New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 744925 = | NA (NA) | 8 (0.860) | 6/262 | 0.3 | 100% | intergenic (‑587/+44) | PP_0636/PP_0637 | cold shock DNA‑binding domain‑containing protein/transposase |
? | NC_002947 | 1015813 = | 0 (0.000) | intergenic (‑40/‑728) | SBRG_Ecoli_galE/prfC | SBRG_Ecoli_galE/peptide chain release factor 3 |
GATCAGATGAACAGCCTCCAAATCGATATGGCGAAATTTAAGGAAGCTGTCGCAGCTAACATGGCTTAGAAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAG > NC_002947/744853‑745017 | gatCAGATGAACAGCCTCCAAATCGATATGGCGAAATTTAAGGAAGCTGTCGCAGCTAACATGGCTTAGAAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCg < 2:161573/136‑1 (MQ=255) atCAGATGAACAGCCTCCAAATCGATATGGCGAAATTTAAGGAAGCTGTCGCAGCTAACATGGCTTAGAAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGa > 2:229651/1‑136 (MQ=255) cGATATGGCGAAATTTAAGGAAGCTGTCGCAGCTAACATGGCTTAGAAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCt < 2:147157/136‑1 (MQ=255) ggCGAAATTTAAGGAAGCTGTCGCAGCTAACATGGCTTAGAAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAg > 1:66217/1‑136 (MQ=255) | GATCAGATGAACAGCCTCCAAATCGATATGGCGAAATTTAAGGAAGCTGTCGCAGCTAACATGGCTTAGAAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAG > NC_002947/744853‑745017 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |