Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_002947 1,515,811 (33-bp)2→1 pseudogene (715‑747/1851 nt) PP_1325 ← putative lipoprotein

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_002947 1515769 1515801 33 365 [0] [0] 363 PP_1325 putative lipoprotein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1515802 =0 (0.000)253 (1.330) 123/206 0.0 100% pseudogene (756/1851 nt) PP_1325 putative lipoprotein
?NC_002947 = 1515768 0 (0.000)pseudogene (790/1851 nt) PP_1325 putative lipoprotein

Only 100 of 365 total aligned reads displayed.

CAGCGAGCCGATGCGTGAGCTGTCGAACACCTGTACCGCAGGCGCTGGCTGGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTTGCTGC  >  NC_002947/1515619‑1515916
                                                                                                                                                       |                                                                                                                                                    
cAGCGAGCCGATGCGTGAGCTGTCGAACACCTGTACCGCAGGCGCTGGCTGGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGAt                                                                                                                                                      <  2:3513215/150‑1 (MQ=255)
  gCGAGCCGATGCGTGAGCTGTCGAACACCTGTACCGCAGGCGCTGGCTGGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATct                                                                                                                                                    <  2:354793‑M2/150‑3 (MQ=255)
    gAGCCGCTGCGTGAGCTGTCGAACACCTGTACCGCAGGCGCTGGCTGGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttg                                                                                                                                                  >  1:3923483‑M2/1‑146 (MQ=255)
    gAGCCGATGCGTGAGCTGTCGAACACCTGTACCGCAGGCGCTGGCTGGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttg                                                                                                                                                  >  1:3113211‑M2/1‑146 (MQ=255)
    gAGCCGATGCGTGAGCTGTCGAACACCTGTACCGCAGGCGCTGGCTGGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttg                                                                                                                                                  >  2:2428268‑M2/1‑146 (MQ=255)
     aGCCGATGCGTGAGCTGTCGAACACCTGTACCGCAGGCGCTGGCTGGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttgg                                                                                                                                                 >  2:5664038‑M2/1‑145 (MQ=255)
       ccGATGCGTGAGCTGTCGAACACCTGTACCGCAGGCGCTGGCTGGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtc                                                                                                                                               <  2:4057535‑M2/150‑8 (MQ=255)
         gATGCGTGAGCTGTCGAACACCTGTACCGCAGGCGCTGGCTGGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcag                                                                                                                                             <  2:399956‑M2/150‑10 (MQ=255)
          aTGCGTGAGCTGTCGAACACCTGTACCGCAGGCGCTGGCTGGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagc                                                                                                                                            <  2:5433920‑M2/150‑11 (MQ=255)
             cGTGAGCTGTCGAACACCTGTACCGCAGGCGCTGGCTGGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggc                                                                                                                                         >  2:606196‑M2/1‑137 (MQ=255)
             cGTGAGCTGTCGAACACCTGTACCGCAGGCGCTGGCTGGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggc                                                                                                                                         <  2:1161096‑M2/150‑14 (MQ=255)
                   cTGTCGAACACCTGTACCGCAGGCGCTGGCTGGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctg                                                                                                                                   >  1:4057535‑M2/1‑131 (MQ=255)
                    tGTCGAACACCTGTACCGCAGGCGCTGGCTGGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctgg                                                                                                                                  <  1:4174082‑M2/150‑21 (MQ=255)
                     gTCGAACACCTGTACCGCAGGCGCTGGCTGGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggc                                                                                                                                 <  2:5121900‑M2/150‑22 (MQ=255)
                     gTCGAACACCTGTACCGCAGGCGCTGGCTGGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggc                                                                                                                                 <  2:2390181‑M2/150‑22 (MQ=255)
                     gTCGAACACCTGTACCGCAGGCGCTGGCTGGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttg                                                                                                                                                  >  1:5616580‑M2/1‑129 (MQ=255)
                       cGAACACCTGTACCGCAGGCGCTGGCTGGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggcca                                                                                                                               >  2:1506981‑M2/1‑127 (MQ=255)
                        gAACACCTGTACCGCAGGCGCTGGCTGGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccag                                                                                                                              <  1:4774462‑M2/150‑25 (MQ=255)
                        gAACACCTGTACCGCAGGCGCTGGCTGGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccag                                                                                                                              <  2:3275093‑M2/150‑25 (MQ=255)
                         aaCACCTGTACCGCAGGCGCTGGCTGGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagc                                                                                                                             <  1:964351‑M2/150‑26 (MQ=255)
                            acCTGTACCGCAGGCGCTGGCTGGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctcc                                                                                                                          <  2:257712‑M2/150‑29 (MQ=255)
                              cTGTACCGCAGGCGCTGGCTGGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctcctt                                                                                                                        <  1:2416997‑M2/150‑31 (MQ=255)
                              cTGTACCGCAGGCGCTGGCTGGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctcctt                                                                                                                        >  1:2347355‑M2/1‑120 (MQ=255)
                              cTGTACCGCAGGCGCTGGCTGGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctcctt                                                                                                                        >  1:1322238‑M2/1‑120 (MQ=255)
                              cTGTACCGCAGGCGCTGGCTGGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctcctt                                                                                                                        >  2:671140‑M2/1‑120 (MQ=255)
                               tGTACCGCAGGCGCTGGCTGGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttg                                                                                                                       <  2:781797‑M2/150‑32 (MQ=255)
                                gTACCGCAGGCGCTGGCTGGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttga                                                                                                                      >  1:4536677‑M2/1‑118 (MQ=255)
                                   ccGCAGGCGCTGGCTGGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagct                                                                                                                   <  2:3621116‑M2/150‑36 (MQ=255)
                                   ccGCAGGCGCTGGCTGGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagct                                                                                                                   <  1:2932738‑M2/150‑36 (MQ=255)
                                   ccGCAGGCGCTGGCTGGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagct                                                                                                                   <  1:3863891‑M2/150‑36 (MQ=255)
                                     gCAGGCGCTGGCTGGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttg                                                                                                                 <  2:3360843‑M2/150‑38 (MQ=255)
                                           gctggctgGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagg                                                                                                           >  2:1589482‑M2/1‑107 (MQ=255)
                                             tggctggcCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGTGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggc                                                                                                         <  1:5994605‑M2/150‑46 (MQ=255)
                                               gctggcCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggcca                                                                                                       <  1:3681599‑M2/150‑48 (MQ=255)
                                                 tggcCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagc                                                                                                     <  2:3720060‑M2/150‑50 (MQ=255)
                                                 tggcCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagc                                                                                                     >  2:174206‑M2/1‑101 (MQ=255)
                                                     cGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggca                                                                                                 <  1:2267688‑M2/150‑54 (MQ=255)
                                                     cGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagg                                                                                                           <  1:5331210‑M2/140‑44 (MQ=255)
                                                     cGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctg                                                                                                                                   >  2:1185635‑M2/1‑97 (MQ=255)
                                                      gCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcag                                                                                                <  2:933485‑M2/150‑55 (MQ=255)
                                                       cTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagt                                                                                               >  1:3601269‑M2/1‑95 (MQ=255)
                                                           gCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgct                                                                                           >  1:4363178‑M2/1‑91 (MQ=255)
                                                            cTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAACAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctg                                                                                          >  2:5501638‑M2/1‑90 (MQ=255)
                                                             tGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgg                                                                                         <  2:4669248‑M2/150‑62 (MQ=255)
                                                             tGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgg                                                                                         <  2:1359943‑M2/150‑62 (MQ=255)
                                                                gCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcg                                                                                      <  2:1074739‑M2/150‑65 (MQ=255)
                                                                gCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcg                                                                                      <  1:3295386‑M2/150‑65 (MQ=255)
                                                                 ccTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcgg                                                                                     <  2:234825‑M2/150‑66 (MQ=255)
                                                                   tGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggca                                                                                   >  2:2472468‑M2/1‑83 (MQ=255)
                                                                     gAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagg                                                                                 >  2:4953084‑M2/1‑81 (MQ=255)
                                                                      aaGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcaggg                                                                                >  2:591868‑M2/1‑80 (MQ=255)
                                                                         tGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtgg                                                                             <  2:2900348‑M2/150‑74 (MQ=255)
                                                                           ggcggcCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtc                                                                           >  2:3897164‑M2/1‑75 (MQ=255)
                                                                           ggcggcCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagg                                                                                 <  2:84083‑M2/144‑70 (MQ=255)
                                                                            gcggcCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtcc                                                                          <  2:2797331‑M2/150‑77 (MQ=255)
                                                                              ggcCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgg                                                                        <  2:315630‑M2/150‑79 (MQ=255)
                                                                              ggcCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgg                                                                        >  1:1909637‑M2/1‑72 (MQ=255)
                                                                              ggcCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgg                                                                        >  2:2285054‑M2/1‑72 (MQ=255)
                                                                              ggcCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgg                                                                        >  1:5121900‑M2/1‑72 (MQ=255)
                                                                                ccATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggt                                                                      >  1:1567305‑M2/1‑70 (MQ=255)
                                                                                  aTGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgc                                                                    <  1:4894419‑M2/150‑83 (MQ=255)
                                                                                     aaGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgctgt                                                                 >  1:5808541‑M2/1‑65 (MQ=255)
                                                                                       gCCATCGCGCAGGGCGCGATGGCTTCACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgctgt                                                                 <  1:3507263‑M2/150‑86 (MQ=255)
                                                                                       gCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgctgttt                                                               >  2:5764901‑M2/1‑63 (MQ=255)
                                                                                        ccATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgctgtttg                                                              <  1:801723‑M2/150‑89 (MQ=255)
                                                                                         cATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgctgtttgt                                                             <  2:3014047‑M2/150‑90 (MQ=255)
                                                                                         cATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgctgtttga                                                             >  1:4004635‑M2/1‑61 (MQ=255)
                                                                                          aTCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgctgtttgac                                                            <  1:2902061‑M2/150‑91 (MQ=255)
                                                                                          aTCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgctgtttgac                                                            >  2:3829498‑M2/1‑60 (MQ=255)
                                                                                          aTCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgctgtttgac                                                            <  1:4276879‑M2/150‑91 (MQ=255)
                                                                                          aTCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggca                                                                                                 >  1:1875862‑M2/1‑60 (MQ=255)
                                                                                          aTCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggca                                                                                                 <  2:1875862‑M2/113‑54 (MQ=255)
                                                                                           tCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgctgtttgacc                                                           <  1:3781488‑M2/150‑92 (MQ=255)
                                                                                               gcAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgctgtttgacccagg                                                       >  1:5498264‑M2/1‑55 (MQ=255)
                                                                                                    gcgcG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgctgtttgacccaggcttcg                                                  <  1:1059944‑M2/150‑101 (MQ=255)
                                                                                                     cgcg‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgctgtttgacccaggcttcga                                                 <  1:1715645‑M2/150‑102 (MQ=255)
                                                                                                      gcg‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgctgtttgacccaggcttcgat                                                >  2:4774462‑M2/1‑48 (MQ=255)
                                                                                                                cacCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgctgtttgacccaggcttcgatggccgctt                                        <  1:2683363‑M2/150‑111 (MQ=255)
                                                                                                                cacCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgctgtttgacccaggcttcgatggccgctt                                        <  1:4943819‑M2/150‑111 (MQ=255)
                                                                                                                 acCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgctgtttgacccaggcttcgatggccgcttg                                       <  2:421368‑M2/150‑112 (MQ=255)
                                                                                                                 acCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgctgtttgacccaggcttcgatggccgctt                                        >  1:1094843‑M2/1‑39 (MQ=255)
                                                                                                                  ccGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgctgtttgacccaggcttcgatggccgcttgc                                      >  2:655033‑M2/1‑38 (MQ=255)
                                                                                                                   cGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgctgtttgacccaggcttcgatggccgcttgct                                     <  1:1459396‑M2/150‑114 (MQ=255)
                                                                                                                    ggCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgctgtttgacccaggcttcgatggccgcttgctg                                    <  1:2805913‑M2/150‑115 (MQ=255)
                                                                                                                     gCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgctgtttgacccaggcttcgatggccgcttgctgc                                   >  2:2970057‑M2/1‑35 (MQ=255)
                                                                                                                      ccAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgctgtttgacccaggcttcgatggccgcttgctgct                                  >  1:4722544‑M2/1‑34 (MQ=255)
                                                                                                                       cAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgctgtttgacccaggcttcgatggccgcttgctgctg                                 <  2:5197947‑M2/150‑118 (MQ=255)
                                                                                                                        aGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgctgtttgacccaggcttc                                                   >  2:2018146‑M2/1‑32 (MQ=255)
                                                                                                                              ccTTCCAGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgctgtttgacccaggcttcgatggccgcttgctgctgctccagg                          >  1:3014047‑M2/1‑26 (MQ=255)
                                                                                                                                ttCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgctgtttgacccaggcttcgatggccgcttgctgctgctccagggt                        >  1:1049249‑M2/1‑24 (MQ=255)
                                                                                                                                  ccTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgctgtttgacccaggcttcgatggccgcttgctgctgctccagggtgc                      >  2:5344821‑M2/1‑22 (MQ=255)
                                                                                                                                    tGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgctgtttgacccaggcttcgatggccgcttgctgctgctccagggtgccg                    <  2:5871308‑M2/150‑131 (MQ=255)
                                                                                                                                         cagcagcagGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgctgtttgacccaggcttcgatggccgcttgctgctgctccagggtgccggcgct               <  2:5168197‑M2/150‑136 (MQ=255)
                                                                                                                                          agcagcagGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgctgtttgacccaggcttcgatggccgcttgctgctgctccagggtgccggcgctt              >  1:4213383‑M2/1‑14 (MQ=255)
                                                                                                                                          agcagcagGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgctgtttgaccc                                                          >  1:579041‑M2/1‑14 (MQ=255)
                                                                                                                                            cagcagGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgctgtttgacccaggcttcgatggccgcttgctgctgctccagggtgccggcgctttt            >  1:2031925‑M2/1‑12 (MQ=255)
                                                                                                                                             agcagGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgctgtttgacccaggcttcgatggccgcttgctgctgctccagggtgccggcgcttttc           <  1:1242562‑M2/150‑140 (MQ=255)
                                                                                                                                                agGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgctgtttgacccaggcttcgatggccgcttgctgctgctccagggtgccggcgcttttcacg        <  2:4475234‑M2/150‑143 (MQ=255)
                                                                                                                                                 gggCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgctgtttgacccaggcttcgatggccgcttgctgctgctccagggtgccggcgcttttcacgg       >  2:4332051‑M2/1‑7 (MQ=255)
                                                                                                                                                      aTcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgctgtttgacccaggcttcgatggccgcttgctgctgctccagggtgccggcgcttttcacggcgaag  >  2:2142403‑M2/1‑2 (MQ=255)
                                                                                                                                                       |                                                                                                                                                    
CAGCGAGCCGATGCGTGAGCTGTCGAACACCTGTACCGCAGGCGCTGGCTGGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCG‑‑GGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTTGCTGC  >  NC_002947/1515619‑1515916

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑