New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5518239 =153 (0.410)15 (0.050) 8/224 NT 10.2% intergenic (+20/‑134) urtD/urtE ABC transporter ATP‑binding protein/ABC transporter ATP‑binding protein
?NC_002947 5518347 = 139 (0.460)intergenic (+128/‑26) urtD/urtE ABC transporter ATP‑binding protein/ABC transporter ATP‑binding protein

Only 100 of 258 total aligned reads displayed.

GAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTCCTTCGAAGCCAAGATCGGCGAAGTGACCTGCCTGCTGGGCCGCAACGGCGTGGGCAAGACCA  >  NC_002947/5518199‑5518496
                                                                                                                                                    |                                                                                                                                                     
gAGGTGTTTCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTATTGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCggcacaggcac                                                                                                                                                      <  2:3522311/150‑1 (MQ=255)
   gtgtCTCTGGGCCGCTGACCGGTTTTTAATTTTTGGCGCCTGTGCCGGCCTCTGCGCGGGTAACCCCGTTCCTACTGTGGGCGTACTGCCTTGGGGCGGTGCCGGTGGTTGGCGGGGTTTTACCCGCGAAGAGGCCGGCACAGGCACAGc                                                                                                                                                   <  2:2376559/150‑1 (MQ=255)
   gtgtATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACACTGGGCGTAATGCCAAGGGGCGGTTCCCCTCGGAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGc                                                                                                                                                   >  2:7500259/1‑150 (MQ=255)
      tATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTAACCGCGAAGAGGCCGGCACAGGCACAGCATc                                                                                                                                                >  2:8016268/1‑150 (MQ=255)
       aTCTGGGCCGCTGACCGGTTTTGATTTTTTGGCGCCTGTGCGGGCCTCTTCGCGGGTAACCCCTTTCCTACCGTGGGCGTACTGCATTGGGGCGGGTCCCGGCGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATcc                                                                                                                                               <  2:3695816/150‑1 (MQ=37)
       aTCTGGGCCGCTGACCGGATTTGAATTTTGGGCGCCTGGGCCGGCCCCTTCGCGGGTAACCCCGTTCCTACCGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATcc                                                                                                                                               <  2:6146715/150‑1 (MQ=255)
            ggCCGTTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTAAAGTGGGCGTAATTCCATGGGGCGGTTCGCGTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTc                                                                                                                                          >  2:8652695/1‑150 (MQ=39)
            ggCCGCTGACCGTTTTTTAATTTTTGGCGCCTGTGCGGGCCTCTTCGGGGGTAACCCCGTTCCTACAGTGGGCTTAATGCCATGGGGCGGTTCCGGTCGTAGGTGCGGTTTTACCCGCGAAGTGGCCGGCACAGGCACAGCATCCCTTTc                                                                                                                                          <  2:7587180/150‑1 (MQ=255)
             gCCGCTGCCCGGATTTGAATTTTGGGCGCCGGGGCCGGCCTCTTCGGGGTTAACCCCGTTCCTACAGTGGGCGTAATGCCTTGGGGCGGTGCCCGTCGTAGGAGCGGGTTTACCCGCGACGAGGCCGGCACAGGCACAGCATCCCTTTCa                                                                                                                                         <  2:442998/150‑1 (MQ=38)
             gCCGCTGACCGTTTTTTATTTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTGCCTCCAGTGGGCGTAATGCCTTGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCa                                                                                                                                         <  2:5163830/150‑1 (MQ=38)
              ccGCTTACCTTATTTTAATTTTTGGCGCCTGTGCCGCCCACTTCGCGTTTAACCCCTTACATACATTGGGCGTAATCCAATGGGGCGGTTCCCTTCTTAGCAGCGGTTTTACCCGCCAAGAGGCCGGCACAGGCACAGCATCCCTTTCAg                                                                                                                                        <  2:1716353/150‑1 (MQ=255)
               cGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCCTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCATTCAgg                                                                                                                                       >  2:6931204/1‑150 (MQ=255)
                     ccGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTAACCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAActct                                                                                                                                 >  2:2114474/1‑150 (MQ=255)
                     ccGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCCGGTAACCCCCGTACTAAAGTGGGCGGAATTCCAAGGGGCGGTTACCGGCGTAGGAGCGGGTTTAACCGCGAAGAGGCCGGCACAGGCACCGCATCCCTTTCAGGAAcact                                                                                                                                 >  2:4769897/1‑150 (MQ=37)
                       gtttttGATTTTTTGGCGCCTGGGCGGGCCTGTTGGGGGGTACCCCCGTTCCTACTGTGGGCGTAATGCCTTGGGGGGGTTCCGGTCGTTGGTGCGGGTTTACCGGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTca                                                                                                                               <  2:4123616/147‑1 (MQ=255)
                           ttGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGGGGGCGTAATGCCATGGGGCGGTTCCGGTCGTAGGAGCGGGTTTACCCGCGATGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATg                                                                                                                           <  2:8309706/150‑1 (MQ=255)
                            tGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTACTACAGTGGGCGTAAAGCCATGGGGCGGGTCCCCTCGGAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGGCCAGCATCCCTTTCAGGAACTCACACATGc                                                                                                                          >  2:8441737/1‑150 (MQ=38)
                              atttttgGGCGCCGGGGCCGGCCTCTTCGGGGGTACCCCGGTCCCTCCCGGGGGGGTACTGCCCGGGGGGGGTTCCGGTCGTCGGAGGGGTTTTACCCGGGACGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTc                                                                                                                        <  2:1658088/148‑1 (MQ=255)
                                tttttGGCGCGGGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTGCCCGTCGTAGGAGCGGTTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCaa                                                                                                                      <  2:7663451/150‑1 (MQ=255)
                                tttttGGCGCCTGGGCCGGCCTCTTCGCTGGTAACCCCGTTCCTACAGTGGGCTTAATGCCATGTGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCaa                                                                                                                      <  2:5594273/150‑1 (MQ=39)
                                  tttGGCGCCTGTGCCGGCCTCTTCGCGGGTAAACCCCTTACTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCGTTAAGGAACTCTCACATGCTCAAGa                                                                                                                    >  2:2517253/1‑150 (MQ=38)
                                  tttGGCGCCTGTGCCGCCCTCTTCGGGGTTAACCCCGTTCCTCCTGTGGGCGTAATGCCAGGGGGCGGTTCCCGTGGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGa                                                                                                                    <  2:8203593/150‑1 (MQ=38)
                                   ttGGCGCCTGTGCCGGCCTCTTCGCGGTTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTCCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGAt                                                                                                                   <  2:1876633/150‑1 (MQ=255)
                                    tGGCGCGTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGGGTAATGCCTTGGGGCGGTTCCGGTGGTAGGAGGGGTTTTACCCGCGAAGTGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATc                                                                                                                  <  2:5874939/150‑1 (MQ=255)
                                    tGGCGCCTGTGCCGGCCTCTTCGCGGTTAACCCCGTTCCTCCTGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTTTGAGCGGGTTTACCCGCGAAGTGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATc                                                                                                                  <  2:4548261/150‑1 (MQ=255)
                                    tGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCTTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATc                                                                                                                  <  2:6326050/150‑1 (MQ=255)
                                    tGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGTTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATc                                                                                                                  <  2:6846554/150‑1 (MQ=255)
                                        GCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGCAAAGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGaca                                                                                                              <  2:5847596‑M1/150‑1 (MQ=255)
                                          cTGTGCCGGCCACTTCGCGGGTAAACCCCTTCCAAAAGTGGGCGTAAATCCAAGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCCCGAAGAGGCCGGCACAGGCACAGCATCACATTCAGGAACACTCACATGCTCAAAATAGacaac                                                                                                            >  2:6238468/1‑148 (MQ=25)
                                              GCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTACCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCGTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGc                                                                                                        <  2:605729‑M1/150‑1 (MQ=255)
                                               CCGGCCTCTTCCCGGGTAACCCCCTTCCTACAGTGGGCGTAAAGCCATGGGGCGGTTCCCGGCGGAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCAACCCTTTCAGGAACTCTCACATTCTCAAGATACACACCCTGCa                                                                                                       <  2:5239270‑M1/150‑1 (MQ=255)
                                                CGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCAc                                                                                                      <  2:4779256‑M1/150‑1 (MQ=255)
                                                CGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCAGCAc                                                                                                      <  1:2115153‑M1/150‑1 (MQ=255)
                                                  gccccgtCGCGGGAACCCCCGTGCCGACAGTGGGCGTACGCCCATGGGGCGGTTCCCGTCGCAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCa                                                                                                    <  1:7781836/144‑1 (MQ=37)
                                                  GCCTCTTCGCGGGTAACCCCTTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCa                                                                                                    >  2:1728830‑M1/1‑150 (MQ=255)
                                                   CCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGCAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGcaccgg                                                                                                   <  1:5333296‑M1/150‑3 (MQ=255)
                                                    CTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGt                                                                                                  <  1:6950367‑M1/150‑1 (MQ=255)
                                                    CTCTGCGGGGGTACCCCGGTACCTACTGTGGGCGTATTGCCTGGGGGCGGTTCCCGTCGTTGGCGCGGGTTAACCCGCGACGCGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGt                                                                                                  >  1:1885871‑M1/1‑150 (MQ=255)
                                                     TCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGta                                                                                                 <  2:4232110‑M1/150‑1 (MQ=255)
                                                     TCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGta                                                                                                 <  2:8288897‑M1/150‑1 (MQ=255)
                                                       ttcgcgggtaaacccgctcctacgacgggaaccgccccatggcattacgcccactgtaggaacggggttacccgcgaagaggccggcacaggcACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGtact                                                                                               >  1:8203803‑M2/94‑150 (MQ=255)
                                                       TTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGtact                                                                                               <  2:1816006‑M1/150‑1 (MQ=255)
                                                        TCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGtacta                                                                                              <  2:1254176‑M1/150‑1 (MQ=255)
                                                          GCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTAcg                                                                                            <  2:5617845‑M1/150‑1 (MQ=255)
                                                           cgggtaaacccgctcctacgacgggaaccgccccatggcattacgcccactgtaggaacggggttacccgcgaagaggccggcacaggcACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTAcgg                                                                                           >  2:5251603‑M2/90‑150 (MQ=255)
                                                            ggttacccccTTTCCTACCGTGGGCTTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTAcggc                                                                                          <  1:1613012/144‑1 (MQ=39)
                                                            GGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTAcggc                                                                                          <  2:6433309‑M1/150‑1 (MQ=255)
                                                            GGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTAcggc                                                                                          <  2:3919668‑M1/150‑1 (MQ=255)
                                                            GGGTAACCCCGTTCCTACAGGGGGCGTATTGCCATGGGGCGGTTCCGGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTAcggc                                                                                          >  2:1296873‑M1/1‑150 (MQ=255)
                                                             GGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTAcggcg                                                                                         >  2:7164446‑M1/1‑150 (MQ=255)
                                                             GGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTAcggcg                                                                                         >  2:6992973‑M1/1‑150 (MQ=255)
                                                               TAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACggcggc                                                                                       <  2:3251092‑M1/150‑1 (MQ=255)
                                                               TAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACggcggc                                                                                       <  1:7686574‑M1/150‑1 (MQ=255)
                                                                  ccccGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGc                                                                                    >  2:6354932/1‑150 (MQ=255)
                                                                  ccccGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGc                                                                                    >  1:6036522/1‑150 (MQ=255)
                                                                   cccgctcctacgacgggaaccgccccatggcattacgcccactgtaggaacggggttacccgcgaagaggccggcacaggcACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGcc                                                                                   >  1:2971632‑M2/82‑150 (MQ=255)
                                                                   cccGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGcc                                                                                   >  1:2674164/1‑150 (MQ=255)
                                                                    ccGTTCCTACTGGGGGCGTAATGCCTTGGGGCGGTTCCCGTCGTCGGCGGGGGTTCACCCGCGACGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCca                                                                                  <  1:1635198/150‑1 (MQ=255)
                                                                     cGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTCCACCAGTACTACGGCGGCAGCcac                                                                                 >  2:3028507/1‑150 (MQ=255)
                                                                          cTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCt                                                                            >  2:4005267/1‑150 (MQ=255)
                                                                           tACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAg                                                                                                                                        <  2:2225321/89‑1 (MQ=255)
                                                                           tACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTg                                                                           >  1:6414420/1‑150 (MQ=255)
                                                                           tACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCACAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACAACCTg                                                                           >  1:6601347/1‑150 (MQ=255)
                                                                            acgacgggaaccgccccatggcattacgcccactgtaggaacggggttacccgcgaagaggccggcacaggcACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTgc                                                                          >  2:112231‑M2/73‑150 (MQ=255)
                                                                            aCAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTgc                                                                          >  1:7658907/1‑150 (MQ=255)
                                                                              aGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTgcgc                                                                        >  2:6170669/1‑150 (MQ=255)
                                                                              aGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTgcgc                                                                        >  1:7191697/1‑150 (MQ=255)
                                                                                tGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCgg                                                                      >  2:851251/1‑150 (MQ=255)
                                                                                   gCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCt                                                                   >  2:4436955/1‑150 (MQ=255)
                                                                                     gTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGt                                                                 >  1:1514136/1‑150 (MQ=255)
                                                                                     gTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGt                                                                 >  1:4640612/1‑150 (MQ=255)
                                                                                      tAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTc                                                                >  1:6080448/1‑150 (MQ=255)
                                                                                           ccATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTCCTTCg                                                           >  1:4132522/1‑150 (MQ=255)
                                                                                            cATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTCCTTCGa                                                          >  1:977918/1‑150 (MQ=255)
                                                                                                     gTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTCCTTCGAAGCCAAGAt                                                 >  2:2682115/1‑150 (MQ=255)
                                                                                                         ccGTCGTAGGAGCGGTTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTCCTTCGAAGCCAAGATCGGc                                             <  1:2327914/150‑1 (MQ=255)
                                                                                                         ccGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTCCTTCGAAGCCAAGATCGGc                                             <  1:7302496/150‑1 (MQ=255)
                                                                                                           gtcgtTGGCGCGGGTTTCCCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTCCTTCGAAGCCAAGATCGGCGa                                           <  1:8327582/150‑1 (MQ=255)
                                                                                                           gtcgtAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTCCTTCGAAGCCAAGATCGGCGa                                           >  1:3435090/1‑150 (MQ=255)
                                                                                                               gaGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGAGCGACACCCTGCACCAGTACTACGGCGGCCGCCACATCCTGCGCGGCCTGTCCTGCGCAGCCAAGATCGGCgccgtg                                       >  2:7973557/2‑145 (MQ=39)
                                                                                                                 ggAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTCCTTCGAAGCCAAGATCGGCGAAGTGAc                                     >  1:6505247/1‑150 (MQ=255)
                                                                                                                  gAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTCCTTCGAAGCCAAGATCGGCGAAGTGAcc                                    >  1:6840378/1‑150 (MQ=255)
                                                                                                                          ttccccgcgaagaggccggcacaggcACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTCCTTCGAAGCCAAGATCGGCGAAGTGACCTGCctgct                            <  1:1006240‑M2/124‑1 (MQ=255)
                                                                                                                           cccccgcgacgaggccggcacaggcACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTCCTTCGAAGCCAAGATCGGCGAAGTGACCTGCctgctg                           <  1:3747169‑M2/125‑1 (MQ=255)
                                                                                                                              ccgcgaagaggccggcacaggcACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTCCTTCGAAGCCAAGATCGGCGAAGTGACCTGCCTGCTGGGc                        >  1:258443‑M2/23‑150 (MQ=255)
                                                                                                                              ccgcgaagaggccggcacaggcACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTCCTTCGAAGCCAAGATCGGCGAAGTGACCTGCCTGCTGGGc                        >  2:439417‑M2/23‑150 (MQ=255)
                                                                                                                              ccgcgaagaggccggcacaggcACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTCCTTCGAAGCCAAGATCGGCGAAGTGACCTGCCTGCTGGGc                        >  1:3910924‑M2/23‑150 (MQ=255)
                                                                                                                               cgcgaagaggccggcacaggcACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTCCTTCGAAGCCAAGATCGGCGAAGTGACCTGCctgctg                           <  2:7326614‑M2/125‑1 (MQ=255)
                                                                                                                                gcgaagtggccgtcacagtcACAGCATCCCTTTCAGGAACTCTCAAATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGACTGTCCTTCGAAGCCAAGATCGGCGAAGTTACCTGCCTGCTGGGCCg                      <  2:1593976‑M2/130‑1 (MQ=255)
                                                                                                                                  gaagaggccggcacaggcACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTCCTTCGAAGCCAAGATCGGCGAAGTGACCTGCCTGCTGGGCCGCa                    >  1:2804289‑M2/19‑150 (MQ=255)
                                                                                                                                      aggccggcacaggcACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTCCTTCGAAGCCAAGATCGGCGAAGTGACCTGCCTGCTGGGCCGCAACgg                >  2:3143688‑M2/15‑150 (MQ=255)
                                                                                                                                       ggccggcacaggcACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTCCTTCGAAGCCAAGATCGGCGAAGTGACCTGCCTGCTGGGCCGCAACGGc               <  2:163270‑M2/137‑1 (MQ=255)
                                                                                                                                        gccggcacaggcACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTCCTTCGAAGCCAAGATCGGCGAAGTGACCTGCCTGCTGGGCCGCAACGGCg              >  2:118321‑M2/13‑150 (MQ=255)
                                                                                                                                          cggcacaggcACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTCCTTCGAAGCCAAGATCGGCGAAGTGACCTGCCTGCTGGGCCGCAACGGCGTg            <  1:5847596‑M2/140‑1 (MQ=255)
                                                                                                                                               caggcACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTCCTTCGAAGCCAAGATCGGCGAAGTGACCTGCCTGCTGGGCCGCAACGGCGTGGGCaa       <  1:1465211‑M2/145‑1 (MQ=255)
                                                                                                                                               caggcACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTCCTTCGAAGCCAAGATCGGCGAAGTGACCTGCCTGCTGGGCCGCAACGGCGTGGGCaa       <  1:3512781‑M2/145‑1 (MQ=255)
                                                                                                                                               caggcACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTCCTTCGAAGCCAAGATCGGCGAAGTGACCTGCCTGCTGGGCCGCAACGGCGTGGGCaa       <  1:468437‑M2/145‑1 (MQ=255)
                                                                                                                                                aggcACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTCCTTCGAAGCCAAGATCGGCGAAGTGACCTGCCTGCTGGGCCGCAACGGCGTGGGCAAg      >  2:5056461‑M2/5‑150 (MQ=255)
                                                                                                                                                 ggcACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTCCTTCGAAGCCAAGATCGGCGAAGTGACCTGCCTGCTGGGCCGCAACGGCGTGGGCAAGa     <  1:4776360‑M2/147‑1 (MQ=255)
                                                                                                                                                    acagCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTCCTTCGAAGCCAAGATCGGCGAAGTGACCTGCCTGCTGGGCCGCAACGGCGTGGGCAAGaccg  >  1:4001195/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
GAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTCCTTCGAAGCCAAGATCGGCGAAGTGACCTGCCTGCTGGGCCGCAACGGCGTGGGCAAGACCA  >  NC_002947/5518199‑5518496

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.