| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2064575 = | 222 (0.920) | 14 (0.060) | 8/256 | NT | 6.6% | intergenic (+17/+107) | PP_1835/PP_1836 | hypothetical protein/ZIP family metal transporter |
| ? | NC_002947 | 2064656 = | 192 (0.850) | intergenic (+98/+26) | PP_1835/PP_1836 | hypothetical protein/ZIP family metal transporter | |||||
TTGATGGGCGGGTTTGCGGTGATGATGTTTCTCGACACTGCGCTGGGCTGAAGATTGATGTTTCGTGAGCCGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGGTTATCACAGGGCCTGATGCGCTGGAGTACCTGAGGGAGCGGGCATGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2064732‑2064575‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgcgaaGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCAGGGTCGCCGCTGTCTGGTGCCCGTTGCGGTGGGTTTCGGGGATCACCTCGTGGCTGACCACAAAGA > NC_002947/2064656‑2064803 TTGATGGGCGGGTTTGCGGTGATGATGTTTCTCGACACTGCGCTGGGCTGAAGATTGATGTTTCGTGAGCCGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGGTTATCACAGGGCCTGATGCGCTGGAGTACCTGAGGGAGCGGGCATG > 1:1912073/1‑150 GATGGGCGGGTTTGCGGTGATGATGTTTCTCGACACTGCGCTGGGCTGAAGATTGATGTTTCGTGAGCCGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGGTTATCACAGGGCCTGATGCGCTGGAGTACCTGAGGGAGCGGGCATGCC > 2:5439750/1‑150 GATGGGCGGGTTTGCGGTGATGATGTTTCTCGACACTGCGCTGGGCTGAAGATTGATGTTTCGTGAGCCGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGGTTATCACAGGGCCTGATGCGCTGGAGTACCTGAGGGAGCGGGCATGCC > 2:5439667/1‑150 TGGGCGGGTTTGCGGTGATGATGTTTCTCGACACTGCGCTGGGCTGAAGATTGATGTTTCGTGAGCCGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGGTTATCACAGGGCCTGATGCGCTGGAGTACCTGAGGGAGCGGGCATGCCCG < 1:2906304/150‑1 GGGCGGGTTTGCGGTGATGATGTTTCTCGACACTGCGCTGGGCTGAAGATTGATGTTTCGTGAGCCGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGGTTATCACAGGGCCTGATGCGCTGGAGTACCTGAGGGAGCGGGCATGCCCGC < 1:4508218/150‑1 GGGCGGGTTTGCGGTGATGATGTTTCTCGACACTGCGCTGGGCTGAAGATTGATGTTTCGTGAGCCGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGGTTATCACAGGGCCTGATGCGCTGGAGTACCTGAGGGAGCGGGCATGCCCGC > 2:4018523/1‑150 GGGCGGGTTTGCGGTGATGATGTTTCTCGACACTGCGCTGGGCTGAAGATTGATGTTTCGTGAGCCGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGGTTATCACAGGGCCTGATGCGCTGGAGTACCTGAGGGAGCGGGCATGCCCGC > 1:2949035/1‑150 GGGCGGGTTTGCGGTGATGATGTTTCTCGACACTGCGCTGGGCTGAAGATTGATGTTTCGTGAGCCGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGGTTATCACAGGGCCTGATGCGCTGGAGTACCTGAGGGAGCGGGCATGCCCGC < 1:3283741/150‑1 GGCGGGTTTGCGGTGATGATGTTTCTCGACACTGCGCTGGGCTGAAGATTGATGTTTCGTGAGCCGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGGTTATCACAGGGCCTGATGCGCTGGAGTACCTGAGGGAGCGGGCATGCCCGCG > 2:2233176/1‑150 GCGGGTTTGCGGTGATGATGTTTCTCGACACTGCGCTGGGCTGAAGATTGATGTTTCGTGAGCCGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGGTTATCACAGGGCCTGATGCGCTGGAGTACCTGAGGGAGCGGGCATGCCCGCGA > 1:1621306/1‑150 GCGGGTTTGCGGTGATGATGTTTCTCGACACTGCGCTGGGCTGAAGATTGATGTTTCGTGAGCCGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGGTTATCACAGGGCCTGATGCGCTGGAGTACCTGAGGGAGCGGGCATGCCCGCGA > 1:5436502/1‑150 GCGGGTTTGCGGTGATGATGTTTCTCGACACTGCGCTGGGCTGAAGATTGATGTTTCGTGAGCCGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGGTTATCACAGGGCCTGATGCGCTGGAGTACCTGAGGGAGCGGGCATGCCCGCGA < 1:3856635/150‑1 CGGGTTTGCGGTGATGATGTTTCTCGACACTGCGCTGGGCTGAAGATTGATGTTTCGTGAGCCGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGGTTATCACAGGGCCTGATGCGCTGGAGTACCTGAGGGAGCGGGCATGCCCGCGAc > 1:3233898/1‑149 GATGTTTCTCGACACTGCGCTGGGCTGAAGATTGATGTTTCGTGAGCCGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGGTTATCACAGGGCCTGATGCGCTGGAGTACCTGAGGGAGCGGGCATG < 1:2427629/127‑1 GATGTTTCTCGACACTGCGCTGGGCTGAAGATTGATGTTTCGTGAGCCGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGGTTATCACAGGGCCTGATGCGCTGGAGTACCTGAGGGAGCGGGCATG > 2:2427629/1‑127 GCCGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGGTTATCACAGGGCCTGATGCGCTGGAGTACCTGAGGGAGCGGGCATGCCCGCGAACAAGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGACACATCATCACC > 2:4089431/1‑150 CTCTTCGCGGGCTCGCCCGCTCCCACAGGGTTATCACAGGGCCTGATGCGCTGGAGTACCTGAGGGAGCGGGCATGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGA < 2:4966283/130‑1 CTCTTCGCGGGCTCGCCCGCTCCCACAGGGTTATCACAGGGCCTGATGCGCTGGAGTACCTGAGGGAGCGGGCATGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGA > 1:4966283/1‑130 ggaGCGGGCGAGCCCGCTCCCACAGGGTTATCACAGGGCCTGATGCGCTGGAGTACCTGAGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCG > 1:2519899/4‑150 TTCGCGGGCTCGCCCGCTCCCACAGGGTTATCACAGGGCCTGATGCGCTGGAGTACCTGAGGGAGCGGGCATGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCG > 1:228997/1‑150 GCGGGCTCGCCCGCTCCCACAGGGTTATCACAGGGCCTGATGCGCTGGAGTACCTGAGGGAGCGGGCATGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCC > 2:4438966/1‑150 CCGCTCCCACAGGGTTATCACAGGGCCTGATGCGCTGGAGTACCTGAGGGAGCGGGCATGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCA > 1:1571432/1‑150 CGCTCCCACAGGGTTATCACAGGGCCTGATGCGCTGGAGTACCTGAGGGAGCGGGCATGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCAG > 1:2376089/1‑150 CCCACAGGGTTATCACAGGGCCTGATGCGCTGGAGTACCTGAGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCAGGGTC > 1:5412770/1‑150 CCCACAGGGTTATCACAGGGCCTGATGCGCTGGAGTACCTGAGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCAAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCCTCAACCCCAGGGTC > 1:3240289/1‑150 tcttcGCGGGCTCGCCCGCGAAGAGGCCGGCTCACGAAACATCAATATTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCAGGGTCGCCGCTGTCTGGTGCCCGTTGCGGTGGGTTTCGGGGATCtc > 2:4019383/6‑148 ttcGCGGGCTCGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCAGGGTCGCCGCTGTCTGGTGCCCGTTGCGGTGGGTTTCGGGGATCACCT > 1:281426/4‑150 ttcGCGGGCTCGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCAGGGTCGCCGCTGTCTGGTGCCCGTTGCGGTGGGTTTCGGGGATCACCT > 1:1733801/4‑150 ttcGCGGGCTCGCCCGCGAAGAGGCCGGCTCACGAAACAACAATCTTCAGCCCAGCGCAGTGTCGAGAACCATCATCACCGAAAACCCGCCCATCAACCCCACGGTCGCCGCTGTCTGGTGCCCGTTGCGGTGGGTTTCGGGGATCACCT > 1:3361224/4‑150 GCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCAGGGTCGCCGCTGTCTGGTGCCCGTTGCGGTGGGTTTCGGGGATCACCTCGTGGCTGACC > 1:405928/1‑150 GCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCAGGGTCGCCGCTGTCTGGTGCCCGTTGCGGTGGGTTTCGGGGATCACCTCGTGGCTGACC > 1:405857/1‑150 GCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCAGGGTCGCCGCTGTCTGGTGCCCGTTGCGGTGGGTTTCGGGGATCACCTCGTGGCTGACC > 2:2867613/1‑150 GCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCAGGGTCGCCGCTGTCTGGTGCCCGTTGCGGTGGGTTTCGGGGATCACCTCGTGGCTGACC > 2:489174/1‑150 GCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCAGGGACGCCGCTGTCTGGTGCCCGTTGCGGTGGGTTTCGGGGATCACCTCGTGGCTGACC > 2:5089398/1‑150 CCCGCGAAGCGGCCGGCTCACGAAACATCAAACTTCAGCCCAGCGCAGTGTCGAGAAACAACATCACCGCAAACCCGCCCATCAACCCCAGGGTCGCCGCTGTCTGGTGCCCGTTGCGGTGGGTTTCGGGGATCACCTCGTGGCTGACCc < 1:4968564/150‑2 CCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCAGGGTCGCCGCTGTCTGGTGCCCGTTGCGGTGGGTTTCGGGGATCACCTCGTGGCTGACCAC > 1:1544031/1‑150 CGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCAGGGTCGCCGCTGTCTGGTGCCCGTTGCGGTGGGTTTCGGGGATCACCTCGTGGCTGACCACA < 2:5499951/150‑1 GCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCAGGGTCGCCGCTGTCTGGTGCCCGTTGCGGTGGGTTTCGGGGATCACCTCGTGGCTGACCACAA > 2:4645191/1‑150 GAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCAGGGTCGCCGCTGTCTGGTGCCCGTTGCGGTGGGTTTCGGGGATCACCTCGTGGCTGACCACACAG > 2:3293891/1‑150 GAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCAGGGTCGCCGCTGTCTGGTGCCCGTTGCGGTGGGTTTCGGGGATCACCTCGTGGCTGACCACAAAG > 2:3293888/1‑150 GAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCAGGGTCGCCGCTGTCTGGTGCCCGTTGCGGTGGGTTTCGGGGATCACCTCGTGGCTGACCACAAAG > 1:529484/1‑150 GAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCAGGGTCGCCGCTGTCTGGTGACCGTTGCGGTGGGTTTCGGGGATCACCTCGTGGCTGACCACAAAG > 1:457241/1‑150 AAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCAGGGTCGCCGCTGTCTGGTGCCCGTTGCGGTGGGTTTCGGGGATCACCTCGTGGCTGACCACAAAGA < 2:4040019/150‑1 AAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCAGGGTCGCCGCTGTCTGGTGCCCGTTGCGGTGGGTTTCGGGGATCACCTCGTGGCTGACCACAAAGA < 2:4863017/150‑1 AAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCAGGGTCGCCGCTGTCTGGTGCCCGTTGCGGTGGGTTTCGGGGATCACCTCGTGGCTGACCACAAAGA < 2:4863036/150‑1 TTGATGGGCGGGTTTGCGGTGATGATGTTTCTCGACACTGCGCTGGGCTGAAGATTGATGTTTCGTGAGCCGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGGTTATCACAGGGCCTGATGCGCTGGAGTACCTGAGGGAGCGGGCATGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2064732‑2064575‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgcgaaGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCAGGGTCGCCGCTGTCTGGTGCCCGTTGCGGTGGGTTTCGGGGATCACCTCGTGGCTGACCACAAAGA > NC_002947/2064656‑2064803 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |