| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4865621 = | 312 (0.980) | 16 (0.050) | 7/262 | NT | 5.0% | coding (423/2331 nt) | ligA | DNA ligase |
| ? | NC_002947 | 4865665 = | 305 (1.000) | coding (379/2331 nt) | ligA | DNA ligase | |||||
GCGTGAGTTCGGCCGTCGCGTGGTAGAAGGCCTCGATCAGCCGGGCGCGGTCGACTACAGCTGCGAACCCAAGCTCGATGGCCTGGCCGTGAGCCTGCTGTACCGCGACGGCCAGCTGGTGCAGGGCGCCACCCGTGGCG‑ACGGCACCA‑CTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4865774‑4865621‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggcCGTCGCGGTACAGCAGGCTCACGGCCAGGCCATCGAGCTTGGGTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATG > NC_002947/4865665‑4865813 GCGTGAGTTCGGCCGTCGCGTGGTAGAAGGCCTCGATCAGCCGGGCGCGGTCGACTACAGCTGCGAACCCAAGCTCGATGGCCTGGCCGTGAGCCTGCTGTACCGCGACGGCCAGCTGGTGCAGGGCGCCACCCGTGGCG‑ACGGCACCA‑C < 2:1064657/150‑1GCGTGAGTTCGGCCGTCGCGTGGTAGAAGGCCTCGATCAGCCGGGCGCGGTCGACTACAGCTGCGAACCCAAGCTCGATGGCCTGGCCGTGAGCCTGCTGTACCGCGACGGCCAGCTGGTGCAGGGCGCCACCCGTGGCG‑ACGGCACCA‑C < 1:7227949/150‑1 CGTGAGTTCGGCCGTCGCGTGGTAGAAGGCCTCGATCAGCCGGGCGCGGTCGACTACAGCTGCGAACCCAAGCTCGATGGCCTGGCCGTGAGCCTGCTGTACCGCGACGGCCAGCTGGTGCAGGGCGCCACCCGTGGCG‑ACGGCACCA‑CT > 2:3643632/1‑150 GTGAGTTCGGCCGTCGCGTGGTAGAAGGCCTCGATCAGCCGGGCGCGGTCGACTACAGCTGCGAACCCAAGCTCGATGGCCTGGCCGTGAGCCTGCTGTACCGCGACGGCCAGCTGGTGCAGGGCGCCACCCGTGGCG‑ACGGCACCA‑CTG < 1:3554030/150‑1 GTGAGTTCGGCCGTCGCGTGGTAGAAGGCCTCGATCAGCCGGGCGCGGTCGACTACAGCTGCGAACCCAAGCTCGATGGCCTGGCCGTGAGCCTGCTGTACCGCGACGGCCAGCTGGTGCAGGGCGCCACCCGTGGCG‑ACGGCACCA‑CTG < 1:3554226/150‑1 TGAGTTCGGCCGTCGCGTGGTAGAAGGCCTCGATCAGCCGGGCGCGGTCGACTACAGCTGCGAACCCAAGCTCGATGGCCTGGCCGTGAGCCTGCTGTACCGCGACGGCCAGCTGGTGCAGGGCGCCACCCGTGGCG‑ACGGCACCA‑CTGG < 1:150046/150‑1 TGAGTTCGGCCGTCGCGTGGTAGAAGGCCTCGATCAGCCGGGCGCGGTCGACTACAGCTGCGAACCCAAGCTCGATGGCCTGGCCGTGAGCCTGCTGTACCGCGACGGCCAGCTGGTGCAGGGCGCCACCCGTGGCG‑ACGGCACCA‑CTGG < 1:473976/150‑1 TGAGTTCGGCCGTCGCGTGGTAGAAGGCCTCGATCAGCCGGGCGCGGTCGACTACAGCTGCGAACCCAAGCTCGATGGCCTGGCCGTGAGCCTGCTGTACCGCGACGGCCAGCTGGTGCAGGGCGCCACCCGTGGCG‑ACGGCACCA‑CTGG < 1:6772246/150‑1 TGAGTTCGGCCGTCGCGTGGTAGAAGGCCTCGATCAGCCGGGCGCGGTCGACTACAGCTGCGAACCCAAGCTCGATGGCCTGGCCGTGAGCCTGCTGTACCGCGACGGCCAGCTGGTGCAGGGCGCCACCCGTGGCG‑ACGGCACCA‑CTGG < 1:6416259/150‑1 GAGTTCGGCCGTCGCGTGGTAGAAGGCCTCGATCAGCCGGGCGCGGTCGACTACAGCTGCGAACCCAAGCTCGATGGCCTGGCCGTGAGCCTGCTGTACCGCGACGGCCAGCTGGTGCAGGGCGCCACCCGTGGCG‑ACGGCACCA‑CTGGC < 2:75062/150‑1 GTCGCGTGGTAGAAGGCCTCGATCAGCCGGGCGCGGTCGACTACAGCTGCGAACCCAAGCTCGATGGCCTGGCCGTGAGCCTGCTGTACCGCGACGGCCAG‑TGGTGC‑CGTCGCCACGGGTGGCGCCCTGCACCAGCTGGCCGTCGCGGTA < 1:618594/150‑1 GCCAGCTGGTGCAGGGCGCCACCCGTGGCG‑ACGGCACCA‑CTGGCCGTCGCGGTACAGCAGGCTCACGGCCAGGCCATCGAGCTTGGGTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTC > 2:249949/1‑150 GCCAGCTGGTGCAGGGCGCCACCCGTGGCG‑ACGGCACCA‑CTGGCCGTCGCGGTACAGCAGGCTCACGGCCAGGCCATCGAGCTTGGGTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTC > 1:6811931/1‑150 GCCAGCTGGTGCAGGGCGCCACCCGTGGCG‑ACGGCACCA‑CTGGCCGTCGCGGTACAGCAGGCTCACGGCCAGGCCATCGAGCTTGGGTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTC > 2:249429/1‑150 GCCAGCTGGTGCAGGGCGCCACCCGTGGCG‑ACGGCACCA‑CTGGCCGTCGCGGTACAGCAGGCTCACGGCCAGGCCATCGAGCTTGGGTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTC > 1:829246/1‑150 CAGCTGGTGCAGGGCGCCACCCGTGGCG‑ACGGCACCAGCTGGCCGTCGCGGTACAGCAGGCTCACGGCCAGGCCATCGAGCTTGGGTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCA > 2:897403/1‑150 CAGCTGGTGCAGGGCGCCACCCGTGGCG‑ACGGCACCAGCTGGCCGTCGCGGTACAGCAGGCTCACGGCCAGGCCATCGAGCTTGGGTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCA > 2:2557353/1‑150 CAGCTGGTGCAGGGCGCCACCCGTGGCG‑ACGGCACCA‑CTGGCCGTCGCGGTACAGCAGGCTCACGGCCAGGCCATCGAGCTTGGGTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCAC > 1:4374307/1‑150 CAGCTGGTGCAGGGCGCCACCCGTGGCG‑ACGGCACCA‑CTGGCCGTCGCGGTACAGCAGGCTCACGGCCAGGCCATCGAGCTTGGGTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCAC > 1:3382298/1‑150 CAGCTGGTGCAGGGCGCCACCCGTGGCG‑ACGGCACCA‑CTGGCCGTCGCGGTACAGCAGGCTCACGGCCAGGCCATCGAGCTTGGGTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCAC > 1:3382297/1‑150 GTGCAGGGCGCCACCCGTGGCG‑ACGGCACCA‑CTGGCCGTCGCGGTACAGCAGGCTCACGGCCAGGCCATCGAGCTTGGGTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCACGCAGGT > 2:546815/1‑150 GTGCAGGGCGCCACCCGTGGCG‑ACGGCACCA‑CTGGCCGTCGCGGTACAGCAGGCTCACGGCCAGGCCATCGAGCTTGGGTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCACGCAGGT > 2:546944/1‑150 CAGGGCGCCACCCGTGGCG‑ACGGCACCA‑CTGGCCGTCGCGGTACAGCAGGCTCACGGCCAGGCCATCGAGCTTGGGTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCACGCAGGTCGG > 2:7262169/1‑150 GCGCCACCCGTGGCG‑ACGGCACCA‑CTGGCCGTCGCGGTACAGCAGGCTCACGGCCAGGCCATCGAGCTTGGGTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCACGCAGGTCGGCTTC < 1:7262169/150‑1 caGTGGCG‑ACGGCACCA‑CTGGCCGTCGAGGTACAGCAGGCTCACGGCCAGGCCATCGAGCTTGGGTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAG > 2:4628795/3‑150 CCGTGGCG‑ACGGCACCAGCTGGCCGTCGCGGTACAGCAGGCTCACGGCCAGGCCATCGAGCTTGGGTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAA > 1:640904/1‑150 CTGGCCGTCGCGGTACAGCAGGCTCACGGCCAGGCCATCGAGCTTGGGTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAG > 1:1383526/1‑150 TGGCCGTCGCGGTACAGCAGGCTCACGGCCAGGCCATCGAGCTTGGGTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGC < 1:822588/150‑1 GCCGTCGCGGTACAGCAGGCTCACGGCCAGGCCATCGAGCTTGGGTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCAg > 2:2415531/1‑149 CCGTCGCGGTACAGCAGGCTCACGGCCAGGCCATCGAGCTTGGGTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATG < 2:1622634/150‑1 GCGTGAGTTCGGCCGTCGCGTGGTAGAAGGCCTCGATCAGCCGGGCGCGGTCGACTACAGCTGCGAACCCAAGCTCGATGGCCTGGCCGTGAGCCTGCTGTACCGCGACGGCCAGCTGGTGCAGGGCGCCACCCGTGGCG‑ACGGCACCA‑CTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4865774‑4865621‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggcCGTCGCGGTACAGCAGGCTCACGGCCAGGCCATCGAGCTTGGGTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATG > NC_002947/4865665‑4865813 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |