New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1015854	1 (0.060)	7 (0.460)	7/254	0.5	58.4%	intergenic (‑81/‑687)	SBRG_Ecoli_galE/prfC	SBRG_Ecoli_galE/peptide chain release factor 3
	?	NC_002947	= 5067412	9 (0.600)					coding (1092/1098 nt)	PP_4459	transposase

ATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGGAATCGTTTACACAAGAATTTAGCCGTTTTTTATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGG  >  NC_002947/1015729‑1015986                                                                                                                              |                                                                                                                                     aTGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGtcctgactca                                                                                                                            >  1:184259‑M1/1‑126 (MQ=255)                      accaccGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGtcctgtctcagataaaacgttctctttattc                                                                                                       <  2:400500‑M1/136‑32 (MQ=255)                         accGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGtcctgtctcagataaaacgttctctttattctcg                                                                                                    >  2:394866‑M1/1‑102 (MQ=255)                               aaCCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGtcctgtctcagataaaacgttctctttattctcgcgtgcc                                                                                              >  1:117299‑M1/1‑96 (MQ=255)                                   gtcttgagaattcatcgctccaccccgcgtcctgtttgaccaaggaagcgtagctcaaatggaatacttatttttgagacagaacATTAGTGGAATCGTTTACACAAGAATTTAGCCGTTTTTTATGCGCGATTaa                                                                                          <  1:252058‑M1/51‑1 (MQ=255)                                   aGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGtcctgtctcagataaaacgttctctttattctcgcgtgccattg                                                                                          <  2:247101‑M1/136‑45 (MQ=255)                                                                       tgaccaaggaagcgtagctcaaatggaatacttatttttgagacagaacATTAGTGGAATCGTTTACACAAGAATTTAGCCGTTTTTTATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTgcgc                                                      <  1:304255‑M1/87‑1 (MQ=255)                                                                                      agctcaaatggaatacttatttttgagacagaacATTAGTGGAATCGTTTACACAAGAATTTAGCCGTTTTTTATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGaaaaa                                       <  1:371567‑M1/102‑1 (MQ=255)                                                                                        ctcaaatggaatacttatttttgagacagaacATTAGTGGAATCGTTTACACAAGAATTTAGCCGTTTTTTATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAg                                     >  1:409232‑M1/33‑136 (MQ=255)                                                                                        ctcaaatggaatacttatttttgagacagaacATTAGTGGAATCGTTTACACAAGAATTTAGCCGTTTTTTATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAg                                     >  2:252058‑M1/33‑136 (MQ=255)                                                                                         tcaaatggaatacttatttttgagacagaacATTAGTGGAATCGTTTACACAAGAATTTAGCCGTTTTTTATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGa                                    >  2:304255‑M1/32‑136 (MQ=255)                                                                                                tGCGAAAAGTGTGACATGGAATAAATTAGTGtcctgtctcagataaaacgttctctttattctcgcgtgcc                                                                                              >  1:269662‑M1/1‑31 (MQ=255)                                                                                                tGCGAAAAGTGTGACATGGAATAAATTAGTGtcctgtctcagataaaacgttctctttattctcgcgtgcc                                                                                              <  2:269662‑M1/71‑41 (MQ=255)                                                                                                 aatacttattttagagacagaacATTAGTGGAATCGTTTACACAAGAATTTAGCCGTTTTTTATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGttt                            >  2:208908‑M1/24‑136 (MQ=255)                                                                                                                          tAGTGGAATCGTTTACACAAGAATTTAGCCGTTTTTTATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTg   <  2:371567/136‑1 (MQ=255)                                                                                                                           aGTGtcctgtctcagataaaacgttctctttattctcgcgtgccattgcctctcgggcaccctggatcttgcgcaagatgtcttcacctttcgcgctccagacgtaccgagagggttgggcgttgtgcagcgctaa  <  2:10778‑M1/136‑133 (MQ=255)                                                                                                                           aGTGtcctgtctcagataaaacgttctctttattctcgcgtgccattgcctcgcgggcaccctggatcttgcgcaagatgtcttcacctttcgcgctccagacgtaccgagagggttgggcgttgtgcagcgctaa  <  2:372092‑M1/136‑133 (MQ=255)                                                                                                                              |                                                                                                                                     ATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGGAATCGTTTACACAAGAATTTAGCCGTTTTTTATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGG  >  NC_002947/1015729‑1015986

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.