New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3528414 | NA (NA) | 16 (0.050) | 11/260 | NT | NA | coding (135/1533 nt) | PP_3114 | transposase |
? | NC_002947 | = 3528442 | NA (NA) | coding (163/1533 nt) | PP_3114 | transposase |
GCTCAAGCAACTGCTTGAGCAGATGATCCACGAGCGCGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGCGCCAGCGCTTGTTCGGGCGCAAGACCGAGCAGACTGGCGATGCGGCGACACCACAGTTGCC > NC_002947/3528321‑3528470 | gcccAAGCAACTGCTTGAGCAGATGATCCACGAGCGCGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGCGCCAGCGCTTGTTCGGGCGCAAGACCGAGCAGACTGGCGATGCGGCGACACCACAGTTGcc > 1:2920211/4‑150 (MQ=1) | GCTCAAGCAACTGCTTGAGCAGATGATCCACGAGCGCGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGCGCCAGCGCTTGTTCGGGCGCAAGACCGAGCAGACTGGCGATGCGGCGACACCACAGTTGCC > NC_002947/3528321‑3528470 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |