| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4850122 = | 129 (0.530) | 12 (0.060) | 9/242 | NT | 9.7% | intergenic (+14/‑123) | PP_4260/PP_4261 | hypothetical protein/cation‑transporting P‑type ATPase |
| ? | NC_002947 | 4850215 = | 109 (0.510) | intergenic (+107/‑30) | PP_4260/PP_4261 | hypothetical protein/cation‑transporting P‑type ATPase | |||||
ACGGGCAGGGCGCAGTGGTAGCAGGGGGTCGGTTGGGTCATAGGGCAGACACTGCTCAGGCAGATAGGAAACCCTGTGGGAGCGGGCGCGCCCGCGAATGCGTCAGACCTGGAAATACCTTTGCCTGAGCTATCGCATTCGCGGGCGTGCCCGCTCCCACAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4850285‑4850122‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccacagggTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTG > NC_002947/4850215‑4850361 ACGGGCAGGGCGCAGTGGTAGCAGGGGGTCGGTTGGGTCATAGGGCAGACACTGCTCAGGCAGATAGGAAACCCTGTGGGAGCGGGCGCGCCCGCGAATGCGTCAGACCTGGAAATACCTTTGCCTGAGCTATCGCATTCGCGGGCGTGC < 1:5425871/150‑1 CGGGCAGGGCGCAGTGGTAGGAGGGGGTGGGTTGGGTCTTAGGGCAGTCACTGGTCAGGCAGATAGGAAACGCTGTGGGAGCGGGCGCGCCCGCGAATGCGTCAGACGTGGAAATACCTTTGCCTGAGCTATCGCTTTCGGGGGCGTGCC < 2:3633151/150‑1 CGGGCAGGGCGCAGTGGTAGCAGGGGGTCGGTTGGGTCATAGGGAAGACACTGCTCAGGCAGATAGGAAACCCTGTGGGAGCGGGCGCGCCCGCGAATGCGTCAGACCTGGAAATACCTTTGCCTGAGCTATCGCATTCGCGGGCGTGCC < 2:3418909/150‑1 GGGCAGGGCGCAGTGGTAGCAGGGGGTCGGTTGGGTCATAGGGCAGACACTGCTCAGGCAGATAGGAAACCCTGTGGGAGCGGGCGCGCCCGCGAATGCGTCAGACCTGGAAATACCTTTGCCTGAGCTATCGCATTCGCGGGCGTGCCC > 2:2755000/1‑150 GGGCAGGGCGCAGTGGTAGCAGGGGGTCGGTTGGGTCATAGGGCAGACACTGCTCAGGCAGATAGGAAACCCTGTGGGAGCGGGCGCGCCCGCGAATGCGTCAGACCTGGAAATACCTTTGCCTGAGCTATCGCATTCGCGGGCGTGCCC > 2:2754979/1‑150 GGGCAGGGCGCAGTGGTAGCAGGGGGTCGGTTGGGTCATAGGGCAGACACTGCTCAGGCAGATAGGAAACCCTGTGGGAGCGGGCGCGCCCGCGAATGCGTCAGACCTGGAAATACCTTTGCCTGAGCTATCGCATTCGCGGGCGTGCCC > 2:1386535/1‑150 GGCAGGGCGCAGTGGTAGCAGGGGGTCGGTTGGGTCATAGGGCAGACACTGCTCAGGCAGATAGGAAACCCTGTGGGAGCGGGCGCGCCCGCGAATGCGTCAGACCTGGAAATACCTTTGCCTGAGCTATCGCATTCGCGGGCGTGCCCG > 2:1871128/1‑150 GCAGGGCGCAGTGGTAGCAGGGGGTCGGTTGGGTCATAGGGCAGACACTGCTCAGGCAGATAGGAAACCCTGTGGGAGCGGGCGCGCCCGCGAATGCGTCAGACCTGGAAATACCTTTGCCTGAGCTATCGCATTCGCGGGCGTGCCCGC > 2:3219663/1‑150 AGGGCGCAGTGGTAGCTGGGGGTCGGTTGGGTCATAGGGCAGACACTGCTCCGGCTGATAGGAAACCCTGTGGGAGCGGGCGCGCCCGCGAATGCGTCAGACCTGGAAATACCTTTGCCTGAGCTATCGCATTCGCGGGCGTGCCCGCTC < 1:5004862/150‑1 AGGGCGCAGTGGTAGCAGGGGGTCGGTTGGGTCATAGGGCAGACACTGCTCAGGCAGATAGGAAACCCTGTGGGAGCGGGCGCGCCCGCGAATGCGTCAGACCTGGAAATACCTTTGCCTGAGCTATCGCATTCGCGGGCGTGCCCGCTC > 2:5146749/1‑150 AGGGCGCAGTGGTAGCAGGGGGTCGGTTGGGTCATAGGGCAGACACTGCTCAGGCAGATAGGAAACCCTGTGGGAGCGGGCGCGCCCGCGAATGCGTCAGACCTGGAAATACCTGTGCCTGAGCTATCGCAGTCGCGGGCGTGCCCGCTC > 2:2862924/1‑150 GGCGCAGTGGTAGCAGGGGGTCGGTTGGGTAATAGGGCAGACACTGCTCAGGCAGATAGGAAACCCTGTGGGAGCGGGCGCGCCCGCGAATGCGTCAGACCTGGAAATACCTTTGCCTGAGCTATCGCATTCGCGGGCACGCCCGCgaat < 1:896244/150‑5 GCAGTGGTAGCAGGGGGTCGGTTGGGTCATAGGGCAGACACTGCTCAGGCAGATAGGAAACCCTGTGGGAGCGGGCGCGCCCCCGAATGCGTCAGACCTGGAAATAACGTTGCCTGAGCTATCGCATTCGCGGGCGGGCCCGCACCCACA > 1:20899/1‑150 AGTGGTAGCAGGGGGTCGGTTGGGTCATAGGGCAGACACTGCTCAGGCAGATAGGAAACCCTGTGGGAGCGGGCGCGCCCGCGAAAGCGTCAGACCTGGAAATACCTTTGCCTGAGCTATCGCATTCGCGGGCGTGCCCGCTCCCACAGG > 2:578280/1‑150 gGGTAGCAGGGGGTCGGTTGGGTCATAGGGCAGACACTGCTCAGGCAGATAGGAAACCCTGTGGGAGCGGGCGCGCCCGCGAATGCGGCAGACCACGACATACCGTTGCCAGGGCTATCGCATTCCCGGGCGGGCCCCCACCCACCGGGc > 1:2430749/2‑149 GCGCGCCCGCGAATGCGTCAGACCTGGAAATACCTTTGCCTGAGCTATCGCAGTCGCGGGCGTGCCCGCTCCCACAGGGTGTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGT > 2:3304986/1‑150 CCCGCGAATGCGTCAGACCTGGAAATACCTTTGCCTGAGCTATCGCATTCGCGGGCGTGCCCGCTCCCACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCA > 1:1888179/1‑150 CCCGCGAATGCGTCAGACCTGGAAATACCTTTGCCTGAGCTATCGCATTCGCGGGCGTGCCCGCTCCCACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCA > 2:3829849/1‑150 CCGCGAATGCGTCAGACCTGGAAATACCTTTGCCTGAGCTATCGCATTCGCGGGCGCGCCCGCTCCCACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCAC > 1:4164143/1‑150 CCGCGAATGCGTCAGACCTGGAAATACCTTTGCCTGAGCTATCGCATTCGCGGGCGCGCCCGCTCCCACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCAC > 2:2145064/1‑150 CCGCGAATGCGTCAGACCTGGAAATACCTTTGCCTGAGCTATCGCATTCGCGGGCGCGCCCGCTCCCACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCAC > 1:4000836/1‑150 CGCGAATGCGTCAGACCTGGAAATACCTTTGCCTGAGCTATCGCATTCGCGGGCGTGCCCGCTCCCACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACC > 2:3848389/1‑150 GCGAATGCGTCAGACCTGGAAATACCTTTGCCTGAGCTATCGCATTCGCGGGCGTGCCCGCTCCCACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCG > 1:4796230/1‑150 AATGCGTCAGACCTGGAAATACCTTTGCCTGAGCTATCGCATTCGCGGGCGTGCCCGCTCCCACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCA > 2:175926/1‑150 AATACCTTTGCCTGAGCTATCGCATTCGCGGGCGCGCCCGCTCCCACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTG < 2:4000836/150‑1 TTGCCTGAGCTATCGCATTCGCGGGCGTGCCCGCTCCCACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCG < 1:3848389/150‑1 TGAGCTATCGCATTCGCGGGCGTGCCCGCTCCCACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAG > 2:5478922/1‑150 CCCGCTCCCACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGC < 1:2173350/150‑1 CCGCTCCCACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCT > 1:5266245/1‑150 GCTCCCACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGT < 2:3731837/150‑1 CTCCCACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTC < 1:5252298/150‑1 aCCCACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCGATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCA < 1:55056/149‑1 TCCCACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCA < 1:3782148/150‑1 TCCCACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCA < 1:717354/150‑1 TCCCACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCA > 2:4477323/1‑150 TCCCACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCA < 2:3011154/150‑1 TCCCACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCA < 1:4340561/150‑1 CCACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGG > 1:1003287/1‑150 CACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCTGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGC > 1:1766179/1‑150 CACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGC < 1:2882515/150‑1 CACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGC > 2:403976/1‑150 CACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCCGCTGTCAGGC > 2:403769/1‑150 ACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCG > 1:4525436/1‑150 GGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCACCCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTG < 2:4201945/150‑1 GGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGTCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTG < 2:4291795/150‑1 GGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTG < 1:2684693/150‑1 GGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTG < 1:3690363/150‑1 GGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTG < 2:1692677/150‑1 GGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTG < 1:45072/150‑1 ACGGGCAGGGCGCAGTGGTAGCAGGGGGTCGGTTGGGTCATAGGGCAGACACTGCTCAGGCAGATAGGAAACCCTGTGGGAGCGGGCGCGCCCGCGAATGCGTCAGACCTGGAAATACCTTTGCCTGAGCTATCGCATTCGCGGGCGTGCCCGCTCCCACAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4850285‑4850122‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccacagggTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTG > NC_002947/4850215‑4850361 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |