4001657/150‑1 (MQ=255)
                                                                                                 aGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCgcagcagca                                                      >  1:622884/1‑150 (MQ=255)
                                                                                                  ggCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCAc                                                     <  1:4089646/150‑1 (MQ=255)
                                                                                                  ggCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCAc                                                     <  2:6153418/150‑1 (MQ=255)
                                                                                                      tCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGTGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCACCAGa                                                 <  1:8620394/150‑1 (MQ=255)
                                                                                                      tCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCACCAGa                                                 <  1:8386273/150‑1 (MQ=255)
                                                                                                       cATCGGCATGCAAACGTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGTGCTGCTGCGCCAGat                                                <  2:5832350/150‑2 (MQ=255)
                                                                                                            gCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCACCAGACGCaaa                                           <  2:2353564/150‑1 (MQ=255)
                                                                                                            gCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCACCAGACGCaaa                                           <  1:1753046/150‑1 (MQ=255)
                                                                                                            gCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCACCAGACGCaaa                                           >  1:6314298/1‑150 (MQ=255)
                                                                                                            gCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCACCAGACGCaaa                                           <  1:7948680/150‑1 (MQ=255)
                                                                                                             cATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCGTCTGGTGCTGCTGCGCCAGatgggcga                                          <  2:6249796/150‑8 (MQ=255)
                                                                                                               tGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCACCAGACGCAAACGa                                        >  2:7139726/1‑150 (MQ=255)
                                                                                                               tGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCACCAGACGCAAACGa                                        <  1:4958299/150‑1 (MQ=255)
                                                                                                                    aCTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCACCAGACGCAAACGACCGTc                                   <  2:7487955/150‑1 (MQ=255)
                                                                                                                    aCTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCACCAGACGCAAACGACCGTc                                   <  2:681218/150‑1 (MQ=255)
                                                                                                                     cTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCACCAGACGCAAACGACCGTCg                                  >  1:2218506/1‑150 (MQ=255)
                                                                                                                      ttGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCACCAGACGCAAACGACCGTCGa                                 <  2:73146/150‑1 (MQ=255)
                                                                                                                        gTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCACCAGACGCAAACGACCGTCGAGc                               >  1:6819056/1‑150 (MQ=255)
                                                                                                                          cATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCACCAGACGCAAACGACCGTCGAGCAc                             <  2:6584375/150‑1 (MQ=255)
                                                                                                                           aTTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCACCAGACGCAAACGACCGTCGAGCAcc                            <  2:7383291/150‑1 (MQ=255)
                                                                                                                            ttGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCACCAGACGCAAACGACCGTCGAGCACct                           >  1:8216781/1‑150 (MQ=255)
                                                                                                                              gcgcTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCACCAGACGCAAACGACCGTCGAGCACcttc                         <  1:7847347/150‑1 (MQ=255)
                                                                                                                               cgcTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCACCAGACGCAAACGACCGTCGAGCACcgtct                        >  2:8083743/1‑150 (MQ=255)
                                                                                                                                gcTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCACCAGACGCAAACGACCGTCGAGCACcttctt                       <  2:4675996/150‑1 (MQ=255)
                                                                                                                                gcTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCACCAGACGCAAACGACCGTCGAGCACcttctt                       <  2:4481265/150‑1 (MQ=255)
                                                                                                                                  tGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCACCAGACGCAAACGACCGTCGAGCACCTTCTTGt                     >  1:1496114/1‑150 (MQ=255)
                                                                                                                                   gTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCACCAGACGCAAACGACCGTCGAGCACCTTCTTGTc                    <  1:2429655/150‑1 (MQ=255)
                                                                                                                                    tCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCACCAGACGCAAACGACCGTCGAGCACCTTCTTGTCg                   >  2:5274984/1‑150 (MQ=255)
                                                                                                                                      acaACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCACCAGACGCAAACGACCGTCGAGCACCTTCTTGTCGAc                 >  1:4655876/1‑150 (MQ=255)
                                                                                                                                           cTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCACCAGACGCAAACGACCGTCGAGCACCTTCTTGTCGACCGCCa            >  1:7323084/1‑150 (MQ=255)
                                                                                                                                            tCAATGCTGGGCCTGGATCGCGCGGTATTCCTCCGAGTGGGTGGCCTGTTGAATCTGGTTCGAATAGTCGTCGTTCACCACGGCCTCGCCCTTCTGGCGCAGCAGCACCAGTCTCAAACGACCGTCGAGCACCTTCTTGTCGACCGCCAt           <  1:3907493/150‑1 (MQ=255)
                                                                                                                                            tCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCACCAGACGCAAACGACCGTCGAGCACCTTCTTGTCGACCGCCAt           >  2:5160746/1‑150 (MQ=255)
                                                                                                                                            tCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCACCAGACGCAAACGACCGTCGAGCACCTTCTTGTCGACCGCCAt           >  1:7537181/1‑150 (MQ=255)
                                                                                                                                             cAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCACCAGACGCAAACGACCGTCGAGCACCTTCTTGTCGACCGCCAtg          <  2:3425997/150‑1 (MQ=255)
                                                                                                                                                    gggCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTTGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCACCAGACGCAAACGACCGTCGAGCACCTTCTTGTCGACCGCCATGTGCTCCa   >  1:1785815/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
AGTTGGCCAAGCACGGGCTTGCGCTGGGCCGGGAAGAACTTGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCACCAGACGCAAACGACCGTCGAGCACCTTCTTGTCGACCGCCATGTGCTCCAT  >  NC_002947/5804743‑5805041

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.