| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 835064 | 279 (0.950) | 15 (0.050) | 8/266 | NT | 5.5% | coding (1018/1713 nt) | PP_0718 | sulfate transporter |
| ? | NC_002947 | = 835114 | 242 (0.850) | coding (968/1713 nt) | PP_0718 | sulfate transporter | |||||
CCAGAACTCCCACTGCTGCATGCGGAAGATACGCTTGAGGTCGGCAAATTCGAACAGCCCCAGTGCAGCGGCAATCACCACCGCAGCCAAAGCGCTGTTAGGCAGGTGCTGCATCAGATTGGGCGCTACCAGCAGCAACAGGGTTAC‑‑‑CGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/834912‑835064‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagTG‑GCCGAAGCTGCCGGCTCGCAGACCCAGCTCACCGGCATCATCGGCGCCCTGGCGGTAACCCTGTTGCTGCTGGTAGCGCCCAATCTGATGCAGCACCTGCCTAACAGCGCTTTGGCTGCGGTGGTGATTGCCGCTGCACTGGGGCTG < NC_002947/835114‑834966 CCAGAACTCCCACTGCTGCATGCGGAGGATACGCTTGAGGTCGGCAAATTCGAACAGCCCCAGTGCAGCGGCAATCACCACCGCAGCCAAAGCGCTGTTAGGCAGGTGCTGCATCAGATTGGGCGCTACCAGCAGCAACAGGGTTAC‑‑‑CGC > 2:245676/1‑150CCAGAACTCCCACTGCTGCATGCGGAAGATACGCTTGAGGTCGGCAAATTCGAACAGCCCCAGTGCAGCGGCAATCACCACCGCAGCCAAAGCGCTGTTAGGCAGGTGCTGCATCAGATTGGGCGCTACCAGCAGCAACAGGGTTAC‑‑‑CGC > 1:5719672/1‑150CCAGAACTCCCACTGCTGCATGCGGAAGATACGCTTGAGGTCGGCAAATTCGAACAGCCCCAGTGCAGCGGCAATCACCACCGCAGCCAAAGCGCTGTTAGGCAGGTGCTGCATCAGATTGGGCGCTACCAGCAGCAACAGGGTTAC‑‑‑CGC > 2:6773851/1‑150CCAGAACTCCCACTGCTGCATGCGGAAGATACGCTTGAGGTCGGCAAATTCGAACAGCCCCAGTGCAGCGGCAATCACCACCGCAGCCAAAGCGCTGTTAGGCAGGTGCTGCATCAGATTGGGCGCTACCAGCAGCAACAGGGTTAC‑‑‑CGC > 2:1627874/1‑150 CAGAACTCCCACTGCTGCATGCGGAAGATACGCTTGAGGTCGGCAAATTCGAACAGCCCCAGTGCAGCGGCAATCACCACCGCAGCCAAAGCGCTGTTAGGCAGGTGCTGCATCAGATTGGGCGCTACCAGCAGCAACAGGGTTAC‑‑‑CGCC > 1:1086285/1‑150 CAGAACTCCCACTGCTGCATGCGGAAGATACGCTTGAGGTCGGCAAATTCGAACAGCCCCAGTGCAGCGGCAATCACCACCGCAGCCAAAGCGCTGTTAGGCAGGTGCTGCATCAGATTGGGCGCTACCAGCAGCAACAGGGTTAC‑‑‑CGCC > 1:5058325/1‑150 CAGAACTCCCACTGCTGCATGCGGAAGATACGCTTGAGGTCGGCAAATTCGAACAGCCCCAGTGCAGCGGCAATCACCACCGCAGCCAAAGCGCTGTTAGGCAGGTGCTGCATCAGATTGGGCGCTACCAGCAGCAACAGGGTTAC‑‑‑CGCC > 2:5060037/1‑150 CAGAACTCCCACTGCTGCATGCGGAAGATACGCTTGAGGTCGGCAAATTCGAACAGCCCCAGTGCAGCGGCAATCACCACCGCAGCCAAAGCGCTGTTAGGCAGGTGCTGCATCAGATTGGGCGCTACCAGCAGCAACAGGGTTAC‑‑‑CGCC > 2:565268/1‑150 CAGAACTCCCACTGCTGCATGCGGAAGATACGCTTGAGGTCGGCAAATTCGAACAGCCCCAGTGCAGCGGCAATCACCACCGCAGCCAAAGCGCTGTTAGGCAGGTGCTGCATCAGATTGGGCGCTACCAGCAGCAACAGGGTTAC‑‑‑CGCC > 1:2674094/1‑150 AGAACTCCCACTGCTGCATGCGGAAGATACGCTTGAGGTCGGCAAATTCGAACAGCCCCAGTGCAGCGGCAATCACCACCGCAGCCAAAGCGCTGTTAGGCAGGTGCTGCATCAGATTGGGCGCTACCAGCAGCAACAGGGTTAC‑‑‑CGCCA < 1:373093/150‑1 AGAACTCCCACTGCTGCATGCGGAAGATACGCTTGAGGTCGGCAAATTCGAACAGCCCCAGTGCAGCGGCAATCACCACCGCAGCCAAAGCGCTGTTAGGCAGGTGCTGCATCAGATTGGGCGCTACCAGCAGCAACAGGGTTAC‑‑‑CGCCA > 2:1917887/1‑150 AGAACTCCCACTGCTGCATGCGGAAGATACGCTTGAGGTCGGCAAATTCGAACAGCCCCAGTGCAGCGGCAATCACCACCGCAGCCAAAGCGCTGTTAGGCAGGTGCTGCATCAGATTGGGCGCTACCAGCAGCAACAGGGTTAC‑‑‑CGCCA > 2:2965031/1‑150 AGAACTCCCACTGCTGCATGCGGAAGATACGCTTGAGGTCGGCAAATTCGAACAGCCCCAGTGCAGCGGCAATCACCACCGCAGCCAAAGCGCTGTTAGGCAGGTGCTGCATCAGATTGGGCGCTACCAGCAGCAACAGGGTTAC‑‑‑CGCCA > 2:6716834/1‑150 AGAACTCCCACTGCTGCATGCGGAAGATACGCTTGAGGTCGGCAAATTCGAACAGCCCCAGTGCAGCGGCAATCACCACCGCAGCCAAAGCGCTGTTAGGCAGGTGCTGCATCAGATTGGGCGCTACCAGCAGCAACAGGGTTAC‑‑‑CGCCA < 1:5434425/150‑1 GAACTCCCACTGCTGCATGCGGAAGATACGCTTGAGGTCGGCAAATTCGAACAGCCCCAGTGCAGCGGCAATCACCACCGCAGCCAAAGCGCTGTTAGGCAGGTGCTGCATCAGATTGGGCGCTACCAGCAGCAACAGGGTTAC‑‑‑CGCCAG < 1:5383118/150‑1 GAACTCCCACTGCTGCATGCGGAAGATACGCTTGAGGTCGGCAAATTCGAACAGCCCCAGTGCAGCGGCAATCACCACCGCAGCCAAAGCGCTGTTAGGCAGGTGCTGCATCAGATTGGGCGCTACCAGCAGCAACAGGGTTAC‑‑‑CGCCAG > 2:2616985/1‑150 GGTCGGCAAATTCGAACAGCCCCAGTGCAGCGGCAATCACCACCGCAGCCAAAGCGCTGTTAGGCAGGTGCTGCATCAGATTGGGCGCTACCAGCAGCAACAGGGTTAC‑‑‑CGCCAGGGCGCCGATGATGCCGGCTCGCAGACCCAGCTCAC < 2:6507479/150‑1 GGTCGGCAAATTCGAACAGCCCCAGTGCAGCGGCAATCACCACCGCAGCCAAAGCGCTGTTAGGCAGGTGCTGCATCAGATTGGGCGCTACCAGCAGCAACAGGGTTAC‑‑‑CGCCAGGGCGCCGATGATGCCGGCTCGCAGACCCAGCTCAC < 2:6507528/150‑1 TTCGAACAGCCCCAGTGCAGCGGCAATCACCACCGCAGCCAAAGCGCTGTTAGGCAGGTGCTGCATCAGATTGGGTGCTACCAGCAGCAACAGGGTTAC‑‑‑CGCCAGGGCGCCGATGATGCCGGCTCGCAGACCCAGCTCACCGGCATCATC < 1:610935/150‑1 TTCGAACAGCCCCAGTGCAGCGGCAATCACCACCGCAGCCAAAGCGCTGTTAGGCAGGTGCTGCATCAGATTGGGCGCTACCAGCAGCAACAGGGTTAC‑‑‑CGCCAGTG‑GCCGAAGCTGCCGGCTCGCAGACCCAGCTCACCGGCATCATCG < 2:1142007/150‑1 TTCGAACAGCCCCAGTGCAGCGGCAATCACCACCGCAGCCAAAGCGCTGTTAGGCAGGTGCTGCATCAGATTGGGCGCTACCAGCAGCAACAGGGTTAC‑‑‑CGCCAGGGCGCCGAAGCTGCCGGCTCGCAGACCCAGCTCACCGGCATCATC < 1:2131711/150‑1 TCGAACAGCCCCAGTGCAGCGGCAATCACCACCGCAGCCAAAGCGCTGTTAGGCAGGTGCTGCATCAGATTGGGCGCTACCAGCAGCAACAGGGTTAC‑‑‑CGCCAGGGCGCCGAAGCTGCCGGCTCGCATACCCAGCTCACCGGCATCATCG < 1:2709301/150‑1 CGAACAGCCCCAGTGCAGCGGCAATCACCACCGCAGCCAAAGCGCTGTTAGGCAGGTGCTGCATCAGATTGGGCGCTACCAGCAGC‑AGTTCGTCACGCACCCCAGTG‑GCCGAAGCTGCCGGCTCGCAGACCCAGCTCACCGGCATCATCG < 1:5525090/150‑1 GAACAGCCCCAGTGCAGCGGCAATCACCACCGCAGCCAAAGCGCTGTTAGGCAGGTGCTGCATCAGATTGGGCGCTACCAGCAGCAACAGGGTTAC‑‑‑CGCCAGGGCGCCGATGATGCCGGCTCGCAGACCCAGCTCACCGGCATCATCGGC < 1:2002265/150‑1 GAACAGCCCCAGTGCAGCGGCAATCACCACCGCAGCCAAAGCGCTGTTAGGCAGGTGCTGCATCAGATTGGGCGCTACCAGCAGCAACAGGGTTAC‑‑‑CGCCAGGGCGCCGAAGCTGCCGGCTCGCAGACCCAGCTCACCGGCATCATCGGC < 1:674944/150‑1 AGCCCCAGTGCAGCGGCAATCACCACCGCAGCCAAAGCGCTGTTAGGCAGGTGCTGCATCAGATTGGGCGCTACCAGCAGCAACAGGGTTAC‑‑‑CGCCAGTG‑GCCGAAGCTGCCGGCTCGCAGACCCAGCTCACCGGCATCATCGGCGCCCT < 1:4961460/150‑1 GCCCCAGTGCAGCGGCAATCACCACCGCAGCCAAAGCGCTGTTAGGCAGGTGCTGCATCAGATTGGGCGCTACCAGCAGCAACAGGGTTAC‑‑‑CGCCAGTG‑GCCGAAGCTGCCGGCTCGCAGACCCAGCTCACCGGCATCATCGGCGCCCTG < 1:1091971/150‑1 GCCCCAGTGCAGCGGCAATCACCACCGCAGCCAAAGCGCTGTTAGGCAGGTGCTGCATCAGATTGGGCGCTACCAGCAGCAACAGGGTTAC‑‑‑CGCCAGTG‑GCCGAAGCTGCCGGCTCGCAGACCCAGCTCACCGGCATCATCGGCGCCCTG < 1:681308/150‑1 CCCAGTGCAGCGGCAATCACCACCGCAGCCAAAGCGCTGTTAGGCAGGTGCTGCATCAGATTGGGCGCTACCAGCAGCAACAGGGTTAC‑‑‑CGCCAGTG‑GCCGAAGCTGCCGGCTCGCAGACCCAGCTCACCGGCATCATCGGCGCCCTGGC < 1:5495031/150‑1 CACCGCAGCCAAAGCGCTGTTAGGCAGGTGCTGCATCAGATTGGGCGCTACCAGCAGCAACAGGGTTAC‑‑‑CGCCAGTG‑GCCGAAGCTGCCGGCTCGCAGACCCAGCTCACCGGCATCATCGGCGCCCTGGCGGTAACCCTGTTGCTGCTGG < 1:5047704/150‑1 ACCGCAGCCAAAGCGCTGTTAGGCAGGTGCTGCATCAGATTGGGCGCTACCAGCAGC‑AGTTCGTCACGCACCCCAGTG‑GCCGAAGCTGCCGGCTCGCAGACCCAGCTCACCGGCATCATCGGCGCCCTGGCGGTAACCCTGTTGCTGCTG < 2:814149/150‑1 CCAGTG‑GCCGAAGCTGCCGGCTCGCAGACCCAGCTCACCGGCATCATCGGCGCCCTGGCGGTAACCCTGTTGCTGCTGGTAGCGCCCAATCTGATGCAGCACCTGCCTAACAGCGCTTTGGCTGCGGTGGTGATTGCCGCTGCACTGGGG > 1:6152438/1‑150 CCAGTG‑GCCGAAGCTGCCGGCTCGCAGACCCAGCTCACCGGCATCATCGGCGCCCTGGCGGTAACCCTGTTGCTGCTGGTAGCGCCCAATCTGATGCAGCACCTGCCTAACAGCGCTTTGGCTGCGGTGGTGATTGCCGCTGCACTGGGG > 1:6152107/1‑150 CCAGTG‑GCCGAAGCTGCCGGCTCGCAGACCCAGCTCACCGGCATCATCGGCGCCCTGGCGGTAACCCTGTTGCTGCTGGTAGCGCCCAATCTGATGCAGCACCTGCCTAACAGCGCTTTGGCTGCGGTGGTGATTGCCGCTGCACTGGGG < 2:4355257/150‑1 CCAGTG‑GCCGAAGCTGCCGGCTCGCAGACCCAGCTCACCGGCATCATCGGCGCCCTGGCGGTAACCCTGTTGCTGCTGGTAGCGCCCAATCTGATGCAGCACCTGCCTAACAGCGCTTTGGCTGCGGTGGTGATTGCCGCTGCACTGGGG < 1:4584896/150‑1 CCAGTG‑GCCGAAGCTGCCGGCTCGCAGACCCAGCTCACCGGCATCATCGGCGCCCTGGCGGTAACCCTGTTGCTGCTGGTAGCGCCCAATCTGATGCAGCACCTGCCTAACAGCGCTTTGGCTGCGGTGGTGATTGCCGCTGCACTGGGG < 1:2300186/150‑1 CCAGTG‑GCCGAAGCTGCCGGCTCGCAGACCCAGCTCACCGGCATCATCGGCGCCCTGGCGGTAACCCTGTTGCTGCTGGTAGCGCCCAATCTGATGCAGCACCTGCCTAACAGCGCTTTGGCTGCGGTGGTGATTGCCGCTGCACTGGGG < 1:1846217/150‑1 CAGTG‑GCCGAAGCTGCCGGCTCGCAGACCCAGCTCACCGGCATCATCGGCGCCCTGGCGGTAACCCTGTTGCTGCTGGTAGCGCCCAATCTGATGCAGCACCTGCCTAACAGCGCTTTGGCTGCGGTGGTGATTGCCGCTGCACTGGGGC < 2:4281814/150‑1 CAGTG‑GCCGAAGCTGCCGGCTCGCAGACCCAGCTCACCGGCATCATCGGCGCCCTGGCGGTAACCCTGTTGCTGCTGGTAGCGCCCAATCTGATGCAGCACCTGCCTAACAGCGCTTTGGCTGCGGTGGTGATTGCCGCTGCACTGGGGC < 1:4884366/150‑1 CAGTG‑GCCGAAGCTGCCGGCTCGCAGACCCAGCTCACCGGCATCATCGGCGCCCTGGCGGTAACCCTGTTGCTGCTGGTAGCGCCCAATCTGATGCAGCACCTGCCTAACAGCGCTTTGGCTGCGGTGGTGATTGCCGCTGCACTGGGGC > 2:5803733/1‑150 CAGTG‑GCCGAAGCTGCCGGCTCGCAGACCCAGCTCACCGGCATCATCGGCGCCCTGGCGGTAACCCTGTTGCTGCTGGTAGCGCCCAATCTGATGCAGCACCTGCCTAACAGCGCTTTGGCTGCGGTGGTGATTGCCGCTGCACTGGGGC > 1:2265260/1‑150 CAGTG‑GCCGAAGCTGCCGGCTCGCAGACCCAGCTCACCGGCATCATCGGCGCCCTGGCGGTAACCCTGTTGCTGCTGGTAGCGCCCAATCTGATGCAGCACCTGCCTAACAGCGCTTTGGCTGCGGTGGTGATTGCCGCTGCACTGGGGC < 2:6845706/150‑1 GTG‑GCCGAAGCTGCCGGCTCGCAGACCCAGCTCACCGGCATCATCGGCGCCCTGGCGGTAACCCTGTTGCTGCTGGTAGCGCCCAATCTGATGCAGCACCTGCCTAACAGCGCTGTGGATGCGGAGGTGATTGCCGCTGAACTGGGGCTG > 1:2088457/1‑150 CCAGAACTCCCACTGCTGCATGCGGAAGATACGCTTGAGGTCGGCAAATTCGAACAGCCCCAGTGCAGCGGCAATCACCACCGCAGCCAAAGCGCTGTTAGGCAGGTGCTGCATCAGATTGGGCGCTACCAGCAGCAACAGGGTTAC‑‑‑CGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/834912‑835064‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagTG‑GCCGAAGCTGCCGGCTCGCAGACCCAGCTCACCGGCATCATCGGCGCCCTGGCGGTAACCCTGTTGCTGCTGGTAGCGCCCAATCTGATGCAGCACCTGCCTAACAGCGCTTTGGCTGCGGTGGTGATTGCCGCTGCACTGGGGCTG < NC_002947/835114‑834966 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |