| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 594784 | 167 (0.690) | 12 (0.050) | 9/252 | NT | 6.8% | intergenic (‑20/+107) | PP_0505/PP_0506 | hypothetical protein/ABC transporter permease |
| ? | NC_002947 | = 594847 | 173 (0.780) | intergenic (‑83/+44) | PP_0505/PP_0506 | hypothetical protein/ABC transporter permease | |||||
ATGTCGTGCAGCGGCGCCAGTTGTGGCGGGATGACCGGGGCACCTTCAGGGATCAGTGCGGGCCAGTCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCT‑CTTCGCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/594628‑594784‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcgcgggcaCGCCCGCTCCCACAGGGAGCCCCGCAGGCTTTGGAGCTTGTGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCAATGCACATGCTGCTGGCCTTGCTGTTGCTGGTAGCGATGCCTCTATGGGCCGCCGAACCCAAGGAG < NC_002947/594847‑594699 ATGTCGTGCAGCGGCGCCAGTTGTGGCGGGATGACCGGGGCACCTTCAGGGATCAGTGCGGGCCAGTCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCT‑CTTC < 1:2972301/150‑1 TGTCGTGCAGCGGCGCCAGTTGTGGCGGGATGACCGGGGCACCTTCAGGGATCAGTGCGGGCCAGTCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCT‑CTTCG > 2:1005137/1‑150 GTCGTGCAGCGGCGCCAGTTGTGGCGGGATGACCGGGGCACCTTCAGGGATCAGTGCGGGCCAGTCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCT‑CTTCGC < 1:1515418/150‑1 GTCGTGCAGCGGCGCCAGTTGTGGCGGGATGACCGGGGCACCTTCAGGGATCAGTGCGGGCCAGTCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCT‑CTTCGC < 1:3101185/150‑1 TCGTGCAGCGGCGCCAGTTGTGGCGGGATGACCGGGGCACCTTCAGGGATCAGTGCGGGCCAGTCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCT‑CTTCGCG > 1:21921/1‑150 CGTGCAGCGGCGCCAGTTGTGGCGGGATGACCGGGGCACCTTCAGGGATCAGTGCGGGCCAGTCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCT‑CTTCGCGG < 2:3352035/150‑1 CGTGCAGCGGCGCCAGTTGTGGCGGGATGACCGGGGCACCTTCAGGGATCAGTGCGGGCCAGTCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCT‑CTTCGCGG < 1:2982430/150‑1 CGTGCAGCGGCGCCAGTTGTGGCGGGATGACCGGGGCACCTTCAGGGATCAGTGCGGGCCAGTCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCT‑CTTCGCGG < 2:2441546/150‑1 CGTGCAGCGGCGCCAGTTGTGGCGGGATGACCGGGGCACCTTCAGGGATCAGTGCGGGCCAGTCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCT‑CTTCGCGG < 1:4469369/150‑1 CGTGCAGCGGCGCCAGTTGTGGCGGGATGACCGGGGCACCTTCAGGGATCAGTGCGGGCCAGTCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCT‑CTTCGCGG < 1:4693486/150‑1 GTGCAGCGGCGCCAGTTGTGGCGGGATGACCGGGGCACCTTCAGGGATCAGTGCGGGCCAGTCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCT‑CTTCGCGGG < 2:897102/150‑1 GTGCAGCGGCGCCAGTTGTGGCGGGATGACCGGGGCACCTTCAGGGATCAGTGCGGGCCAGTCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCT‑CTTCGCGGG > 1:1155232/1‑150 GTGCAGCGGCGCCAGTTGTGGCGGGATGACCGGGGCACCTTCAGGGATCAGTGCGGGCCAGTCCAGCTCCTTGGGTTAGGCGGCCCAAAGAGGCATCGCTACCAGCAACAGCAAGGCCCGAAGCATGTGCATTGCCGGCCT‑CTACGCGcg > 1:3350093/1‑148 TGCAGCGGCGCCAGTTGTGGCGGGATGACCGGGGCACCTTCAGGGATCAGTGCGGGCCAGTCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCT‑CTTCGCGGGC > 1:1085124/1‑150 TGCAGCGGCGCCAGTTGTGGCGGGATGACCGGGGCACCTTCAGGGATCAGTGCGGGCCAGTCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCT‑CTTCGCGGGC < 2:5333384/150‑1 TGCAGCGGCGCCAGTTGTGGCGGGATGACCGGGGCACCTTCAGGGATCAGTGCGGGCCAGTCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCT‑CTTCGCGGGC < 2:4708370/150‑1 GCAGCGGCGCCAGTTGTGGCGGGATGACCGGGGCACCTTCAGGGATCAGTGCGGGCCAGTCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCT‑CTTCGCGGGCA > 1:410939/1‑150 AGTGCGGGCCAGTCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCT‑CTTCGCGGGCATGCCCGCTCCCACAGGGAGCCCCGCAGGCTTTGGAGCTTGTGCAGTA < 2:5418274/150‑1 CGGGCCAGTCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTGCTTCGCGGGCACGCCCGCTCCCACAGGGAGCCCCGCAGGCTTTGGAGCTTGTGCAGTACCT < 1:1654788/150‑1 GGGCCAGTCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCT‑CTTCGCGGGCATGCCCGCTCCCACAGGGAGCCCCGCAGGCTTTGGAGCTTGTGCAGTACCTGT < 2:1515454/150‑1 GCCAGTCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCT‑CTTCGCGGGCACGCCCGCTCCCACAGGGAGCCCCGCAGGCTTTGGAGTTTGTGCAGTACCTGTGG < 2:387092/150‑1 GTCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCT‑CTTCGCGGGCACGCCCGCTCCCACAGGGAGCCCCGCAGGCTTTGGAGCTTGTGCAGTACCTGTGGGAGC < 1:1420115/150‑1 GTCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCT‑CTTCGCGGGCACGCCCGCTCCCACAGGGAGCCCCGCAGGCTTTGGAGCTTGTGCAGTACCTGTGGGAGC < 2:2000446/150‑1 TCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTGCTTCGCGGGCACGCCCGCTCCCACAGGGAGCCCCGCAGGCTTTGGAGCTTGTGCAGTACCTGTGGGAGC < 2:1611461/150‑1 CCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCT‑CTTCGCGGGCATGCCCGCTCCCACAGGGAGCCCCGCAGGCTTTGGAGCTTGTGCAGTACCTGTGGGAGCGG < 2:4536343/150‑1 CCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCT‑CTTCGCGGGCACGCCCGCTCCCACAGGGAGCCCCGCAGGCTTTGGAGCTTGTGCAGTACCTGTGGGAGCGG < 1:5444766/150‑1 AGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCT‑CTTCGCGGGCATGCCCGCTCCCACAGGGAGCCCCGCAGGCTTTGGAGCTTGTGCAGTACCTGTGGGAGCGGGC < 1:4898675/150‑1 ATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCT‑CTTCGCGGGCACGCCCGCTCCCACAGGGAGCCCCGCAGGCTTTGGAGCTTGTGCAGTACCTGTGGGAGCGGGCAT < 1:3531138/122‑1 ATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCT‑CTTCGCGGGCACGCCCGCTCCCACAGGGAGCCCCGCAGGCTTTGGAGCTTGTGCAGTACCTGTGGGAGCGGGCAT > 2:3531138/1‑122 CTTCGCGGGCACGCCCGCTCCCACAGGGAGCCCCGCAGGCTTTGGAGCTTGTGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCAATGCACATGCTGCTGGCCTTGCTGTTGCTGGTAGCGATGCCTCTATGGGCCGCCGA < 2:3540490/150‑1 TTCGCGGGCACGCCCGCTCCCACAGGGAGCCCCGCAGGCTTTGGAGCTTGTGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCAATGCACATGCTGCTGGCCTTGCTGTTGCTGGTAGCGATGCCTCTATGGGCCGCCGAA > 2:3870953/1‑150 CGCGGGCACGCCGGCTCCCACAGGGAGCCCCGAAGGATTTGGAGTTTGTGCAGGACCTGTGGGAGCTGGCATGCCGGCGAAGAGGCCGGCAATGCACTTGCTGCTGGCCTTGCTGTTGCTGGTAGCGATGCCTCTATGGGCCGCCGAACC < 1:5000782/150‑1 CGGGCACGCCCGCTCCCCCAGGGAGCCCCGCAGGCTTTGGAGCTTGTGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCAATGCACATGCTGCTGGCCTTGCTGTTGCTGGTAGCGATGCCTCTATGGGCCGCCGAACCCA > 1:4776038/1‑150 GGGCACGCCCGCTCCCACAGGGAGCCCCGCAGGCTTTGGAGCTTGTGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCAATGCACATGCTGCTGGCCTTGCTGTTGCTGGTAGCGATGCCTCTATGGGCCGCCGAACCCAA < 1:1002626/150‑1 GGCACGCCCGCTCCCTCAGGGAGCCCCGCAGGCTTTGGAGCTTGTGCAGTACCTGTGGGAGCGGGCATGCCCGCGTAGAGGCCGGCAATGCACATGCTGCTGGCCTTGCTGTTGCTGGTAGCGATGCCTCTATGGGCCGCCGAACCCAAG < 2:4291354/150‑1 GGCACGCCCGCTCCCACAGGGAGCCCCGCAGGCTTTGGAGCTTGTGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCAATGCACATGCTGCTGGCCTTGCTGTTGCTGGTAGCGATGCCTCTATGGGCCGCCGAACCCAAG > 1:1180209/1‑150 ACGCCCGCTCCCACAGGGAGCCCCGCAGGCTTTGGAGCTTGTGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCAATGCACATGCTGCTGGCCTTGCTGTTGCTGGTAGCGATGCCTCTATGGGCCGCCGAACCCAAGGAG > 2:3786034/1‑150 ACGCCCGCTCCCACAGGGAGCCCCGCAGGCTTTGGAGCTTGTGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCAATGCACATGCTGCTGGCCTTGCTGTTGCTGGTAGCGATGCCTCTATGGGCCGCCGAACCCAAGGAG > 2:3434140/1‑150 ACGCCCGCTCCCACAGGGAGCCCCGCAGGCTTTGGAGCTTGTGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCAATGCACATGCTGCTGGCCTTGCTGTTGCTGGTAGCGATGCCTCTATGGGCCGCCGAACCCAAGGAG > 1:5304266/1‑150 ATGTCGTGCAGCGGCGCCAGTTGTGGCGGGATGACCGGGGCACCTTCAGGGATCAGTGCGGGCCAGTCCAGCTCCTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCT‑CTTCGCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/594628‑594784‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcgcgggcaCGCCCGCTCCCACAGGGAGCCCCGCAGGCTTTGGAGCTTGTGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCAATGCACATGCTGCTGGCCTTGCTGTTGCTGGTAGCGATGCCTCTATGGGCCGCCGAACCCAAGGAG < NC_002947/594847‑594699 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |