Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	4986770	4986943	174	2 [1]	[1] 2	flgE	flagellar hook protein FlgE

TTGTTGCCGGTAACGTTCAGGGCCTTGTTTGCTGCATAGAGGCCGCTAAGGCCGATATTGAAAGACATGTGTAACTCCTGTCGTTTTGCTCAGGCCCTAGATGCCGATGCTTTGGATTTTGGAAAGCGCAACACTGCCCAGCCCGGCCAGGTTGAGCGTCATCTCCGAACCGTTGCTACCCATGGTCACACTGGTAACC  >  NC_002947/4986881‑4987079                                                                |                                                                                                                                        ttgttgCCGGTAACGTTCAGGGCCTTGTTTGCTGCATAGAGGCCGCTAAGGCCGATATTGAAAGACATGTGTAACTCCTGTCGTTTTGCTCAGGCCCTAGATGCCGATGCTTTGGATTTTGGAAAGCGCAACACTg                                                                 >  1:245938/1‑136 (MQ=255)                                                                gACATGTGTAACTCCTGTCGTTTTGCTCAGGCCCTAGATGCCGATGCTTTGGATTTTGGAAAGCGCAACACTGCCCAGCCCGGCCAGGTTGAGCGTCATCTCCGAACCGTTGCTACCCATGGTCACACTGGTAAcc  >  2:39586/1‑136 (MQ=255)                                                                |                                                                                                                                        TTGTTGCCGGTAACGTTCAGGGCCTTGTTTGCTGCATAGAGGCCGCTAAGGCCGATATTGAAAGACATGTGTAACTCCTGTCGTTTTGCTCAGGCCCTAGATGCCGATGCTTTGGATTTTGGAAAGCGCAACACTGCCCAGCCCGGCCAGGTTGAGCGTCATCTCCGAACCGTTGCTACCCATGGTCACACTGGTAACC  >  NC_002947/4986881‑4987079

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑