| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4813152 | 0 (0.000) | 11 (0.490) | 5/264 | 1.0 | 34.4% | intergenic (‑267/‑288) | PP_4234/dsbD‑II | bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2 |
| ? | NC_002947 | = 5993975 | 42 (1.870) | intergenic (+264/‑282) | kefB‑III/PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA | |||||
ATGGGCGGAATTCGCGCTTTGGCGGGTAGGTGTTTGGCGGGAGGTTTTCAGCGCCTGGGAGGTGTTCGCCGGGGGATTTTCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGGGAGATCGAGCGCCGCCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCTGAAAATCCTCCGGCAAACACCTCAAAATTCCAACGCCGTCCAC > NC_002947/4813032‑4813253 | aTGGGCGGAATTCGCGCTTTGGCGGGTAGGTGTTTGGCGGGAGGTTTTCAGCGCCTGGGAGGTGTTCGCCGGGGGATTTTCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGTgagatcgagcgccg < 1:422757‑M2/136‑15 (MQ=255) gCGGAATTCGCGCTTTGGCGGGTAGGTGTTTGGCGGGAGGTTTTCAGCGCCTGGGAGGTGTTCGCCGGGGGATTTTCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGGgagatcgagcgccgcccg < 1:78041‑M2/136‑19 (MQ=255) ggcgctTTGGCGGGTAGGTGTTTGGCGGGAGGTTTTCAGCGCCTGGGAGGTGTTCGCCGGGGTATTTTCAGCGCCGGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGGgagatcgagcgccgcccgcgcggcgc > 1:446683‑M2/2‑110 (MQ=255) gcgcTTTGGCGGGTAGGTGTTTGGCGGGAGGTTTTCAGCGCCTGGGAGGTGTTCGCCGGGGGATTTTCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGGgagatcgagcgccgcccgcgcggcgct > 2:223032‑M2/1‑109 (MQ=255) cGGGTAGGTGTTTGGCGGGAGGTTTTCAGCGCCTGGGAGGTGTTCGCCGGGGGATTTTCAGCGCCTGGGAGGTGTTCGCCGGGATAGTTTCAGCGCCTGGgagatcgagcgccgcccgcgcggcgcttcgcgggta > 1:51150‑M2/1‑100 (MQ=255) ggTAGGTGTTTGGCGGGAGGTTTTCAGCGCCTGGGAGGTGTTCGCCGGGGGATTTTCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGGgagatcgagcgccgcccgcgcggcgcttcgcggctaaa < 1:541948‑M2/136‑39 (MQ=255) tGGCGGGAGGTTTTCAGCGCCTGGGAGGTGTTCGCCGGGGGATTTTCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGTgagatcgagcgccgcccgcgcggcgcttcgcgggtaaacccgctccta < 2:359445‑M2/136‑49 (MQ=255) ggTTTTCTGCGCCTGGGTGGTTTTCGCCGGGGGTTTTTCTGCGCCTGGGTGGTGTTCGCCGGGAGTGTTTCAGCGCCTGGgagatcgtgcgccgcccgcgcggcgcttcgcgggtaaacccgctcctacgtttgtt > 2:541948‑M2/1‑80 (MQ=255) gTTTTCAGCGCCTGGGAGGTGTTGGCGGGGGGATTTTCAGCGCCTGGGAGGTGTGCGCCGGGAGAGTTTCAGCGCCTGTgagatcgagcgccgcccgcgcggcgcttcgcgggtaaacccgctcctacgtttgttt > 2:455914‑M2/1‑79 (MQ=255) gtgggtggggTTGGCCGGGGTATTTTCAGCGCCTGGGAGGGGTTCGCCGGGTGAGTTTCAGCGCCTGtgagatcgagcgccgcccgcgcggggcttcgcgggtaaacccgctcctacgtttgtttcggccagtccc < 2:422757‑M1/135‑70 (MQ=255) gtgGGTGGTGTTCGCCGGGGGATTTTCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGtgagatcgagcgccgcccgcgcggcgcttcgcgggtaaacccgctcctacgtttgtttcggccagtccc < 1:427326‑M1/135‑70 (MQ=255) gggggtgGTGTTCGCCGGGGTTTTTTCAGCGCCTGGGAGGTGTTCGCGGGGATAGTTTCAGGGCCTGtgagatcgtgcgccgccggcgcggcgcttcgcgggtaaacccgctcctacgtttgtttcggccagtccc < 1:129769‑M1/134‑70 (MQ=255) cTGGGAGGTGTTCGCCGGGGGATTTTCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGtgagatcgagcgccgcccgcgcggcgcttcgcgggtaaacccgctcctacgtttgtttcggccagtccc < 1:359445‑M1/136‑70 (MQ=255) tttgaggTGTTCGCCGGGGGATTTACAGCGCCCGGTAGGTGTTCGCCGGGATAGTTTCAGCGCCTGGgagatcgcgcgccgcccgcgcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattat > 2:141111‑M2/4‑67 (MQ=255) ttCGCCGGGGGATTTTCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGtgagatcgagcgccgcccgcgcggcgcttcgcgggtaaacccgctcctacgtttgtttcggccagtccc > 1:149372‑M1/1‑57 (MQ=255) ttCGCCGGGGGATTTTCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGtgagatcgagcgccgcccgcgcggcgcttcgcgggtaaacccgctcctacgtttgtttcggccagtccc < 2:149372‑M1/126‑70 (MQ=255) gCCGGGGGATTTTCAGCGCCTGGGAGGCGTTCGCCGGGAGAGTTTCAGCGCCTGGgagatcgagcgccgcccgcgcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattat < 2:464937‑M2/124‑70 (MQ=255) gCCGGGGGATTTTCAGCGCCTGGGAGGCGTTCGCCGGGAGAGTTTCAGCGCCTGGgagatcgagcgccgcccgcgcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattat > 1:464937‑M2/1‑55 (MQ=255) gCCGGGGGATTTTCAGCGCCCGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGGgagatcgagcgccgcccgcgcggcgcttcgcgggtaaacccgctcctaagtttgtttagggccaattattcctgcgggatt < 1:141111‑M2/136‑82 (MQ=255) gtgGTAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGggagatcgagcgccgcccgcgcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattattcctgcgggatttgcgcgcgaccgccttggg < 2:435351‑M1/135‑102 (MQ=255) tttGCCGGAGGATTTTCAGCGCCTGTgagatcgagcgccgcccgcgcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattat > 2:430522‑M2/1‑26 (MQ=255) tttGCCGGAGGATTTTCAGCGCCTGTgagatcgagcgccgcccgcgcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattat < 1:430522‑M2/95‑70 (MQ=255) gCCGGGAGAGTTTCAGCGCCTGtgagatcgagcgccgcccgcgcggcgcttcgcgggtaaacccgctcctacgtttgtttcggccagtccc < 1:34834‑M1/91‑70 (MQ=255) gCCGGGAGAGTTTCAGCGCCTGtgagatcgagcgccgcccgcgcggcgcttcgcgggtaaacccgctcctacgtttgtttcggccagtccc > 2:34834‑M1/1‑22 (MQ=255) gcCTGGgagatcgagcgccgcccgcgcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattatt < 1:117325‑M2/76‑71 (MQ=255) gcCTGGgagatcgagcgccgcccgcgcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattatt > 2:117325‑M2/1‑6 (MQ=255) gcCTGGgagatcgagcgccgcccgcgcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattat > 1:3133‑M2/1‑6 (MQ=255) gcCTGGgagatcgagcgccgcccgcgcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattat < 2:3133‑M2/75‑70 (MQ=255) ccTGTgagatcgagcgccgcccgcgcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattat > 2:64522‑M2/1‑5 (MQ=255) ccTGTgagatcgagcgccgcccgcgcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattat < 2:425626‑M2/74‑70 (MQ=255) ccTGTgagatcgagcgccgcccgcgcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattat > 2:389371‑M2/1‑5 (MQ=255) ccTGTgagatcgagcgccgcccgcgcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattat > 2:358246‑M2/1‑5 (MQ=255) ccTGTgagatcgagcgccgcccgcgcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattat > 1:425626‑M2/1‑5 (MQ=255) ccTGTgagatcgagcgccgcccgcgcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattat > 2:303530‑M2/1‑5 (MQ=255) ccTGTgagatcgagcgccgcccgcgcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattat < 1:358246‑M2/74‑70 (MQ=255) ccTGTgagatcgagcgccgcccgcgcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattat < 1:303530‑M2/74‑70 (MQ=255) ccTGTgagatcgagcgccgcccgcgcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattat < 1:64522‑M2/74‑70 (MQ=255) ccTGTgagatcgagcgccgcccgcgcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattat < 1:389371‑M2/74‑70 (MQ=255) ccTGTgagatcgagcgccgcccgcgcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaatta > 2:395098‑M2/1‑5 (MQ=255) ccTGTgagatcgagcgccgcccgcgcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaatta < 1:395098‑M2/73‑69 (MQ=255) ccTGGgagatcgagcgccgcccgcgcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattattc < 2:233409‑M2/76‑72 (MQ=255) ccTGGgagatcgagcgccgcccgcgcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattattc > 1:233409‑M2/1‑5 (MQ=255) ccTGGgagatcgagcgccgcccgcgcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattat > 2:497504‑M2/1‑5 (MQ=255) ccTGGgagatcgagcgccgcccgcgcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattat > 2:543312‑M2/1‑5 (MQ=255) ccTGGgagatcgagcgccgcccgcgcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattat > 2:66910‑M2/1‑5 (MQ=255) ccTGGgagatcgagcgccgcccgcgcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattat > 2:300955‑M2/1‑5 (MQ=255) ccTGGgagatcgagcgccgcccgcgcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattat < 1:300955‑M2/74‑70 (MQ=255) ccTGGgagatcgagcgccgcccgcgcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattat < 1:66910‑M2/74‑70 (MQ=255) ccTGGgagatcgagcgccgcccgcgcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattat < 1:543312‑M2/74‑70 (MQ=255) ccTGGgagatcgagcgccgcccgcgcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattat < 1:497504‑M2/74‑70 (MQ=255) cTGtgagatcgagcgccgcccgcgcggcgcttcgcgggtaaacccgctcctacgtttgtttc > 2:335017‑M1/1‑3 (MQ=255) cTGtgagatcgagcgccgcccgcgcggcgcttcgcgggtaaacccgctcctacgtttgtttc < 1:335017‑M1/62‑60 (MQ=255) | ATGGGCGGAATTCGCGCTTTGGCGGGTAGGTGTTTGGCGGGAGGTTTTCAGCGCCTGGGAGGTGTTCGCCGGGGGATTTTCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGGGAGATCGAGCGCCGCCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCTGAAAATCCTCCGGCAAACACCTCAAAATTCCAACGCCGTCCAC > NC_002947/4813032‑4813253 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |