| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1416346 = | 238 (0.990) | 19 (0.080) | 11/260 | NT | 7.9% | coding (544/1437 nt) | PP_1232 | hypothetical protein |
| ? | NC_002947 | 1416409 = | 220 (0.960) | coding (481/1437 nt) | PP_1232 | hypothetical protein | |||||
GCACTTGTCGCAACGCCACTTCGCGCGGGGTGTCGAGGCCCAGCAGCGCATGCAGTTGCCGATGATGGCGGCGCTGCTGGCCGGCATCGTGCTGGCCGCAGGTGGTGCCGGCGATGCGGGCATCGGCATGATTGCCGGCACCCAGGCAGCGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1416500‑1416346‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggccaGCACGATGCCGGCCAGCAGCGCCGCCATCATCGGCAACTGCATGCGCTGCTGGGCCTCGACACCCCGCGCGAAGTGGCGTTGCGACAAGTGCGCCAGTTCGTGGGCCAGTACCGAGGCATATTCGCCCTCGGTCTGGGCGTTGAGGAAC > NC_002947/1416409‑1416557 GCACTTGTCGCAACGCCACTTCGCGCGGGGTGTCGAGGCCCAGCAGCGCATGCAGTTGCCGATGATGGCGGCGCTGCTGGCCGGCATCGTGCTGGCCGCAGGTGGTGCCGGCGATGCGGGCATCGGCATGATTGCCGGCACCCAGGCAGC > 2:1642508/1‑150GCACTTGTCGCAACGCCACTTCGCGCGGGGTGTCGAGGCCCAGCAGCGCATGCAGTTGCCGATGATGGCGGCGCTGCTGGCCGGCATCGTGCTGGCCGCAGGTGGTGCCGGCGATGCGGGCATCGGCATGATTGCCGGCACCCAGGCAGC > 1:4864375/1‑150GCACTTGTCGCAACGCCACTTCGCGCGGGGTGTCGAGGCCCAGCAGCGCATGCAGTTGCCGATGATGGCGGCGCTGCTGGCCGGCATCGTGCTGGCCGCAGGTGGTGCCGGCGATGCGGGCATCGGCATGATTGCCGGCACCCAGGCAGC > 1:3124577/1‑150 CACTTGTCGCAACGCCACTTCGCGCGGGGTGTCGAGGCCCAGCAGCGCATGCAGTTGCCGATGATGGCGGCGCTGCTGGCCGGCATCGTGCTGGCCGCAGGTGGTGCCGGCGATGCGGGCATCGGCATGATTGCCGGCACCCAGGCAGtg < 1:426877/150‑3 CACTTGTCGCAACGCCACTTCGCGCGGGGTGTCGAGGCCCAGCAGCGCATGCAGTTGCCGATGATGGCGGCGCTGCTGGCCGGCATCGTGCTGGCCGCAGGTGGTGCCGGCGATGCGGGCATCGGCATGATTGCCGGCACCCAGGCAGCG < 1:5125149/150‑1 ACTTGTCGCAACGCCACTTCGCGCGGGGTGTCGAGGCCCAGCAGCGCATGCAGTTGCCGATGATGGCGGCGCTGCTGGCCGGCATCGTGCTGGCCGCAGGTGGTGCCGGCGATGCGGGCATCGGCATGATTGCCGGCACCCAGGCAGCGG < 2:753765/150‑1 ACTTGTCGCAACGCCACTTCGCGCGGGGTGTCGAGGCCCAGCAGCGCATGCAGTTGCCGATGATGGCGGCGCTGCTGGCCGGCATCGTGCTGGCCGCAGGTGGTGCCGGCGATGCGGGCATCGGCATGATTGCCGGCACCCAGGCAGCGG > 2:3104289/1‑150 CTTGTCGCACCGCCACTTCGCGCGGGGTGTCGAGGCCCAGCAGCGCATGCAGTTGCCGATGATGGCGGCGCTGCTGGCCGGCATCGTGCTGGCCGCAGGTGGTGCCGGCGATGCGGGCATCGGCATGATTGCCGGCACCCAGGCAGCGGC < 1:1045224/150‑1 TGTCGCAACGCCACTTCGCGCGGGGTGTCGAGGCCCGGCAGCGCATGCAGTTGCCGATGATGGCGGCGCTGCTGGCCGGCATCGTGCTGGCCGCAGGTGGTGCCGGCGATGCGGGCATCGGCATGATTGCCGGCACCCAGGCAGCGGCCA < 1:2865892/150‑1 TCGTGCTGGCCGCAGGTGGTGCCGGCGATGCGGGCATCGGCATGATTGCCGGCACCCAGGCAGCGGCCAGCACGATGCCGGCCAGCAGCGCCGCCATCATCGGCAACTGCATGCGCTGCTGGGCCTCGACACCCCGCGCGAAGTGGCGTT > 1:2654200/1‑150 GTGCTGGCCGCAGGTGGTGCCGGCGATGCGGGCATCGGCATGATTGCCGGCACCCAGGCGGGGGCCAGCACGATGCCGGCCAGCGGCGCCGCGATCGTCGGCGGCTGCATGCGCTGCTGGGCCTCGACACCCCGCGCGACGTGGCGTTGC > 2:2398032/1‑150 GTGCTGGCCGCAGGTGGTGCCGGCGATGCGGGCATCGGCATGATTGCCGGCACCCAGGCAGCGGCCAGCACGATGCCGGCCAGCAGCGCCGCCATCATCGGCAACTGCATGCGCTGCTGGGCCTCGACACCCCGCGCGAAGTGGCGTTGC > 2:2397912/1‑150 GTGCTGGCCGCAGGTGGTGCCGGCGATGCGGGCATCGGCATGATTGCCGGCACCCAGACAGCGGCCAGCACGATGCCGGCCAGCAGCGCCGCCATCATCGGCAACTGCATGCGCTGCTGGGCCTCGACACCCCGCGCGAAGTGGCGTTGC > 2:2179859/1‑150 GTGCTGGCCGCAGGTGGTGCCGGCGATGCGGGCATCGGCATGATTGCCGGCACCCAGACAGCGGCCAGCACGATGCCGGCCAGCAGCGCCGCCATCATCGGCAACTGCATGCGCTGCTGGGCCTCGACACCCCGCGCGAAGTGGCGTTGC > 2:2179803/1‑150 GCTGGCCGCAGGTGGTGCCGGCGATGCGGGCATCGGCATGATTGCCGGCACCCAGGCAGCGGCCAGCACGATGCCGGCCAGCAGCGCCGCCATCATCGGCAACTGCATGCGCTGCTGGGCCTCGACACCCCGCGCGAAGTGGCGTTGCGA > 1:4008078/1‑150 GCTGGCCGCAGGTGGTGCCGGCGATGCGGGCATCGGCATGATTGCCGGCACCCAGGCAGCGGCCAGCACGATGCCGGCCAGCAGCGCCGCCATCATCGGCAACTGCATGCGCTGCTGGGCCTCGACACCCCGCGCGAAGTGGCGTTGCGA > 1:4008133/1‑150 CTGGCCGCAGGTGGTGCCGGCGATGCGGGCATCGGCATGATTGCCGGCACCCAGGCAGCGGCCAGCACGATGCCGGCCAGCAGCGCCGCCATCATCGGCAACTGCATGCGCTGCTGGGCCTCGACACCCCGCGCGAAGTGGCGTTGCGAC > 2:3848905/1‑150 TGGCCGCAGGTGGTGCCGGCGATGCGGGCATCGGCATGATTGCCGGCACCCAGGCAGCGGCCAGCACGATGCCGGCCAGCAGCGCCGCCATCATCGGCAACTGCATGCGCTGCTGGGCCTCGACACCCCGCGCGAAGTGGCGTTGCGACA > 2:4800912/1‑150 TGGCCGCAGGTGGTGCCGGCGATGCGGGCATCGGCATGATTGCCGGCACCCAGGCAGCGGCCAGCACGATGCCGGCCAGCAGCGCCGCCATCATCGGCAACTGCATGCGCTGCTGGGCCTCGACACCCCGCGCGAAGTGGCGTTGCGACA > 2:2953678/1‑150 CGCAGGTGGTGCCGGCGATGCGGGCATCGGCATGATTGCCGGCACCC‑‑CCTGCGGCCAGCACGATGCCGGCCAGCAGCGCCGCCATCATCGGCAACTGCATGCGCTGCTGGGCCTC < 2:4021245/115‑1 CGCAGGTGGTGCCGGCGATGCGGGCATCGGCATGATTGCCGGCACCC‑‑CCTGCGGCCAGCACGATGCCGGCCAGCAGCGCCGCCATCATCGGCAACTGCATGCGCTGCTGGGCCTC > 1:4021245/1‑115 TGCCGGCGATGCGGGCATCGGCATGATTGCCGGCA‑CCA‑CCTGCGGCCAGCACGATGCCGGCCAGCAGCGCCGCCATCATCGGCAACTGCATGCGCTGCTGGGCCTCGACACCCCGCGCGAAGTGGCGTTGCGACAAGTGCGCCAGTTCGT > 1:1519302/1‑150 CCGGCGATGCGGGCATCGGCATGATTGCCGGCA‑CCA‑CCTGCGGCCAGCACGATGCCGGCCAGCAGCGCCGCCATCATCGGCAACTGCATGCGCTGCTGGGCCTCGACACCCCGCGCGAAGTGGCGTTGCGACAAGTGCGCCAGTTCGTGG > 1:4385596/1‑150 CCGGCGATGCGGGCATCGGCATGATTGCCGGCA‑CCA‑CCTGCGGCCAGCACGATGCCGGCCAGCAGCGCCGCCATCATCGGCAACTGCATGCGCTGCTGGGCCTCGACACCCCGCGCGAAGTGGCGTTGCGACAAGTGCGCCAGTTCGTGG > 1:1888453/1‑150 CCGGCGATGCGGGCATCGGCATGATTGCCGGCA‑CCA‑CCTGCGGCCAGCACGATGCCGGCCAGCAGCGCCGCCATCATCGGCAACTGCATGCGCTGCTGGGCCTCGACACCCCGCGCGAAGTGGCGTTGCGACAAGTGCGCCAGTTCGTGG > 2:3854056/1‑150 CCGGCGATGCGGGCATCGGCATGATTGCCGGCA‑CCA‑CCTGCGGCCAGCACGATGCCGGCCAGCAGCGCCGCCATCATCGGCAACTGCATGCGCTGCTGGGCCTCGACACCCCGCGCGAAGTGGCGTTGCGACAAGTGCGCCAGTTCGTGG > 2:5577656/1‑150 CGGCGATGCGGGCATCGGCATGATTGCCGGCA‑CCA‑CCTGCGGCCAGCACGATGCCGGCCAGCAGCGCCGCCATCATCGGCAACTGCATGCGCTGCTGGGCCTCGACACCCCGCGCGAAGTGGCGTTGCGACAAGTGCGCCAGTTCGTGGG > 1:2244527/1‑150 CGATGCGGGCATCGGCATGATTGCCGGCACCCAGGCAGCGGCCAGCACGATGCCGGCCAGCAGCGCCGCCATCATCGGCAACTGCATGCGCTGCTGGGCCTCGACACCCCGCGCGAAGTGGCGTTGCGACAAGTGCGCCAGTTCGTGGGC > 1:690854/1‑150 gctgcCGGCCAGCACGATGCCGGCCAGCAGCGCCGCCATCATCGGCAACTGCATGCGCTGCTGGGCCTCGACACCCCGCGCGAAGTGGCGTTGCGACAAGTGCGCCAGTTCGTGGGCCAGTACCGAGGCATATTCGCCCTCGGTCTGGGC > 2:644843/6‑150 GCGGCCAGCACGATGCCGGCCAGCAGCGCCGCCATCATCGGCAACTGCATGCGCTGCTGGGCCTCGACACCCCGCGCGAAGTGGCGTTGCGACAAGTGCGCCAGTTCGTGGGCCAGTACCGAGGCATATTCGCCCTCGGTCTGGGCGTTG < 1:2920922/150‑1 GCGGCCAGCACGATGCCGGCCAGCAGCGCCGCCATCATCGGCAACTGCATGCGCTGCTGGGCCTCGACACCCCGCGCGAAGTGGCGTTGCGACAAGTGCGCCAGTTCGTGGGCCAGTACCGAGGCATATTCGCCCTCGGTCTGGGCGTTG < 1:961930/150‑1 CGGCCAGCACGATGCCGGCCAGCAGCGCCGCCATCATCGGCAACTGCATGCGCTGCTGGGCCTCGACACCCCGCGCGAAGTGGCGTTGCGACAAGTGCGCCAGTTCGTGGGCCAGTACCGAGGCATATTCGCCCTCGGTCTGGGCGTTGA < 2:2206154/150‑1 CGGCCAGCACGATGCCGGCCAGCAGCGCCGCCATCATCGGCAACTGCATGCGCTGCTGGGCCTCGACACCCCGCGCGAAGTGGCGTTGCGACAAGTGCGCCAGTTCGTGGGCCAGTACCGAGGCATATTCGCCCTCGGTCTGGGCGTTGA < 1:1980379/150‑1 CGGCCAGCACGATGCCGGCCAGCAGCGCCGCCATCATCGGCAACTGCATGCGCTGCTGGGCCTCGACACCCCGCGCGAAGTGGCGTTGCGACAAGTGCGCCAGTTCGTGGGCCAGTACCGAGGCATATTCGCCCTCGGTCTGGGCGTTGA < 1:3848905/150‑1 GGCCAGCACGATGCCGGCCAGCAGCGCCGCCATCATCGGCAACTGCATGCGCTGCTGGGCCTCGACACCCCGCGCGAAGTGGCGTTGCGACAAGTGCGCCAGTTCGTGGGCCAGTACCGAGGCATATTCGCCCTCGGTCTGGGCGTTGAG < 2:1916575/150‑1 GGCCAGCACGATGCCGGCCAGCAGCGCCGCCATCATCGGCAACTGCATGCGCTGCTGGGCCTCGACACCCCGCGCGAAGTGGCGTTGCGACAAGTGCGCCAGTTCGTGGGCCAGTACCGAGGCATATTCGCCCTCGGTCTGGGCGTTGAG < 1:467032/150‑1 GCCAGCACGATGCCGGCCAGCAGCGCCGCCATCATCGGCAACTGCATGCGCTGCTGGGCCTCGACACCCCGCGCGAAGTGGCGTTGCGACAAGTGCGCCAGTTCGTGGGCCAGTACCGAGGCATATTCGCCCTCGGTCTGGGCGTTGAGG < 2:354081/150‑1 GCCAGCACGATGCCGGCCAGCAGCGCCGCCATCATCGGCAACTGCATGCGCTGCTGGGCCTCGACACCCCGCGCGAAGTGGCGTTGCGACAAGTGCGCCAGTTCGTGGGCCAGTACCGAGGCATATTCGCCCTCGGTCTGGGCGTTGAGG > 2:5141845/1‑150 CCAGCACGATGCCGGCCAGCAGCGCCGCCATCATCGGCAACTGCATGCGCTGCTGGGCCTCGACACCCCGCGCGAAGTGGCGTTGCGACAAGTGCGCCAGTTCGTGGGCCAGTACCGAGGCATATTCGCCCTCGGTCTGGGCGTTGAGGA > 1:3471897/1‑150 CCAGCACGATGCCGGCCAGCAGCGCCGCCATCATCGGCAACTGCATGCGCTGCTGGGCCTCGACACCCCGCGCGAAGTGGCGTTGCGACAAGTGCGCCAGTTCGTGGGCCAGTACCGAGGCATATTCGCCCTCGGTCTGGGCGTTGAGGA > 1:241386/1‑150 CAGCACGATGCCGGCCAGCAGCGCCGCCATCATCGGCAACTGCATGCGCTGCTGGGCCTCGACACCCCGCGCGAAGTGGCGTTGCGACAAGTGCGCCAGTTCGTGGGCCAGTACCGAGGCATATTCGCCCTCGGTCTGGGCGTTGAGGAA > 2:617239/1‑150 CAGCACGATGCCGGCCAGCAGCGCCGCCATCATCGGCAACTGCATGCGCTGCTGGGCCTCGACACCCCGCGCGAAGTGGCGTTGCGACAAGTGCGCCAGTTCGTGGGCCAGTACCGAGGCATATTCGCCCTCGGTCTGGGCGTTGAGGAA < 2:701859/150‑1 AGCACGATGCCGGCCAGCAGCGCCGCCATCATCGGCAACTGTATGCGCTGCTGGGCCTCGACACCCCGCGCGAAGTGGCGTTGCGACAAGTGCGCCAGTTCGTGGGCCAGTACCGAGGCATATTCGCCCTCGGTCTGGGCGTTGAGGAAC > 1:2515834/1‑150 AGCACGATGCCGGCCAGCAGCGCCGCCATCATCGGCAACTGCATGCGCTGCTGGGCCTCGACACCCCGCGCGAAGTGGCGTTGCGACAAGTGCGCCAGTTCGTGGGCCAGTACCGAGGCATATTCGCCCTCGGTCTGGGCGTTGAGGAAC < 1:4274119/150‑1 AGCACGATGCCGGCCAGCAGCGCCGCCATCATCGGCAACTGCATGCGCTGCTGGGCCTCGACACCCCGCGCGAAGTGGCGTTGCGACAAGTGCGCCAGTTCGTGGGCCAGTACCGAGGCATATTCGCCCTCGGTCTGGGCGTTGAGGAAC > 1:2294994/1‑150 AGCACGATGCCGGCCAGCAGCGCCGCCATCATCGGCAACTGCATGCGCTGCTGGGCCTCGACACCCCGCGCGAAGTGGCGTTGCGACAAGTGCGCCAGTTCGTGGGCCAGTACCGAGGCATATTCGCCCTCGGTCTGGGCGTTGAGGAAC > 1:2687481/1‑150 GCACTTGTCGCAACGCCACTTCGCGCGGGGTGTCGAGGCCCAGCAGCGCATGCAGTTGCCGATGATGGCGGCGCTGCTGGCCGGCATCGTGCTGGCCGCAGGTGGTGCCGGCGATGCGGGCATCGGCATGATTGCCGGCACCCAGGCAGCGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1416500‑1416346‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggccaGCACGATGCCGGCCAGCAGCGCCGCCATCATCGGCAACTGCATGCGCTGCTGGGCCTCGACACCCCGCGCGAAGTGGCGTTGCGACAAGTGCGCCAGTTCGTGGGCCAGTACCGAGGCATATTCGCCCTCGGTCTGGGCGTTGAGGAAC > NC_002947/1416409‑1416557 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |