| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_002947 | 1,515,811 | (33-bp)2→1 | pseudogene (715‑747/1851 nt) | PP_1325 ← | putative lipoprotein |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_002947 | 1515769 | 1515801 | 33 | 32 [0] | [0] 32 | PP_1325 | putative lipoprotein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1515802 = | 0 (0.000) | 23 (2.150) | 12/180 | 0.1 | 100% | pseudogene (756/1851 nt) | PP_1325 | putative lipoprotein |
| ? | NC_002947 | = 1515768 | 0 (0.000) | pseudogene (790/1851 nt) | PP_1325 | putative lipoprotein | |||||
AGACCCTGGCTGGCTGGACCAGCCTGGCCTTCGCCGTGAAAAGCGCCGGCACCCTGGAGCAGCAGCAAGCGGCCATCGAAGCCTGGGTCAAACAGCACCCGGACCACCCTGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGAGCTGGCCAGCCAGCCGCTGACCAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1515977‑1515802‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgaccaagctcaaggagctggccagccagccgctgaccaagATCGCCCTGCTGCTGCCTCAGGAAGGCCCGCTGGCCGGTGTAGCCCGCGCCCTGCGCGATGGCTTCATGGCCGCCCACTTCCAGGCCCAGCAAAGCGGCCAGCCAGCGCCTGCGG < NC_002947/1515768‑1515654 AGACCCTGGCTGGCTGGACCAGCCTGGCCTTCGCCGTGAAAAGCGCCGGCACCCTGGAGCAGCAGCAAGCGGCCATCGAAGCCTGGGTCAAACAGCACCCGGACCACCCTGCCGCCCAGCAACTGCCGCTGGCCCT > 2:155239/1‑136AGACCCTGGCTGGCTGGACCAGCCTGGCCTTCGCCGTGAAAAGCGCCGGCACCCTGGAGCAGCAGCAAGCGGCCATCGAAGCCTGGGTCAAACAGCACCCGGACCACCCTGCCGCCCAGCAACTGCCGCTGGCCCT < 1:62278/136‑1AGACCCTGGCTGGCTGGACCAGCCTGGCCTTCGCCGTGAAAAGCGCCGGCACCCTGGAGCAGCAGCAAGCGGCCATCGAAGCCTGGGTCAAACAGCACCCGGACCACCCTGCCGCCCAGCAACTGCCGCTGGCCCT < 1:285473/136‑1 CTGGCTGGACCAGCCTGGCCTTCGCCGTGAAAAGCGCCGGCACCCTGGAGCAGCAGCAAGCGGCCATCGAAGCCTGGGTCAAACAGCCCCCGGCCCCCCCTGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCT > 2:49354/1‑136 GCTGGACCAGCCTGGCCTTCGCCGTGAAAAGCGCCGGCACCCTGGAGCAGCAGCAAGCGGCCATCGAAGCCTGGGTCAAACAGCACCCGGACCACCCTGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAA < 2:79045/136‑1 GGACCAGCCTGGCCTTCGCCGTGAAAAGCGCCGGCACCCTGGAGCAGCAGCAAGCGGCCATCGAAGCCTGGGTCAAACAGCACCCGGACCACCCTGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGA > 2:8378/1‑136 GGACCAGCCTGGCCTTCGCCGTGAAAAGCGCCGGCACCCTGGAGCAGCAGCAAGCGGCCATCGAAGCCTGGGTCAAACAGCACCCGGACCACCCTGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGA > 2:277587/1‑136 GGACCAGCCTGGCCTTCGCCGTGAAAAGCGCCGGCACCCTGGAGCAGCAGCAAGCGGCCATCGAAGCCTGGGTCAAACAGCACCCGGACCACCCTGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGA > 2:183265/1‑136 CCAGCCTGGCCTTCGCCGTGAAAAGCGCCGGCACCCTGGAGCAGCAGCAAGCGGCCATCGAAGCCTGGGTCAAACAGCACCCGGACCACCCTGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGAGCT > 1:75562/1‑136 AAAGCGCCGGCACCCTGGAGCAGCAGCAAGCGGCCATCGAAGCCTGGGTCAAACAGCACCCGGACCACCCTGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGAGCTGGCCAGCCAGCCGCGGACCAA > 1:368056/1‑136 CACCCTGGAGCAGCAGCAAGCGGCCATCGAAGCCTGGGTCAAACAGCACCCGGACCACCCTGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGAGCTGGCCAGCCAGCCGCTGACCAAGATCGCCCTG < 2:24312/136‑1 CACCCTGGAGCAGCAGCAAGCGGCCATCGAAGCCTGGGTCAAACAGCACCCGGACCACCCTGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGAGCTGGCCAGCCAGCCGCTGACCAAGATCGCCCTG < 1:393260/136‑1 ACCCTGGAGCAGCAGCAAGCGGCCATCGAAGCCTGGGTCAAACAGCACCCGGACCACCCTGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCTAGGAGCTGGCCAGCCAGCCGCTGACCAAGATCGCCCTGC < 1:210093/136‑1 CAAGCGGCCATCGAAGCCTGGGTCAAACAGCACCCGGACCACCCTGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGAGCTGGCCAGCCAGCCGCTGACCAAGATCGCCCTGCTGCTGCCTCAGGAAG > 1:202299/1‑136 CAAGCGGCCATCGAAGCCTGGGTCAAACAGCACCCGGACCACCCTGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGAGCTGGCCAGCCAGCCGCTGACCAAGATCGCCCTGCTGCTGCCTCAGGAAG > 1:57115/1‑136 CAAGCGGCCATCGAAGCCTGGGTCAAACAGCACCCGGACCACCCTGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGAGCTGGCCAGCCAGCCGCTGACCAAGATCGCCCTGCTGCTGCCTCAGGAAG > 1:173172/1‑136 CAAGCGGCCATCGAAGCCTGGGTCAAACAGCACCCGGACCACCCTGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGAGCTGGCCAGCCAGCCGCTGACCAAGATCGCCCTGCTGCTGCCTCAGGAAG > 2:197542/1‑136 CAAGCGGCCATCGAAGCCTGGGTCAAACAGCACCCGGACCACCCTGCCGCCCAGCAACTGCCGCAGGCCCTGACCAAGCTCAAGGAGCTGGCCAGCCAGCCGCTGACCAAGATCGACCTGCTGCTGCCTCTCGAAG > 1:206152/1‑136 CCATCGAAGCCTGGGTCAAACATCACCCGGACCACCCTGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGAGCTGGCCAGCCAGCCGCTGACCAAGATCGCCCTGCTGCTGCCTCAGGAAGGCCCGCT < 2:11310/136‑1 CCATCGAAGCCTGGGTCAAACAGCACCCGGACCACCCTGCCGCCCAGCAACTGCCGCTGGCCCTGACCCAGCTCAAGGAGCTGGCCAGCCAGCCGCTGACCAAGATCGCCCTGCTGCTGCCTCAGGAAGGCCCGCT < 2:44511/136‑1 CATCGAAGCCTGGGTCAAACAGCACCCGGACCACCCTGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGAGCTGGCCAGCCAGCCGCTGACCAAGATCGCCCTGCTGCTGCCTCAGGAAGGCCCGCTG < 2:251777/136‑1 AACAGCACCCGGACCACCCTGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGAGCTGGCCAGCCAGCCGCTGACCAAGATCGCCCTGCTGCTGCCTCAGGAAGGCCCGCTGGCCGGTGTAGCCCGCGC < 1:299119/136‑1 CCCGGACCACCCTGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGAGCTGGCCAGCCAGCCGCTGACCAAGATCGCCCTGCTGCTGCCTCAGGAAGGCCCGCTGGCCGGTGTAGCCCGCGCCCTGCGC < 2:75562/136‑1 CCGGACCACCCTGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGAGCTGGCCAGCCCGCCGCTGACCAAGATCGCCCTGCTGCTGCCTCAGGAAGGCCCGCTGGCCGGTGTAGCCCGCGCCCTGCGCG > 2:344463/1‑136 CCGGACCACCCTGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGAGCTGGCCAGCCAGCCGCTGACCAAGATCGCCCTGCTGCTGCCTCAGGAAGGCCCGCTGGCCGGTGTAGCCCGCGCCCTGCGCG > 1:298539/1‑136 CACCCTGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGAGCTGGCCAGCCAGCCGCTGACCAAGATCGCCCTGCTGCTGCCTCAGGAAGGCCCGCTGGCCGGTGTAGCCCGCGCCCTGCGCGATGGCT > 2:134424/1‑136 CACCCTGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGAGCTGGCCAGCCAGCCGCTGACCAAGATCGCCCTGCTGCTGCCTCAGGAAGGCCCGCTGGCCGGTGTAGCCCGCGCCCAGCGCGATGGCg > 1:299763/1‑135 CACCCTGCCGACCAGCAAATGCCGCTGGCCCTGACCAAGCTCAAGGAGCTGGCCAGCCAGCCGCTGACCAAGATCGCCCTGATGCTGCCTCAGGAAGGCCCGCTGGCCGGTGTAGCAAGCGCACTGAGCGATGGCT > 2:399478/1‑136 CTGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGAGCTGGCCAGCCAGCCGCTGACCAA < 2:248955/67‑1 CTGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGAGCTGGCCAGCCAGCCGCTGACCAA > 1:248955/1‑67 TGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGAGCTGGCCAGCCAGCCGCTGACCAAGATCGCCCTGCTGCTGCCTCAGGAAGGCCCGCTGGCCGGTGTAGCCCGCGCCCTGCGCGATGGCTTCATG > 2:239415/1‑136 GCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGAGCTGGCCAGCCAGCCGCTGACCAAGATCGCCCTGCTGCTGCCTCAGGAAGGCCCGCTGGCCGGTGTAGCCCGCGCCCTGCGCGATGGCTTCATGG > 2:206463/1‑136 CGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTGAAGGAGCTGGCCAGCCAGCCGCTGACCAAGATCGCCCTGCTGCTGCCTCAGGAAGGCCCGCTGGCCGGTGTAGCCCGCGCCCTGCGCGATGGCTTCATGGCC < 1:166474/136‑1 CGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGAGCTGGCCAGCCAGCCGCTGACCAAGATCGCCCTGCTGCTGCCTCAGGAAGGCCCGCTGGCCGGTGTAGCCCGCGCCCTGCGCGATGGCTTCATGGCC < 1:155239/136‑1 CGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGAGCTGGCCAGCCAGCCGCTGACCAAGATCGCCCTGCTGCTGCCTCAGGAAGGCCCGCTGGCCGGTGTAGCCCGCGCCCTGCGCGATGGCTTCATGGCC < 1:296696/136‑1 AGGAGCTGGCCAGCCAGCCGCTGACCAAGATCGCCCTGCTGCTGCCTCAGGAAGGCCCGCTGGCCGGTGTAGCCCGCGCCCTGCGCGATGGCTTCATGGCCGCCCACTTCCAGGCCCAGCAAAGCGGCCAGCCAGC < 1:183265/136‑1 AGGAGCTGGCCAGCCAGCCGCTGACCAAGATCGCCCTGCTGCTGCCTCAGGAAGGCCCGCTGGCCGGTGTAGCCCGCGCCCTGCGCGATGGCTTCATGGCCGCCCACTTCCAGGCCCAGCAAAGCGGCCAGCCAGC < 1:8378/136‑1 GAGCTGGCGAGCCAGCCGCTGACCAAGATCGCCCTGCTGCTGCCTGAGGAAGGCACGCTGGCCGGTGTAGCCCGCGCCCTGCGCGATGGCTTCATGGCCGCCCACTTCCAGGCCCAGCAAAGCGGCCAGCCAGCGC < 1:399478/136‑1 GAGCTGGCCAGCCAGCCGCTGACCAAGATCGCCCTGCTGCTGCCTCAGGAAGGCCCGCTGGCCGGTGTAGCCCGCGCCCTGCGCGATGGCTTCATGGCCGCCCACTTCCAGGCCCAGCAAAGCGGCCAGCCAGCGC < 1:134424/136‑1 GCCAGCCAGCCGCTGACCAAGATCGCCCTGCTGCTGCCTCAGGAAGGCCCGCTGGCCGGTGTAGCCCGCGCCCTGCGCGATGGCTTCATGGCCGCCCACTTCCAGGCCCAGCAAAGCGGCCAGCCAGCGCCTGCGG > 1:89812/1‑136 GCCAGCCAGCCGCTGACCAAGATCGCCCTGCTGCTGCCTCAGGAAGGCCCGCTGGCCGGTGTAGCCCGCGCCCTGCGCGATGGCTTCATGGCCGCCCACTTCCAGGCCCAGCAAAGCGGCCAGCCAGCGCCTGCGG > 1:243421/1‑136 GCCAGCCAGCCGCTGACCAAGATCGCCCTGCTGCTGCCTCAGGAAGGCCCGCTGGCCGGTGTAGCCCGCGCCCTGCGCGATGGCTTCATGGCCGCCCACTTCAAGCCCCAGCAAAGCGGCCAGCCAGCGCCTGCGG > 1:52135/1‑136 CCAGCCAGCCGCTGACCAAGATCGCCCTGCTGCTGCCTCAGGAAGGCCCGCTGGCCGGTGTAGCCCGCGCCCTGCGCGATGGCTTCATGGCCGCCCACTTCCAGGCCCAGCAAAGCGGCCAGCCAGCGCCTGCGG < 2:43735/135‑1 CCAGCCAGCCGCTGACCAAGATCGCCCTGCTGCTGCCTCAGGAAGGCCCGCTGGCCGGTGTAGCCCGCGCCCTGCGCGATGGCTTCATGGCCGCCCACTTCCAGGCCCAGCAAAGCGGCCAGCCAGCGCCTGCGG > 1:43735/1‑135 AGACCCTGGCTGGCTGGACCAGCCTGGCCTTCGCCGTGAAAAGCGCCGGCACCCTGGAGCAGCAGCAAGCGGCCATCGAAGCCTGGGTCAAACAGCACCCGGACCACCCTGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGAGCTGGCCAGCCAGCCGCTGACCAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1515977‑1515802‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgaccaagctcaaggagctggccagccagccgctgaccaagATCGCCCTGCTGCTGCCTCAGGAAGGCCCGCTGGCCGGTGTAGCCCGCGCCCTGCGCGATGGCTTCATGGCCGCCCACTTCCAGGCCCAGCAAAGCGGCCAGCCAGCGCCTGCGG < NC_002947/1515768‑1515654 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |