| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1424502 = | 162 (0.550) | 14 (0.050) | 4/244 | NT | 6.8% | intergenic (‑36/+101) | PP_1242/PP_1244 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | = 5243643 | 239 (0.920) | coding (158/204 nt) | PP_5701 | hypothetical protein | |||||
GCGGGCACGCCCGCTCCCACAG‑GGTCACCACAGCCGTCACGCACTGCACAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1424586‑1424502‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgcgaagaggccGGCCCTTCCGGCACGTTAACCAGCCTTAGTGCGAAGTTCCTGGGCTCAGCGGACATCTGCACCTGAACCAGCGCCGACTCAAGAAGAGGCCGCAGCGCCTCCAGTTCATGCATCGTGCCATGCCTCAAGGTGCCTTGCGGCAATCGGTC < NC_002947/5243643‑5243495 GCGGGCTCGCCCGCTCCCACAGCGGTCACCACAGTAGTCAAGACTTGCACAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCGGCCCTTCCGGCACGTTAACCAGCCTTAGTGCGAAGTTCCTGGGCTCAGCGGACATCTGCACCT > 1:6451759/1‑150 gctCGCCCGCTCCCACAGCGGTCACCACAGTAGTCAAGACTTGCACAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCGGCCCTTCCGGCACGTTAACCAGCCTTAGTGCGAAGTTCCTGGGCTCAGCGGACATCTGCACCTGAAC > 1:1071554/4‑150 CCGCTCCCACAGCGGTCACCACAGTAGTCAAGACTTGCACAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCGGCCCTTCCGGCACGTTAACCAGCCTTAGTGCGAAGTTCCTGGGCTCAGCGGACATCTGCACCTGAACCAGCGC > 1:1693049/1‑150 CCGCTCCCACAGCGGTCACCACAGTAGTCAAGACTTGCACAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCGGCCCTTCCGGCACGTTAACCAGCCTTAGTGCGAAGTTCCTGGGCTCAGCGGACATCTGCACCTGAACCAGCGC > 2:4374326/1‑150 GCTCCCACAGCGGTCACCACAGTAGTCAAGACTTGCACAGTACCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCCCTTCCGGCACGTTAACCAGCCTTAGTGCGAAGTTCCTGGGCTCAGCGGACATCTGCACCTGAACCAGCGCCG > 1:6329729/1‑150 TCCCACAGCGGTCACCACAGTAGTCAAGACTTGCACAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCGGACCTTCCGGCACGTTAACCAGCCTTAGTGCGAAGTTCCTGGGCTCAGCGGACATCTGCACCTGAACCAGCGCCGAC > 1:689434/1‑150 TCCCACAGCGGTCACCACAGTAGTCAAGACTTGCACAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCGGACCTTCCGGCACGTTAACCAGCCTTAGTGCGAAGTTCCTGGGCTCAGCGGACATCTGCACCTGAACCAGCGCCGAC > 1:2274785/1‑150 TCCCACAGCGGTCACCACAGTAGTCAAGACTTGCACAGTACCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCCCTTCCGGCACGTTAACCAGCCTTAGTGCGAAGTTCCTGGGCTCAGCGGACATCTGCACCTGAACCAGCGCCGAC > 2:5091164/1‑150 tcttcGCGGGCTCGCCCGCGAAGAGGCCGGCCCTTCCGGCACGTTAACCAGCCTTAGTGCGAAGTTCCTGGGCTCAGCGGACATCTGCACCTGAACCAGCGCCGACTCAAGAAGAGGCCGCAGCGCCTCCAGTTCATGCATCGTGCCATG > 1:6504976/6‑150 cttcGCGGGCTCGCCCGCGAAGAGGCCGGCCCTTCCGGCACGTTAACCAGCCTTAGTGCGAAGTTCCTGGGCTCAGCGGACATCTGCACCTGAACCAGCGCCGACTCAAGAAGAGGCCGCAGCGCCTCCAGTTCATGCATCGTGCCATGC > 2:2793703/5‑150 ttcGCGGGCTCGCCCGCGAAGAGGCCGGCCCTTCCGGCACGTTAACCAGCCTTAGTGCGAAGTTCCTGGGCTCAGCGGACATCTGCACCTGAACCAGCGCCGACTCAAGAAGAGGCCGCAGCGCCTCCAGTTCATGCATCGTGCCATGCC > 1:2669819/4‑150 ttcGCGGGCTCGCCCGCGAAGAGGCCGGCCCTTCCGGCACGTTAACCAGCCTTAGTGCGAAGTTCCTGGGCTCAGCGGACATCTGCACCTGAACCAGCGCCGACTCAAGAAGAGGCCGCAGCGCCTCCAGTTCATGCATCGTGCCATGCC > 2:3801588/4‑150 ttcGCGGGCTCGCCCGCGAAGAGGCCGGCCCTTCCGGCACGTTAACCAGCCTTAGTGCGAAGTTCCTGGGCTCAGCGGACATCTGCACCTGAACCAGCGCCGACTCAAGAAGAGGCCGCAGCGCCTCCAGTTCATGCATCGTGCCATGCC > 1:3851732/4‑150 ttcGCGGGCTCGCCCGCGAAGAGGCCGGCCCTTCCGGCACGTTAACCAGCCTTAGTGCGAAGTTCCTGGGCTCAGCGGACATCTGCACCTGAACCAGCGCCGACTCAAGAAGAGGCCGCAGCGCCTCCAGTTCATGCATCGTGCCATGCC > 2:1032481/4‑150 gcGCCCGCGAAGAGGCCGGCCCTTCCGGCACGTTAACCAGCCTTAGTGCGAAGTTCCTGGGCTCAGCGGACATCTGCACCTGAACCAGCGCCGACTCAAGAAGAGGCCGCAGCGCCTCCAGTTCATGCATCGTGCCATGCCTCAAGGTGC < 1:194118/148‑1 GCCCGCGAAGAGGCCGGCCCTTCCGGCACGTTAACCAGCCTTAGTGCGAAGTTCCTGGGCTCAGCGGACATCTGCACCTGAACCAGCGCCGACTCAAGAAGAGGCCGCAGCGCCTCCAGTTCATGCATCGTGCCATGCCTCAAGGTGCCT > 2:6638899/1‑150 CCCGCGAAGAGGCCGGCCCTTCCGGCACGTTAACCAGCCTTAGTGCGAAGTTCCTGGGCTCAGCGGACATCTGCACCTGAACCAGCGCCGACTCAAGAAGAGGCCGCAGCGCCTCCAGTTCATGCATCGTGCCATGCCTCAAGGTGCCTT > 2:844612/1‑150 CCGCGAAGAGGCCGGCCCTTCCGGCACGTTAACCAGCCTTAGTGCGAAGTTCCTGGGCTCAGCGGACATCTGCACCTGAACCAGCGCCGACTCAAGAAGAGGCCGCAGCGCCTCCAGTTCATGCATCGTGCCATGCCTCAAGGTGCCTTG > 1:494726/1‑150 CCGCGAAGAGGCCGGCCCTTCCGGCACGTTAACCAGCCTTAGTGCGAAGTTCCTGGGCTCAGCGGACATCTGCACCTGAACCAGCGCCGACTCAAGAAGAGGCCGCAGCGCCTCCAGTTCATGCATCGTGCCATGCCTCAAGGTGCCTTG > 1:494571/1‑150 CCGCGAAGAGGCCGGCCCTTCCGGCACGTTAACCAGCCTTAGTGCGAAGTTCCTGGGCTCAGCGGACATCTGCACCTGAACCAGCGCCGACTCAAGAAGAGGCCGCAGCGCCTCCAGTTCATGCATCGTGCCATGCCTCAAGGTGCCTTG > 2:4227675/1‑150 CCGCGAAGAGGCCGGCCCTTCCGGCACGTTAACCAGCCTTAGTGCGAAGTTCCTGGGCTCAGCGGACATCTGCACCTGAACCAGCGCCGACTCAAGAAGAGGCCGCAGCGCCTCCAGTTCATGCATCGTGCCATGCCTCAAGGTGCCTTG > 1:3103393/1‑150 CCGCGAAGAGGCCGGCCCTTCCGGCACGTTAACCAGCCTTAGTGCGAAGTTCCTGGGCTCAGCGGACATCTGCACCTGAACCAGCGCCGACTCAAGAAGAGGCCGCAGCGCCTCCAGTTCATGCATCGTGCCATGCCTCAAGGTGCCTTG > 2:3447938/1‑150 GCGAAGAGGCCGGCCCTTCCGGCACGTTAACCAGCCTTAGTGCGAAGTTCCTGGGCTCAGCGGACATCTGCACCTGAACCAGCGCCGACTCAAGAAGAGGCCGCAGCGCCTCCAGTTCATGCATCGTGCCATGCCTCAAGGTGCCTTGCG < 2:5391463/150‑1 GCGAAGAGGCCGGCCCTTCCGGCACGTTAACCAGCCTTAGTGCGAAGTTCCTGGGCTCAGCGGACATCTGCACCTGAACCAGCGCCGACTCAAGAAGAGGCCGCAGCGCCTCCAGTTCATGCATCGTGCCATGCCTCAAGGTGCCTTGCG < 2:4071594/150‑1 GCGAAGAGGCCGGCCCTTCCGGCACGTTAACCAGCCTTAGTGCGAAGTTCCTGGGCTCAGCGGACATCTGCACCTGAACCAGCGCCGACTCAAGAAGAGGCCGCAGCGCCTCCAGTTCATGCATCGTGCCATGCCTCAAGGTGCCTTGCG < 2:1369565/150‑1 GCGAAGAGGCCGGCCCTTCCGGCACGTTAACCAGCCTTAGTGCGAAGTTCCTGGGCTCAGCGGACATCTGCACCTGAACCAGCGCCGACTCAAGAAGAGGCCGCAGCGCCTCCAGTTCATGCATCGTGCCATGCCTCAAGGTGCCTTGCG < 1:74367/150‑1 GCGAAGAGGCCGGCCCTTCCGGCACGTTAACCAGCCTTAGTGCGAAGTTCCTGGGCTCAGCGGACATCTGCACCTGAACCAGCGCCGACTCAAGAAGAGGCCGCAGCGCCTCCAGTTCATGCATCGTGCCATGCCTCAAGGTGCCTTGCG < 1:3891564/150‑1 GCGAAGAGGCCGGCCCTTCCGGCACGTTAACCAGCCTTAGTGCGAAGTTCCTGGGCTCAGCGGACATCTGCACCTGAACCAGCGCCGACTCAAGAAGAGGCCGCAGCGCCTCCAGTTCATGCATCGTGCCATGCCTCAAGGTGCCTTGCG < 1:4206169/150‑1 GAAGAGGCCGGCCCTTCCGGCACGTTAACCAGCCTTAGTGCGAAGTTCCTGGGCTCAGCGGACATCTGCACCTGAACCAGCGCCGACTCAAGAAGAGGCCGCAGCGCCTCCAGTTCATGCATCGTGCCATGCCTCAAGGTGCCTTGCGGC > 2:741926/1‑150 GAAGAGGCCGGCCCTTCCGGCACGTTAACCAGCCTTAGTGCGAAGTTCCTGGGCTCAGCGGACATCTGCACCTGAACCAGCGCCGACTCAAGAAGAGGCCGCAGCGCCTCCAGTTCATGCATCGTGCCATGCCTCAAGGTGCCTTGCGGC > 1:1801872/1‑150 GAGGCCGGCCCTTCCGGCACGTTAACCAGCCTTAGTGCGAAGTTCCTGGGCTCAGCGGACATCTGCACCTGAACCAGCGCCGACTCAAGAAGAGGCCGCAGCGCCTCCAGTTCATGCATCGTGCCATGCCTCAAGGTGCCTTGCGGCAAT < 1:6261650/150‑1 AGGCCGGCCCTTCCGGCACGTTAACCAGCCTTAGTGCGAAGTTCCTGGGCTCAGCGGACATCTGCACCTGAACCAGCGCCGACTCAAGAAGAGGCCGCAGCGCCTCCAGTTCATGCATCGTGCCATGCCTCAAGGTGCCTTGCGGCAATC > 1:2001726/1‑150 GGCCGGCCCTTCCGGCACGTTAACCAGCCTTAGTGCGAAGTTCCTGGGCTCAGCGGACATCTGCACCTGAACCAGCGCCGACTCAAGAAGAGGCCGCAGCGCCTCCAGTTCATGCATCGTGCCATGCCTCAAGGTGCCTTGCGGCAATCG < 2:6451759/150‑1 GCCGGCCCTTCCGGCACGTTAACCAGCCTTAGTGCGAAGTTCCTGGGCTCAGCGGACATCTGCACCTGAACCAGCGCCGACTCAAGAAGAGGCCGCAGCGCCTCCAGTTCATGCATCGTGCCATGCCTCAAGGTGCCTTGCGGCAATCGG > 1:3878615/1‑150 GCCGGCCCTTCCGGCACGTTAACCAGCCTTAGTGCGAAGTTCCTGGGCTCAGCGGACATCTGCACCTGAACCAGCGCCGACTCAAGAAGAGGCCGCAGCGCCTCCAGTTCATGCATCGTGCCATGCCTCAAGGTGCCTTGCGGCAATCGG > 2:1972071/1‑150 GCCGGCCCTTCCGGCACGTTAACCAGCCTTAGTGCGAAGTTCCTGGGCTCAGCGGACATCTGCACCTGAACCAGCGCCGACTCAAGAAGAGGCCGCAGCGCCTCCAGTTCATGCATCGTGCCATGCCTCAAGGTGCCTTGCGGCAATCGG > 2:4386743/1‑150 GCCGGACCTTCCGGCACGTTAACCAGCCTTAGTGCGAAGTTCCTGGGCTCAGCGGACATCTGCACCTGAACCAGCGCCGACTCAAGAAGAGGCCGCAGCGCCTCCAGTTCATGCATCGTGCCATGCCTCAAGGTGCCTTGCGGCAATCGG < 2:689434/150‑1 CCGGCCCTTCCGGCACGTTAACCAGCCTTAGTGCGAAGTTCCTGGGCTCAGCGGACATCTGCACCTGAACCAGCGCCGACTCAAGAAGAGGCCGCAGCGCCTCCAGTTCATGCATCGTGCCATGCCTCAAGGTGCCTTGCGGCAATCGGT < 2:948519/150‑1 CCGGCCCTTCCGGCACGTTAACCAGCCTTAGTGCGAAGTTCCTGGGCTCAGCGGACATCTGCACCTGAACCAGCGCCGACTCAAGAAGAGGCCGCAGCGCCTCCAGTTCATGCATCGTGCCATGCCTCAAGGTGCCTTGCGGCAATCGGT > 1:5169792/1‑150 CGGCCCTTCCGGCACGTTAACCAGCCTTAGTGCGAAGTTCCTGGGCTCAGCGGACATCTGCACCTGAACCAGCGCCGACTCAAGAAGAGGCCGCAGCGCCTCCAGTTCATGCATCGTGCCATGCCTCAAGGTGCCTTGCGGCAATCGGTC < 1:857725/150‑1 CGGCCCTTCCGGCACGTTAACCAGCCTTAGTGCGAAGTTCCTGGGCTCAGCGGACATCTGCACCTGAACCAGCGCCGACTCAAGAAGAGGCCGCAGCGCCTCCAGTTCATGCATCGTGCCATGCCTCAAGGTGCCTTGCGGCAATCGGTC < 1:857713/150‑1 CGGCCCTTCCGGCACGTTAACCAGCCTTAGTGCGAAGTTCCTGGGCTCAGCGGACATCTGCACCTGAACCAGCGCCGACTCAAGAAGAGGCCGCAGCGCCTCCAGTTCATGCATCGTGCCATGCCTCAAGGTGCCTTGCGGCAATCGGTC < 1:3447938/150‑1 CGGCCCTTCCGGCACGTTAACCAGCCTTAGTGCGAAGTTCCTGGGCTCAGCGGACATCTGCACCTGAACCAGCGCCGACTCAAGAAGAGGCCGCAGCGCCTCCAGTTCATGCATCGTGCCATGCCTCAAGGTGCCTTGCGGCAATCGGTC < 1:2877287/150‑1 CGGCCCTTCCGGCACGTTAACCAGCCTTAGTGCGAAGTTCCTGGGCTCAGCGGACATCTGCACCTGAACCAGCGCCGACTCAAGAAGAGGCCGCAGCGCCTCCAGTTCATGCATCGTGCCATGCCTCAAGGTGCCTTGCGGCAATCGGTC < 1:238553/150‑1 GCGGGCACGCCCGCTCCCACAG‑GGTCACCACAGCCGTCACGCACTGCACAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1424586‑1424502‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgcgaagaggccGGCCCTTCCGGCACGTTAACCAGCCTTAGTGCGAAGTTCCTGGGCTCAGCGGACATCTGCACCTGAACCAGCGCCGACTCAAGAAGAGGCCGCAGCGCCTCCAGTTCATGCATCGTGCCATGCCTCAAGGTGCCTTGCGGCAATCGGTC < NC_002947/5243643‑5243495 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |