New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4813173 | 0 (0.000) | 16 (1.080) | 6/204 | NT | 51.6% | intergenic (‑288/‑267) | PP_4234/dsbD‑II | bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2 |
? | NC_002947 | = 5993954 | 30 (2.030) | intergenic (+243/‑303) | kefB‑III/PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
GGAATTCGCGCTTTGGCGGGTAGGTGTTTGGCGGGAGGTTTTCAGCGCCTGGGAGGTGTTCGCCGGGGGATTTTCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGGGAGATCGAGCGCCGCCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCTGAAAATCCTCCGGCAAACACCTCAAAATTCCAACGCCGTCCACTCAAAATTCCAACGCCGCCCCCTCAAAATTCCAACGCCGCCTCCCCT > NC_002947/4813038‑4813300 | tgaATTCGCGCTTTGGCGGGTAGGTGTTTGGCGGGAGGTTTTCAGCGCCTGGGAGGTGTTCGCCGGGTGATTTTCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGGGAGATCGAGCGCCGCCCGCG < 2:341401‑M1/135‑1 (MQ=255) ggAATTCGCGCTTTGGCGGGTAGGTGTTTGGCGGGAGGTTTTCAGCGCCTGGGAGGTGTTCGCCGGGGGATTTTCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGTGAGATCGAGCGCCGCCCGCG < 1:120528‑M1/136‑1 (MQ=255) cgcgCTTTGGCGGGTAGGTGTTTGGCGGGAGGTTTTCAGCGCCTGGGAGGTGTTCGCCGGGGGATTTTCAGCGCCGGGGAGGGGTTCGCCGGGAGAGTTTCAGCGCCTGGGAGATCGAGCGCCGCCCGCGcggcgc < 1:268709‑M1/136‑7 (MQ=255) cgcgCTTTGGCGGGTAGGGGTTTGGCGGGAGGTTTTCAGCGCCTGGGAGGTGTTCGCCGGGGTTTTTTCAGCGCCTGGGAGGTGTTCGCGGGGAGAGTTTCAGCGCCTGGGAGATCGAGCGCCGCCCGCGcggcgc < 1:95604‑M1/136‑7 (MQ=255) ttttCAGCGCCTGGGAGGTGTTCGCCGGGGGATTTTCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGGGAGATCGAGCACCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttc < 1:296473‑M1/136‑39 (MQ=255) gtgGGCGGGGTGCGCCGGGGGATTTTCTGCGCCGGGGAGGTGTTCGCCGGGAGCGTTTCAGCGCCTGGGAGATCGCGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcggccagtccc < 1:378350‑M1/135‑49 (MQ=255) gtgGGAGGTGTTCGCCGGGGGATTTTCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGTGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcggccagtccc < 1:14714‑M1/135‑49 (MQ=255) gtgGGAGGTGTTCGCCGGGGGATTTTCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGGGAGATCGAGCGCCGCCCGCGgggcgcttcgcgggtaaacccgctcctacgtttgtttcggccagtccc < 1:233076‑M1/135‑49 (MQ=255) gggggtgGTGTTCGCGGGGGGTTTTTCAGCGCCTGGGTGGTGTTCGCCGGGAGAGTTTCAGCGCCTGGGATATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcggccagtccc < 1:303702‑M1/134‑49 (MQ=255) cTGGGAGGTGTTCGCCGGGGGATTTTCAGCGCCTGGGAGGTGTTCGCCGGGTGAGTTTCAGCGCCTGGGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcggccagtccc < 2:287269‑M1/136‑49 (MQ=255) cTGGGAGGTGTTCGCCGGGGGATTTTCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGGGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcggccagtccc < 2:129459‑M1/136‑49 (MQ=255) ggAGGTGTTCGCCGGGGGATTTTCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGGGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattattc > 2:188247‑M1/1‑85 (MQ=255) cTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGGGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattattcctgcgggatttgcgcgcgaccgccttggg < 1:188247‑M1/136‑81 (MQ=255) aGGTGTTTGCCGGAGGATTTTCAGCGCCTGTGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcggccagtccctcctgcaccagtcgcgcgcgaccgccttgtttgtacg < 1:437977‑M1/136‑86 (MQ=255) gCCGGGAGAGTTTCAGCGCCTGTGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcggccagtccc > 1:379295‑M1/1‑43 (MQ=255) gCCGGGAGAGTTTCAGCGCCTGTGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcggccagtccc < 2:379295‑M1/91‑49 (MQ=255) gtagtgcctgtgAGATTGGGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttctggccaatccctcctgtgccaggcgcgcgcgaccgccttgttagtacgacgcgatatcgaggcgtgc > 2:361416‑M1/6‑31 (MQ=255) gtagtgcctgtgAGATTGGGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttctggccaatccctcctgtgccacgcgcgcgcgacccccttgttactaccacgcgatatcgaggcgtgc > 2:363863‑M1/6‑31 (MQ=255) ccTGGGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaatt < 2:260539‑M1/72‑48 (MQ=255) ccTGGGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaatt > 1:260539‑M1/1‑25 (MQ=255) gattgggcgccgcccgCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaatccctcctgtgccaggcgcgcgcgaccgccttgtttgtacgacgcgatatcgaggcgtgcgccagggggctcg < 1:34465‑M1/130‑119 (MQ=255) gagtgggcgccgcccgCGcggcgcttcgcgggtaaacccgctcctacgcttgtttctggccaatccctcctgtgccaggcgcgcgcgaccgccttgtttgtacgacgcgatatcgaggcgtgcgccagggggctcg < 2:236301‑M1/130‑119 (MQ=255) ccgcccgcGcggcgcttcgcgggtaaacccgctcctacgtttgtttctggccaatccctcctgtgccaggcgcgcgcgaccgccttgtttgtacgacgcgatatcgaggcgtgcgccagggggctcgcgtgcgcgt < 2:179063‑M1/136‑128 (MQ=255) ccgcccgcGcggcgcttcgcgggtaaacccgctcctacgtttgtttctggccaatccctcctgtgccaggcgcgcgcgaccgccttgtttgtacgacgcgatatcgaggcgtgcgccagggggctcgcgtgcgcgt < 2:501417‑M1/136‑128 (MQ=255) ccgcccgcGcggcgcttcgcgggtaaacccgctcctacgtttgtttctggccaatccctcctgtgccaggcgcgcgcgacccccttgttagtacgacgcgatatcgaggcgtgcgccagggggctcgcgtgcgcgt < 1:363863‑M1/136‑128 (MQ=255) ccgcccgcGcggcgcttcgcgggtaaacccgctcctacgtttgtttctggccaatccctcctgtgccaggcgcgcgcgacccccttgttagtacgacgcgatatcgaggcgtgcgccagggggctcgcgtgcgcgt < 1:361416‑M1/136‑128 (MQ=255) | GGAATTCGCGCTTTGGCGGGTAGGTGTTTGGCGGGAGGTTTTCAGCGCCTGGGAGGTGTTCGCCGGGGGATTTTCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGGGAGATCGAGCGCCGCCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCTGAAAATCCTCCGGCAAACACCTCAAAATTCCAACGCCGTCCACTCAAAATTCCAACGCCGCCCCCTCAAAATTCCAACGCCGCCTCCCCT > NC_002947/4813038‑4813300 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |