New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 247713269 (0.290)9 (0.040) 4/228 NT 5.3% intergenic (+44/+105) PP_2166/PP_2167 anti‑anti‑sigma factor/PhoD‑like phosphatase
?NC_002947 = 4329770 263 (1.310)intergenic (+142/+125) pbpG/PP_3795 murein D‑alanyl‑D‑alanine endopeptidase/hypothetical protein

Only 100 of 335 total aligned reads displayed.

CCGAATGACCGCCATATCCTGGAACGTGCGGGCTTGTCCGCGAAGCAGACAACGCGGCGGATAGCACGGGCTTCGTCCGTGTTCGCGAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTCGCGGGTAAACCCGCGCCTACAGCGGCCTGTGCATGTCCAGTCAGGCCGTAGCGCTGACCATACCT  >  NC_002947/4329621‑4329919
                                                                                                                                                     |                                                                                                                                                     
ccGAATGACCGCCATATCCTGGAACGTGCGGGCTTGTCCGCGAAGCAGACAACGCGGCGGATAGCACGGGCTTCGTCCGTGTTCGCGAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGgt                                                                                                                                                       <  2:4718168/150‑1 (MQ=255)
  gAATGACCGCCATATCCTGGAACGTGCGGGCTTGTCCGCGAAGCAGACAACGCGGCGGATAGCACGGGCTTCGTCCGTGTTCGCGAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTgt                                                                                                                                                     <  1:3935843‑M2/150‑3 (MQ=255)
        ccGCCATATCCTGGAACGTGCGGGCTTGTCCGCGAAGCAGACAACGCGGCGGATAGCACGGGCTTCGTCCGTGTTCGCGAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTgtaggagc                                                                                                                                               >  2:910198‑M2/1‑142 (MQ=255)
         cGCCATATCCTGGAACGTGCGGGCTTGTCCGCGAAGCAGACAACGCGGCGGATAGCACGGGCTTCGTCCGTGTTCGCGAGGCAACCCGCGCCTACGACGGCCTGCGCCCAATCGCCCATGTGTATCCAGCCCCTATCAGGTgtcggagcg                                                                                                                                              <  2:1213485‑M2/150‑10 (MQ=255)
           ccATATCCTGGAACGTGCGGGCTTGTCCGCGAAGCAGACAACGCGGCGGATAGCACGGGCTTCGTCCGTGTTCGCGAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTgtaggagcggg                                                                                                                                            <  1:5563761‑M2/150‑12 (MQ=255)
           ccATATCCTGGAACGTGCGGGCTTGTCCGCGAAGCAGACAACGCGGCGGAGAGCACGGGCTTCGTCCGTGTTCGCGAGGACACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTgtaggagcggg                                                                                                                                            <  2:3622472‑M2/150‑12 (MQ=255)
                tCCTGGAACGTGCGGGCTTGTCCGCGAAGCAGACAACGCGGCGGATAGCACGGGCTTCGTCCGTGTTCGCGAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTgtaggagcgggtttac                                                                                                                                       <  2:5530476‑M2/150‑17 (MQ=255)
                tCCTGGAACGTGCGGGCTTGTCCGCGAAGCAGACAACGCGGCGGATAGCACGGGCTTCGTCCGTGTTCGCGAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTgtaggagcgggtttac                                                                                                                                       <  1:2844085‑M2/150‑17 (MQ=255)
                 ccTGGAACGTGCGGGCTTGTCCGCGAAGCAGACAACGCGGCGGATAGCACGGGCTTCGTCCGTGTTCGCGAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTgtaggagcgggtttacc                                                                                                                                      >  1:1649043‑M2/1‑133 (MQ=255)
                  cTGGAACGTGCGGGCTTGTCCGCGAAGCAGACAACGCGGCGGATAGCACGGGCTTCGTCCGTGTTCGCGAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTgtaggagcgggtttaccc                                                                                                                                     <  2:169299‑M2/150‑19 (MQ=255)
                    ggAACGTGCGGGCTTGTCCGCGAAGCAGACAACGCGGCGGATAGCACGGGCTTCGTCCGTGTTCGCGAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTgtaggagcgggtttacccgc                                                                                                                                   >  2:187713‑M2/1‑130 (MQ=255)
                       aCGTGCGGGCTTGTCCGCGAAGCAGACAACGCGGCGGATAGCACGGGCTTCGTCCGTGTTCGCGAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTgtaggagcgggtttacccgcgaa                                                                                                                                >  1:3796352‑M2/1‑127 (MQ=255)
                        cGTGCGGGCTTGTCCGCGAAGCAGACAACGCGGCGGATAGCACGGGCTTCGTCCGTGTTCGCGAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAAt                                                                                                                               >  2:515184/1‑150 (MQ=255)
                           gCGGGCTTGTCCGCGAAGCAGACAACGCGGCGGATAGCACGGGCTTCGTCCGTGTTCGCGAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACg                                                                                                                            <  1:30006/150‑1 (MQ=255)
                             gggCTTGTCCGCGAAGCAGACAACGCGGCGGATAGCACGGGCTTCGTCCGTGTTCGCGAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGt                                                                                                                          >  1:5258815/1‑150 (MQ=255)
                               gCTTGTCCGCGAAGCAGACAACGCGGCGGATAGCACGGGCTTCGTCCGTGTTCGCGAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTcg                                                                                                                        <  2:2261016/150‑1 (MQ=255)
                                  tGTCCGCGAAGCAGACAACGCGGCGGATAGCACGGGCTTCGTCCGTGTTCGCGAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCgcgg                                                                                                                     <  2:2388247/150‑1 (MQ=255)
                                    tCCGCGAAGCAGACAACGCGGCGGATAGCACGGGCTTCGTCCGTGTTCGCGAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCgcggcg                                                                                                                   >  2:326803/1‑150 (MQ=255)
                                    tCCGCGAAGCAGACAACGCGGCGGATAGCACGGGCTTCGTCCGTGTTCGCGAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCgcggcg                                                                                                                   >  2:3988911/1‑150 (MQ=255)
                                    tCCGCGAAGCAGACAACGCGGCGGATAGCACGGGCTTCGTCCGTGTTCGCGAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCgcggcg                                                                                                                   >  2:5622918/1‑150 (MQ=255)
                                    tCCGCGAAGCAGACAACGCGGCGGATAGCACGGGCTTCGTCCGTGTTCGCGAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCgcggcg                                                                                                                   >  2:1999447/1‑150 (MQ=255)
                                     ccGCGAAGCAGACAACGCGGCGGATAGCCCGGGCTTCGTCCGGGTTCGCGAGGAAACCCGCGCCTCCGACGGCCTGCGCCCACTCACCCAGGTGTATCCCCCCCCACTCCGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGcggcgg                                                                                                                  <  2:1101472/150‑1 (MQ=25)
                                        cgAAGCAGACAACGCGGCGGATAGCACGGGCTTCGTCCGTGTTCGCGAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCaa                                                                                                               <  2:1388946/150‑1 (MQ=255)
                                           aGCAGACAACGCGGCGGATAGCACGGGCTTCGTCCGTGTTCGCGAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACgg                                                                                                            <  2:1535563/150‑1 (MQ=255)
                                             cAGACAACGCGGCGGATAGCACGGGCTTCGTCCGTGTTCGCGAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTg                                                                                                          >  2:649633/1‑150 (MQ=255)
                                               gACAACGCGGCGGATAGCACGGGCTTCGTCCGTGTTCGCGAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGaa                                                                                                        <  2:259712/150‑1 (MQ=255)
                                                aCAACGCGGCGGATAGCACGGGCTTCGTCCGTGTTCGCGAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAAc                                                                                                       <  1:1085883/150‑1 (MQ=255)
                                                  aaCGCGGCGGATAGCACGGGCTTCGTCCGTGTTCGCGAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAAcgg                                                                                                     >  2:789127/1‑150 (MQ=255)
                                                     gcggcgGATAGCACGGGCTTCGTCCGTGTTCGCGAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAAcggcgg                                                                                                  >  2:4198132/1‑150 (MQ=255)
                                                                cACGGGCTTCGTCCGTGTTCGCGAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTgg                                                                                       >  2:4554885/1‑150 (MQ=255)
                                                                cACGGGCTTCGTCCGTGTTCGCGAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTgg                                                                                       >  2:14648/1‑150 (MQ=255)
                                                                 aCGGGCTTCGTCCGTGTTCGCGAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGc                                                                                      <  1:5390966/150‑1 (MQ=255)
                                                                   gggCTTCGTCCGTGTTCGCGAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAATGGCGGGTGGAAATTGGCca                                                                                    >  1:3189550/1‑150 (MQ=255)
                                                                   gggCTTCGTCCGTGTTCGCGAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCca                                                                                    <  1:410376/150‑1 (MQ=255)
                                                                    ggCTTCGTCCGTGTTCGCGAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCcag                                                                                   >  1:3614333/1‑150 (MQ=255)
                                                                    ggCTTCGTCCGTGTTCGCGAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCcag                                                                                   >  2:4594155/1‑150 (MQ=255)
                                                                      cTTCGTCCGTGTTCGCGAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCcagca                                                                                 <  2:5511411/150‑1 (MQ=255)
                                                                       ttCGTCCGTGTTCGCGAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCcagcag                                                                                >  2:2306885/1‑150 (MQ=255)
                                                                       ttCGTACGTGTTCGCGAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCcagcag                                                                                >  1:1813524/1‑150 (MQ=255)
                                                                        tCGTCCGTGTTCGCGAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAgg                                                                               <  2:334911/150‑1 (MQ=255)
                                                                        tCGTCCGTGTTCGCGAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAgg                                                                               <  1:5177876/150‑1 (MQ=255)
                                                                          gTCCGTGTTCGCGAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGggc                                                                             >  1:1293005/1‑150 (MQ=255)
                                                                          gTCAGTGTTCGCGAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGggc                                                                             <  2:3113138/150‑1 (MQ=255)
                                                                           tCCGTGTTCGCGAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGggcc                                                                            >  1:389133/1‑150 (MQ=255)
                                                                           tCCGTGTTCGCGAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGggcc                                                                            >  1:1926708/1‑150 (MQ=255)
                                                                              gtgtTCGCGAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGggccggc                                                                         <  2:5583710/150‑1 (MQ=255)
                                                                               tgtTCGCGAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCCATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGACATTGGCCAGCAGggccggcc                                                                        >  2:3519210/1‑150 (MQ=255)
                                                                                    gcgAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTc                                                                   >  1:4550570/1‑150 (MQ=255)
                                                                                    gcgAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTc                                                                   >  2:2686056/1‑150 (MQ=255)
                                                                                    gcgAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTc                                                                   >  2:427982/1‑150 (MQ=255)
                                                                                    gcgAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTc                                                                   >  2:4805307/1‑150 (MQ=255)
                                                                                    gcgAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTc                                                                   >  1:2002922/1‑150 (MQ=255)
                                                                                        ggAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTCGCgg                                                               <  2:864128/150‑1 (MQ=255)
                                                                                         gAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTCGCggg                                                              >  1:872296/1‑150 (MQ=255)
                                                                                             cccGCTCCTACGACGGCCTGCGCCCAAACACCAATGTGTGTCCACCCCCAATCAGGTgtaggagcgggtttacccgcgaagaggccggcacaggctatagatcagctccgctccagcgcattgaccagatcatggaaggcttcgcggttg                                                          <  1:2096299‑M2/150‑94 (MQ=255)
                                                                                              ccGCTCCTACGACGGCCTGCGCCCAAACACCAATGTGTGTCCACCCCCAATCAGGTgtaggagcgggtttacccgcgaagaggccggcacaggctgtagatcagctccgctccagcgcattgaccagatcatggaaggcttcgcggttgg                                                         <  1:3827352‑M2/150‑95 (MQ=255)
                                                                                              ccGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTCGCGGGTAAAc                                                         >  2:404384/1‑150 (MQ=255)
                                                                                              ccGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTCGCGGGTAAAc                                                         >  1:5591114/1‑150 (MQ=255)
                                                                                              ccGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTCGCGGGTAAAc                                                         >  1:4737418/1‑150 (MQ=255)
                                                                                                  gcCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTCGCGGGTAAACCcgc                                                     <  1:3082998/150‑1 (MQ=255)
                                                                                                  gcCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTCGCGGGTAAACCcgc                                                     <  1:790013/150‑1 (MQ=255)
                                                                                                  gcCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTCGCGGGTAAACCcgc                                                     <  2:5118817/150‑1 (MQ=255)
                                                                                                  gcCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTCGCGGGTAAACCcgc                                                     <  1:5360065/150‑1 (MQ=255)
                                                                                                    cTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTCGCGGGTAAACCCgcgc                                                   <  1:487377/150‑1 (MQ=255)
                                                                                                     tACGACGGCCTGCGCCCACTCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTCGCGGGTAAACCCGCGcc                                                  <  1:335592/150‑1 (MQ=255)
                                                                                                        gacgGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTCGCGGGTAAACCCGCGCCTAc                                               >  2:3047931/1‑150 (MQ=255)
                                                                                                           ggCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTCGCGGGTAAACCCGCGCCTACAGc                                            <  1:2739023/150‑1 (MQ=255)
                                                                                                           ggCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTCGCGGGTAAACCCGCGCCTACAGc                                            <  1:3299652/150‑1 (MQ=255)
                                                                                                              cTGCGCCCAATCACCAATGTGTATCCACCCCCACTCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTCGCGGGTAAACCCGCGCCTACAGCGGc                                         <  1:2655238/150‑1 (MQ=255)
                                                                                                              cTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTCGCGGGTAAACCCGCGCCTACAGCGGc                                         >  1:667564/1‑150 (MQ=255)
                                                                                                               tGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTCGCGGGTAAACCCGCGCCTACAGCGGcc                                        >  1:2377525/1‑150 (MQ=255)
                                                                                                                gcgcCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTCGCGGGTAAACCCGCGCCTACAGCGGCCt                                       <  2:2549518/150‑1 (MQ=255)
                                                                                                                 cgcCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTCGCGGGTAAACCCGCGCCTACAGCGGCCtg                                      <  2:1786356/150‑1 (MQ=255)
                                                                                                                    ccAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTCGCGGGTAAACCCGCGCCTACAGCGGCCTGTGc                                   >  2:3147798/1‑150 (MQ=255)
                                                                                                                    ccAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTCGCGGGTAAACCCGCGCCTACAGCGGCCTGTGc                                   >  1:2183911/1‑150 (MQ=255)
                                                                                                                    ccAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTCGCGGGTAAACCCGCGCCTACAGCGGCCTGTGc                                   <  2:4466213/150‑1 (MQ=255)
                                                                                                                      aaTCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTCGCGGGTAAACCCGCGCCTACAGCGGCCTGTGCAt                                 <  1:2469401/150‑1 (MQ=255)
                                                                                                                         cACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTCGCGGGTAAACCCGCGCCTACAGCGGCCTGTGCATGTc                              >  1:3737210/1‑150 (MQ=255)
                                                                                                                         cACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTCGCGGGTAAACCCGCGCCTACAGCGGCCTGTGCATGTc                              <  1:1430715/150‑1 (MQ=255)
                                                                                                                          aCCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTCGCGGGTACACCCGCGCCTACAGCGGCCTGTGCATGTcc                             >  2:3899542/1‑150 (MQ=255)
                                                                                                                           ccAATGTGTATCCACCCCCACTCAGGTGTAGGAGCGGGTTTACCCTCGTTTACTGTCGGGGCGGCTACGGTGCTCGGCGGGTGGTCATTGGCCAGCGGGGCCGGACCATTCTCGGGTTCACCCGCGGCTCCTGCGGCCTGTGCATGTCCa                            <  2:3753154/150‑1 (MQ=21)
                                                                                                                           ccAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTCGCGGGTAAACCCGCGCCTACAGCGGCCTGTGCATGTCCa                            <  1:1030754/150‑1 (MQ=255)
                                                                                                                            cAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCATCGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTCGCGGGTAAACCCGCGCCTACAGCGGCCTGTGCATGTCCAg                           >  1:4462317/1‑150 (MQ=255)
                                                                                                                            cAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTCGCGGGTAAACCCGCGCCTACAGCGGCCTGTGCATGTCCAg                           <  1:169299/150‑1 (MQ=255)
                                                                                                                            cAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTCGCGGGTAAACCCGCGCCTACAGCGGCCTGTGCATGTCCAg                           >  1:3292952/1‑150 (MQ=255)
                                                                                                                                 tgtATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTCGCGGGTAAACCCGCGCCTACAGCGGCCTGTGCATGTCCAGTCAgg                      <  1:1055172/150‑1 (MQ=255)
                                                                                                                                      ccACCCCCACTCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTCGCGGGTAAACCCGCGCCTACAGCGGCCTGTGCATGTCCAGTCAGGCCGTa                 <  2:364355/150‑1 (MQ=255)
                                                                                                                                      ccACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTCGCGGGTAAACCCGCGCCTACAGCGGCCTGTGCATGTCCAGTCAGGCCGTa                 <  1:322216/150‑1 (MQ=255)
                                                                                                                                      ccACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTCGCGGGTAAACCCGCGCCTACAGCGGCCTGTGCATGTCCAGTCAGGCCGTa                 <  1:1528858/150‑1 (MQ=255)
                                                                                                                                       cACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCCGGGCCGGCCCATTCGCGGGTAAACCCGCGCCTACAGCGGCCTGTGCATGTCCAGTCAGGCCGTAg                <  1:1215729/150‑1 (MQ=255)
                                                                                                                                       cACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTCGCGGGTAAACCCGCGCCTACAGCGGCCTGTGCATGTCCAGTCAGGCCGTAg                >  2:4942352/1‑150 (MQ=255)
                                                                                                                                        aCCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACgg                                                                                                            >  1:114394/1‑57 (MQ=255)
                                                                                                                                        aCCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTcgcg                                                                <  2:1120050/101‑1 (MQ=255)
                                                                                                                                          ccccAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTCGCGGGTAACCCCGCGCCTACAGCGGCCTGTGCATGTCCAGTCAGGCCgctgtag             <  1:326803/150‑7 (MQ=255)
                                                                                                                                          ccccAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTCGCGGGTAAACCCGCGCCTACAGCGGCCTGTGCATGTCCAGTCAGGCCGTAgcgc             >  1:8136/1‑150 (MQ=255)
                                                                                                                                          ccccAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTCGCGGGTAAACCCGCGCCTACAGCGGCCTGTGCATGTCCAGTCAGGCCGTAgcgc             >  2:1004748/1‑150 (MQ=255)
                                                                                                                                           cccAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTCGCGGGTAAACCCGCGCCTACAGCGGCCTGTGCATGTCCAGTCAGGCCGTAGCGCt            >  1:1748755/1‑150 (MQ=255)
                                                                                                                                             cAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTCGCGGGTAAACCCGCGCCTACAGCGGCCTGTGCATGTCCAGTCAGGCCGTAGCGCTGa          <  2:5340328/150‑1 (MQ=255)
                                                                                                                                                tCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTCGCGGGTAAACCCGCGCCTACAGCGGCCTGTGCATGTCCAGTCAGGCCGTAGCGCTGACCa       <  1:5223257/150‑1 (MQ=255)
                                                                                                                                                    gtgtAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTCGCGGGTAAACCCGCGCCTACAGCGGCCTGTGCATGTCCAGTCAGGCCGTAGCGCTGACCATAcc   >  2:2124681/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
CCGAATGACCGCCATATCCTGGAACGTGCGGGCTTGTCCGCGAAGCAGACAACGCGGCGGATAGCACGGGCTTCGTCCGTGTTCGCGAGGAAACCCGCGCCTACGACGGCCTGCGCCCAATCACCAATGTGTATCCACCCCCAATCAGGTGTAGGAGCGGGTTTACCCGCGAATACGGTCGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCATTCGCGGGTAAACCCGCGCCTACAGCGGCCTGTGCATGTCCAGTCAGGCCGTAGCGCTGACCATACCT  >  NC_002947/4329621‑4329919

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.