| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_002947 | 1,515,811 | (33-bp)2→1 | pseudogene (715‑747/1851 nt) | PP_1325 ← | putative lipoprotein |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_002947 | 1515769 | 1515801 | 33 | 24 [0] | [1] 25 | PP_1325 | putative lipoprotein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1515802 = | 1 (0.060) | 16 (1.470) | 13/180 | 0.1 | 97.9% | pseudogene (756/1851 nt) | PP_1325 | putative lipoprotein |
| ? | NC_002947 | = 1515768 | 0 (0.000) | pseudogene (790/1851 nt) | PP_1325 | putative lipoprotein | |||||
GACCCTGGCTGGCTGGACCAGCCTGGCCTTCGCCGTGAAAAGCGCCGGCACCCTGGAGCAGCAGCAAGCGGCCATCGAAGCCTGGGTCAAACAGCACCCGGACCACCCTGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGAGCTGGCCAGCCAGCCGCTGACCAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1515976‑1515802‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgaccaagctcaaggagctggccagccagccgctgaccaagATCGCCCTGCTGCTGCCTCAGGAAGGCCCGCTGGCCGGTGTAGCCCGCGCCCTGCGCGATGGCTTCATGGCCGCCCACTTCCAGGCCCAGCAAAGCGGCCAGCCAGCGCCTGCGGTACAGGTGTT < NC_002947/1515768‑1515644 GACCCTGGCTGGCTGGACCAGCCTGGCCTTCGCCGTGAAAAGCGCCGGCACCCTGGAGCAGCAGCAAGCGGCCATCGAAGCCTGGGTCAAACAGCACCCGGACCACCCTGCCGCCCAGCAACTGCCGCTGGCCCTG < 1:83891/136‑1 CTGGCTGGCTGGACCAGCCTGGCCTTCGCCGTGAAAAGCGCCGGCACCCTGGAGCAGCAGCAAGCGGCCATCGAAGCCTGGGTCAAACAGCACCCGGACCACCCTGCCGCCCAGCAACTGCCGCTGGCCCTGACCA > 1:374369/1‑136 CGTGAAAAGCGCCGGCACCCTGGAGCAGCAGCAAGCGGCCATCGAAGCCTGGGTCAAACAGCACCCGGACCACCCTGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGAGCTGGCCAGCCAGCCGCTG > 2:413907/1‑136 CGTGAAAAGCGCCGGCACCCTGGAGCAGCAGCAAGCGGCCATCGAAGCCTGGGTCAAACAGCACCCGGACCACCCTGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGAGCTGGCCAGCCAGCCGCTG > 1:64295/1‑136 GTGAAAAGCGCCGGCACCCTGGAGCAGCAGCAAGCGGCCATCGAAGCCTGGGTCAAACAGCACCCGGACCACCCTGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGAGCTGGCCAGCCAGCCGCTGA > 1:371795/1‑136 AAAGCGCCGGCACCCTGGAGCAGCAGCAAGCGGCCATCGAAGCCTGGGTCAAACAGCACCCGGACCACCCTGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGAGCTGGCCAGCCAGCCGCTGACCAA > 2:27063/1‑136 CGCCGGCACCCTGGAGCAGCAGCAAGCGGCCATCGAAGCCTGGGTCAAACAGCACCCGGACCACCCTGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGAGCTGGCCAGCCAGCCGCTGACCAAGATC < 2:101017/136‑1 CACCCTGGAGCAGCAGCAAGCGGCCATCGAAGCCTGGGTCAAACAGCACCCGGACCACCCTGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGAGCTGGCCAGCCAGCCGCTGACCAAGATCGCCCTG < 1:217836/136‑1 CACCCTGGAGCAGCAGCAAGCGGCCATCGAAGCCTGGGTCAAACAGCACCCGGACCACCCTGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGAGCTGGCCAGCCAGCCGCTGACCAAGATCGCCCTG < 2:404899/136‑1 GAGCAGCAGCAAGCGGCCATCGAAGCCTGGGTCAAACAGCACCCGGACCACCCTGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGAGCTGGCCAGCCAGCCGCTGACCAAGATCGCCCTGCTGCTGC > 1:357654/1‑136 AGCAGCAAGCGGCCATCGAAGCCTGGGTCAAACAGCACCCGGACCACCCTGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGAGCTGGCCAGCCAGCCGCTGACCAAGATCGCCCTGCTGCTCCCTCA > 2:273309/1‑136 CAGCAAGCGGCCATCGAAGCCTGGGTCAAACAGCACCCGGACCACCCTGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGAGCTGGCCAGCCAGCCGCTGACCAAGATCGCCCTGCTGCTGCCTCAGG < 2:389878/136‑1 CAGCAAGCGGCCATCGAAGCCTGGGTCAAACAGCACCCGGACCACCCTGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGAGCTGGCCAGCCAGCCGCTGACCAAGATCGCCCTGCTGCTGCCTCAGG < 2:374369/136‑1 CAAGCGGCCATCGAAGCCTGGGTCAAACAGCACACGGACCACCCTGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGAGCTGGCCAGCCCGCCGCTGACCAAGATCGCCCAGCAGCTGCCTCAGGAAG > 2:33231/1‑136 CCATCGAAGCCTGGGTCAAACAGCACCCGGACCACCCTGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGAGCTGGCCAGCCAGCCGCTGACCAAGATCGCCCTGCTGCTGCCTCAGGAAGGCCCGCT < 1:305239/136‑1 AAGCCTGGGTCAAACAGCACCCGGACCACCCTGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGAGCTGGCCAGTCAGCCGCTGACCAAGATCGCCCTGCTGCTGCCTCAGGAAGGCCCGCTGGCCGG < 2:102858/136‑1 AAGCCTGGGGCAAACAGCACCCGGACCACCCTGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGAGCTGGCCAGCCAGCCGCTGACCAAGATCGCCCTGCTGCTGCCTCAGGAAGGCCCGCTGGCCGG < 2:393220/136‑1 GGTCAAACAGCACCCGGACCACCCTGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGAGCTGGCCAGCCAGCCGCTGACCAAGATCGCCCTGCTGCTGCCTCAGGAAGGCCCGCTGGCCGGTGTAGCC > 1:262613/1‑136 CAAACAGCACCCGGACCACCCTGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGAGCTGGCCAGCCAGCCGCTGACCAAGATCGCCCTGCTGCTGCCTCAGGAAGGCCCGCTGGCCGGTGTAGCCCGC < 1:413907/136‑1 ACCCGGACCACCCTGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGAGCTGGCCAGCCAGCCGCTGACCAAGATCGCCCTGCTGCTGCCTCAGGAAGGCCCGCTGGCCGGTGTAGCCCGCGCCCTGCG < 2:104708/136‑1 CACCCTGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGAGCTGGCCAGCCAGCCGCTGACCAAGATCGCCCTGCTGCTGCCTCAGGAAGGCCCGCTGGCCGGTGTAGCCCGCGCCCTGCGCGATGGCT < 2:64295/136‑1 TGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGAGCTGGCCAGCCAGCCGCTGACCAAGATCGCCCTGCTGCTGCCTCAGGAAGGCCCGCTGGCCGGAGTAGCCCGCCCCCTGCGCGATGGCTTCATt > 1:53544/1‑135 CCAAGCTCAAGGAGCTGGCCAGCCAGCCGCTGACCAAGATCGCCCTGCTGCTGCCTCAGGAAGGCCCGCTGGCCGGTGTAGCCCGCGCCCTGCGCGATGGCTTCATGGCCGCCCACTTCCAGGCCCAGCAAAGCGG > 2:383592/1‑136 cCAAGGAGCTGGCCAGCCAGCCGCTGACCAAGATCGCCCTGCTGCTGCCTCAGGAAGGCCCGCTGGCCGGTGTAGCCCGCGCCCTGCGCGATGGCTTCATGGCCGCCCACTTCCAGGCCCAGCAAAGCGGCCAGCC < 1:156666/135‑1 GAGCTGGCCAGCCAGCCGCTGACCAAGATCGCCCTGCTGCTGCCTCAGGAAGGCCCGCTGGCCGGTGTAGCCCGCGCCCTGCGCGATGGCTTCATGGCCGCCCACTTCCAGGCCCAGCAAAGCGGCCAGCCAGCGC < 2:89328/136‑1 GCCAGCCAGCCGCTGACCAAGATCGCCGTGCTGCTGCCTGAGGAAGGCCCGCTGGGCGGTGTAGCCCGCGCGGTGCGCGATGGCTTCATGGCCGCCCACTTCCAGGCCCAGCAAAGCGGCCAGCCAGCGCCTGCGG < 2:220849/136‑1 GCCAGCCAGCCGCTGACCAAGATCGCCCTGCTGCTGGCTCAGGTAGGCCCGCTGGCCGGTGTAGCCCGCGCCCTGCGCGATGGCTTCATGGCCGCCCACTTCCAGGCCCAGCATAGCGGCCAGCCAGCGCCTGCGG < 2:294918/136‑1 GCCAGCCAGCCGCTGACCAAGATCGCCCTGCTGCTGCCTCAGGAAGGCCCGCTGGCCGGTGTAGCCCGCGCCCTGCGCGATGGCTTCATGGCCGCCCACTTCCAGGCCCAGCAAAGCGGCCAGCCAGCGCCTGCGG < 2:256082/136‑1 GCCAGCCAGCCGCTGACCAAGATCGCCCTGCTGCTGCCTCAGGAAGGCCCGCTGGCCGGTGTAGCCCGCGCCCTGCGCGATGGCTTCATGGCCGCCCACTTCCAGGCCCAGCAAAGCGGCCAGCCAGCGCCTGCGG > 1:193416/1‑136 CGCTGACCAAGATCGCCCTGCTGCTGCCTCAGGAAGGCCCGCTGGCCGGTGTAGCCCGCGCCCTGCGCGATGGCTTCATGGCCGCCCACTTCCAGGCCCAGCAAAGCGGCCAGCCAGCGCCTGCGGTACAGGTGTT < 2:262613/136‑1 GACCCTGGCTGGCTGGACCAGCCTGGCCTTCGCCGTGAAAAGCGCCGGCACCCTGGAGCAGCAGCAAGCGGCCATCGAAGCCTGGGTCAAACAGCACCCGGACCACCCTGCCGCCCAGCAACTGCCGCTGGCCCTGACCAAGCTCAAGGAGCTGGCCAGCCAGCCGCTGACCAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1515976‑1515802‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgaccaagctcaaggagctggccagccagccgctgaccaagATCGCCCTGCTGCTGCCTCAGGAAGGCCCGCTGGCCGGTGTAGCCCGCGCCCTGCGCGATGGCTTCATGGCCGCCCACTTCCAGGCCCAGCAAAGCGGCCAGCCAGCGCCTGCGGTACAGGTGTT < NC_002947/1515768‑1515644 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |