| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3973868 = | 42 (0.170) | 25 (0.110) | 11/266 | NT | 18.5% | coding (1003/1179 nt) | PP_3498 | transposase |
| ? | NC_002947 | 3973959 = | 180 (0.770) | coding (1094/1179 nt) | PP_3498 | transposase | |||||
TTTTTCGTTCGGTTTGCGTTGGTAAACCTGATCGCTCTGTAACAGGGCCCATATAATCCGCAGATTTCGATTAGCCAGCCTGATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAA‑GAGGCGGCGATCA‑TCTGGCTGATCGGAATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3974020‑3973868‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aatcTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGCCACCGGGGCGCTAGGCGCTCCAACCCCTGCTAGTGAACATTGACCCTA > NC_002947/3973959‑3974107 TTTTTCGTTCGGTTTGCGTTGGTAAACCTGATCGCTCTGTAACAGGGCCCATATAATCCGCAGATTTCGATTAGCCAGCCTGATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAA‑GAGGCGGCGATCA‑TCTGGCTGATCGGA > 1:2666294/1‑150TTTTTCGTTCGGTTTGCGTTGGTAAACCTGATCGCTCTGTAACAGGGCCCATATAATCCGCAGATTTCGATTAGCCAGCCTGATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAA‑GAGGCGGCGATCA‑TCTGGCTGATCGGA < 2:1063046/150‑1TTTTTCGTTCGGTTTGCGTTGGTAAACCTGATCGCTCTGTAACAGGGCCCATATAATCCGCAGATTTCGATTAGCCAGCCTGATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAA‑GAGGCGGCGATCA‑TCTGGCTGATCGGA > 1:4219176/1‑150TTTTTCGTTCGGTTTGCGTTGGTAAACCTGATCGCTCTGTAACAGGGCCCATATAATCCGCAGATTTCGATTAGCCAGCCTGATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAA‑GAGGCGGCGATCA‑TCTGGCTGATCGGA > 1:4219092/1‑150 TTTTCGTTCGGTTTGCGTTGGTAAACCTGATCGCTCTGTAACCGGGCCCATATAATCCGCAGATTTCGATTAGCCAGCCTGATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAA‑GAGGCGGCGATCA‑TCTGGCTGATCGGAA < 1:3517088/150‑1 TTTCGTTCGGTTTGCGTTGGTAAACCTGATCGCTCTGTAACAGGGCCCATATAATCCGCAGATTTCGATTAGCCAGCCTGATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAA‑GAGGCGGCGATCA‑TCTGGCTGATCGGAAT < 2:3748384/150‑1 TTTCGTTCGGTTTGCGTTGGTAAACCTGATCGCTCTGTAACAGGGCCCATATAATCCGCAGATTTCGATTAGCCAGCCTGATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAA‑GAGGCGGCGATCA‑TCTGGCTGATCGGAAT > 1:2912747/1‑150 TTCGTTCGGTTTGCGTTGGTAAACCTGATCGCTCTGTAACAGGGCCCATATAATCCGCAGATTTCGATTAGCCAGCCTGATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAA‑GAGGCGGCGATCA‑TCTGGCTGATCGGAATC > 2:922007/1‑150 GCAGATTTCGATTAGCCAGCCTGATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAA‑GAGGCGGCGATCA‑TCTGGCTGATCGGAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAAC > 1:3622003/1‑150 TTCGATTAGCCAGCCTGATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAA‑GAGGCGGCGATCA‑TCTGGCTGATCGGAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAA > 2:1214183/1‑150 ATTAGCCAGCCTGATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAA‑GAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCG > 1:5171586/1‑150 ATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAA‑GAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGA < 2:2773739/99‑1 ATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAA‑GAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGA > 1:2773739/1‑99 TCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAA‑GAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAG > 2:3069796/1‑150 GCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAA‑GAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCC > 2:4405976/1‑150 GCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAA‑GAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCC > 2:4405946/1‑150 CCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCC > 2:4433399/1‑150 CGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAA‑GAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTC > 2:5376487/1‑150 CGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAA‑GAGGCGGCGATCA‑TCTGGCTGATCGGAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCT > 1:2315497/1‑150 CGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAA‑GAGGCGGCGATCA‑TCTGGCTGATCGGAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCT > 1:5389397/1‑150 CGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAA‑GAGGCGGCGATCA‑TCTGGCTGATCGGAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCT > 1:5389380/1‑150 CGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAA‑GAGGCGGCGATCA‑TCTGGCTGATCGGAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCT > 2:3820779/1‑150 GCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAA‑GAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCT > 1:5103054/1‑150 CCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAA‑GAGGCGGCGATCA‑TCTGGCTGATCGGAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGA > 2:5292669/1‑150 CCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAA‑GAGGCGGCGATCA‑TCTGGCTGATCGGAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGA > 2:1056487/1‑150 CCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAA‑GAGGCGGCGATCA‑TCTGGCTGATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGA > 2:4766265/1‑150 CCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAA‑GAGGCGGCGATCA‑TCTGGCTGATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGA > 2:5173921/1‑150 CTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTG > 1:1975131/1‑150 CTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAA‑GAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGA > 1:4861278/1‑150 TCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGA > 1:4896047/1‑150 TCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGA > 1:4582511/1‑150 TCCTTGCGCCCAAGGCGGGATAGCCAGCGCAA‑GAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGAC > 2:969386/1‑150 AA‑GAGGCGGCGATCA‑TCTGGCTGATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGCCACCGGGGCGCTAGGCG > 2:1619308/1‑150 ATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGCCACCGGGGCGCTAGGCGCTCCAACCCCTGCTAGTGAACATTGACCC > 1:559458/1‑150 CTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGCCACCGGGGCGCTAGGCGCTCCAACCCCTGCTAGTGAACATTGACCCTA < 2:3943989/150‑1 CTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGCCACCGGGGCGCTAGGCGCTCCAACCCCTGCTAGTGAACATTGACCCTA > 1:5284396/1‑150 TTTTTCGTTCGGTTTGCGTTGGTAAACCTGATCGCTCTGTAACAGGGCCCATATAATCCGCAGATTTCGATTAGCCAGCCTGATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAA‑GAGGCGGCGATCA‑TCTGGCTGATCGGAATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3974020‑3973868‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aatcTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGCCACCGGGGCGCTAGGCGCTCCAACCCCTGCTAGTGAACATTGACCCTA > NC_002947/3973959‑3974107 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |