New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3973868 =	42 (0.170)	25 (0.110)	11/266	NT	18.5%	coding (1003/1179 nt)	PP_3498	transposase
	?	NC_002947	3973959 =	180 (0.770)					coding (1094/1179 nt)	PP_3498	transposase

GAATGTATTCCGCCTTCTTCGGTATCGTGCCCGATCAGCACAGCAGCGGAAACAAAATCAGATTGGGCAAGATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAA  >  NC_002947/3973719‑3974017                                                                                                                                                      |                                                                                                                                                        tagggtcaatgttcactagcaggggttggagcgcctagcgccccggtggcattacccggttggtcagaggctcatagccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccatataatccgcag                                                                                                                                                         >  1:5284396‑M1/150‑150 (MQ=255) tagggtcaatgttcactagcaggggttggagcgcctagcgccccggtggcattacccggttggtcagaggctcatagccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccatataatccgcag                                                                                                                                                         <  2:3943989‑M1/1‑1 (MQ=255)   gggtcaatgttcactagcaggggttggagcgcctagcgccccggtggcattacccggttggtcagaggctcatagccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccatataatccgcaGAt                                                                                                                                                       >  1:559458‑M1/148‑150 (MQ=255)                                cgcctagcgccccggtggcattacccggttggtcagaggctcatagccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccagataatccgcaGATTTCGATCAGCCAGA‑TGATCGCCGCCTC‑tt                                                                                                                        >  2:1619308‑M1/119‑150 (MQ=255)                                                               gtcagaggctcatagccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccagataatccgcaGATTTCGATTAGCCAGCCTGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAagga                                                                                          >  2:969386‑M1/88‑150 (MQ=255)                                                                tcagaggctcatagccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccatataatccgcaGATTTCGATTAGCCAGCCTGATCGCCGCCTCCTTGCGCTGGCTATCCCGCCTTGGGCGCAagga                                                                                          >  1:4896047‑M1/87‑150 (MQ=255)                                                                tcagaggctcatagccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccatataatccgcaGATTTCGATTAGCCAGCCTGATCGCCGCCTCCTTGCGCTGGCTATCCCGCCTTGGGCGCAagga                                                                                          >  1:4582511‑M1/87‑150 (MQ=255)                                                                tcagaggctcatagccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccatataatccgcaGATTTCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAaggagg                                                                                        >  2:4766265‑M1/87‑150 (MQ=255)                                                                tcagaggctcatagccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccatataatccgcaGATTTCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAaggagg                                                                                        >  2:5173921‑M1/87‑150 (MQ=255)                                                                tcagaggctcatagccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccatataatccgcaGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAaggagg                                                                                        >  2:1056487‑M1/87‑150 (MQ=255)                                                                tcagaggctcatagccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccagataatccgcaGATTTCGATTAGCCAGCCTGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAaggag                                                                                         >  1:4861278‑M1/87‑150 (MQ=255)                                                                tcagaggctcatagccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccagataatccgcaGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAaggagg                                                                                        >  2:5292669‑M1/87‑150 (MQ=255)                                                                 cagaggctcatagccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccatataatccgcaGATTTCGATTAGCCAGCCTGATCGCCGCCTCCTTGCGCTGGCTATCCCGCCTTGGGCGCAaggag                                                                                         >  1:1975131‑M1/86‑150 (MQ=255)                                                                  agaggctcatagccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccatataatccgcaGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAggcg                                                                                      >  2:3820779‑M1/85‑150 (MQ=255)                                                                  agaggctcatagccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccatataatccgcaGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAggcg                                                                                      >  1:5389397‑M1/85‑150 (MQ=255)                                                                  agaggctcatagccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccatataatccgcaGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAggcg                                                                                      >  1:5389380‑M1/85‑150 (MQ=255)                                                                  agaggctcatagccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccagataatccgcaGATTTCGATTAGCCAGCCTGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAggc                                                                                       >  1:5103054‑M1/85‑150 (MQ=255)                                                                  agaggctcatagccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccagataatccgcaGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAggcg                                                                                      >  1:2315497‑M1/85‑150 (MQ=255)                                                                   gaggctcatagccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccatataatccgcaGATTTCGATTAGCCAGCCTGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAggcg                                                                                      >  2:5376487‑M1/84‑150 (MQ=255)                                                                     ggctcatagccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccatataatccgcaGATTTCGATTAGCCAGCCTGATCGCCGCCTCCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAggcgg                                                                                     >  2:4433399‑M1/82‑150 (MQ=255)                                                                     ggctcatagccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccatataatccgcaGATTTCGATTAGCCAGCCTGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAggcggc                                                                                    >  2:4405946‑M1/82‑150 (MQ=255)                                                                     ggctcatagccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccatataatccgcaGATTTCGATTAGCCAGCCTGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAggcggc                                                                                    >  2:4405976‑M1/82‑150 (MQ=255)                                                                       ctcatagccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccatataatccgcaGATTTCGATTAGCCAGCCTGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGa                                                                                  >  2:3069796‑M1/80‑150 (MQ=255)                                                                                     cggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccagataatccgcaGATTTCGATTAGCCAGCCTGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAAt                                                                    >  1:5171586‑M1/66‑150 (MQ=255)                                                                                        tttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccatataatccgcaGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGaa                                                                >  2:1214183‑M1/63‑150 (MQ=255)                                                                                              gttcggtttgcgttggtaaacctgatcgctctgtaacagggcccatataatccgcaGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGc                                                          >  1:3622003‑M1/57‑150 (MQ=255)                                                                                                      aGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATtata                                                  >  1:2642478/1‑150 (MQ=11)                                                                                                        ccTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATg                                                >  2:4060679/1‑150 (MQ=32)                                                                                                         cTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATgg                                               <  2:4259802/150‑1 (MQ=32)                                                                                                         cTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATgg                                               <  2:2883067/150‑1 (MQ=32)                                                                                                           gatgatCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGc                                             <  2:5003135/150‑1 (MQ=32)                                                                                                           gatgatCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGc                                             <  1:3833667/150‑1 (MQ=32)                                                                                                            atgatCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGcc                                            >  1:3876463/1‑150 (MQ=32)                                                                                                            aagatCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGcc                                            <  1:3410380/148‑1 (MQ=17)                                                                                                                tCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCTAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGt                                        >  2:3185015/1‑150 (MQ=17)                                                                                                                tCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGt                                        >  2:4708884/1‑150 (MQ=32)                                                                                                                tCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGt                                        >  1:4171517/1‑150 (MQ=32)                                                                                                                tCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑GTGCGCTGGCTATCCCGCCTTGGGCGCACGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGt                                        <  2:3196007/150‑1 (MQ=17)                                                                                                                    gggCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACa                                    <  1:1895198/150‑1 (MQ=32)                                                                                                                    gggCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACa                                    >  2:4419917/1‑150 (MQ=32)                                                                                                                     ggCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACag                                   <  1:953781/150‑1 (MQ=32)                                                                                                                      gcgcgcATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACaga                                  <  1:2218402/150‑1 (MQ=32)                                                                                                                      gcgcgcATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACaga                                  <  1:890945/150‑1 (MQ=32)                                                                                                                      gcgcgcATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACaga                                  <  2:4275627/150‑1 (MQ=32)                                                                                                                        gcgcATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGc                                <  2:1035198/150‑1 (MQ=32)                                                                                                                        gcgcATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGc                                <  2:5259573/150‑1 (MQ=32)                                                                                                                          gcATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGa                              >  2:380977/1‑150 (MQ=32)                                                                                                                          gcATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGa                              >  2:2512764/1‑150 (MQ=32)                                                                                                                          gcATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTGGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGa                              >  2:380979/1‑150 (MQ=17)                                                                                                                          gcATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TCATCGCCGCCTC‑GTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAAGCGAAATCTGCGGATGAGATGGGCCCTGTTACAGAGCGa                              >  2:4728329/1‑150 (MQ=11)                                                                                                                           tctgtaacagggcccatataatccgcaGATTTCGATTAGCCAGCCTGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGAt                                                                                 <  2:2773739‑M1/72‑1 (MQ=255)                                                                                                                           tctgtaacagggcccatataatccgcaGATTTCGATTAGCCAGCCTGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGAt                                                                                 >  1:2773739‑M1/28‑99 (MQ=255)                                                                                                                             ttCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCa                           >  1:5054226/1‑150 (MQ=32)                                                                                                                             ttCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCa                           >  1:4822443/1‑150 (MQ=32)                                                                                                                              tCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAg                          <  1:3117479/150‑1 (MQ=32)                                                                                                                              tCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAg                          <  1:695721/150‑1 (MQ=32)                                                                                                                                cGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGt                        >  1:5435648/1‑150 (MQ=32)                                                                                                                                  tCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGttt                      <  2:3746532/150‑1 (MQ=32)                                                                                                                                   cTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTa                     >  2:533124/1‑150 (MQ=32)                                                                                                                                      gAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCa                  >  2:2116090/1‑150 (MQ=32)                                                                                                                                       aGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAACCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCaa                 <  1:2448718/150‑1 (MQ=17)                                                                                                                                        gCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAAc                <  2:3807846/150‑1 (MQ=32)                                                                                                                                        gCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAAc                >  1:5630311/1‑150 (MQ=32)                                                                                                                                        gCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAAc                <  2:4994693/150‑1 (MQ=32)                                                                                                                                        gCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAAc                <  1:1064095/150‑1 (MQ=32)                                                                                                                                        gCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAAc                <  2:4994623/150‑1 (MQ=32)                                                                                                                                        gCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAAc                >  1:4747720/1‑150 (MQ=32)                                                                                                                                         ccAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACg               >  2:4513963/1‑150 (MQ=32)                                                                                                                                             cTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCaaa           <  2:1655736/150‑1 (MQ=32)                                                                                                                                               aaGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAAcc         <  2:2582028/150‑1 (MQ=32)                                                                                                                                                  gCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCt                                          <  2:4818872/114‑1 (MQ=32)                                                                                                                                                  gCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCt                                          >  1:4818872/1‑114 (MQ=32)                                                                                                                                                  gCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACcgta      <  1:4989366/150‑3 (MQ=17)                                                                                                                                                  gCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACcgaa      <  1:2125449/150‑1 (MQ=32)                                                                                                                                                  gCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACcgaa      >  1:4124142/1‑150 (MQ=32)                                                                                                                                                  gCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACcgaa      <  2:3327622/150‑1 (MQ=32)                                                                                                                                                  gCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACcgaa      <  1:842556/150‑1 (MQ=32)                                                                                                                                                   ccTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAgg                         >  2:4384907/1‑130 (MQ=32)                                                                                                                                                   ccTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAgg                         <  1:4384907/130‑1 (MQ=32)                                                                                                                                                   ccTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACcgaac     >  1:4443580/1‑150 (MQ=32)                                                                                                                                                    cTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCGGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACcgaacg    >  2:2399740/1‑150 (MQ=17)                                                                                                                                                     tGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGc              <  1:2471289/139‑1 (MQ=32)                                                                                                                                                     tGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGc              >  2:2471289/1‑139 (MQ=32)                                                                                                                                                     tGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACcgaacga   >  1:5382785/1‑150 (MQ=32)                                                                                                                                                     tGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACcgaacga   >  2:1146602/1‑150 (MQ=32)                                                                                                                                                      GATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACcgaacgaa  >  2:922007‑M1/1‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                                        GAATGTATTCCGCCTTCTTCGGTATCGTGCCCGATCAGCACAGCAGCGGAAACAAAATCAGATTGGGCAAGATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGA‑TGATCGCCGCCTC‑TTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAA  >  NC_002947/3973719‑3974017

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.