New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5130084 =77 (0.320)15 (0.080) 6/222 NT 17.6% intergenic (+61/‑121) PP_4511/PP_4512 AraC family transcriptional regulator/DMT superfamily permease
?NC_002947 5130163 = 78 (0.400)intergenic (+140/‑42) PP_4511/PP_4512 AraC family transcriptional regulator/DMT superfamily permease

Only 100 of 179 total aligned reads displayed.

GATAACTGACAGCAGTCTTGCGACAGAATGTGTTTGCCTGAGGCTTTACACTTTGCCTTTGCCGGCCCCTTCGCGGGTAAACCCGCTCCTACAGGATGCCCCCGCCTGAATGTTGTGCAAAACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGTTCTTCGGCCTTACCGGCGTCTTCGGCAAACTGGCCACCAGCGCCAGCCCGGCGATCATCGT  >  NC_002947/5130015‑5130311
                                                                                                                                                    |                                                                                                                                                    
   aaCTGACAGCAGTCTTGCGACAGATTGTTTTTGCCTGTGGCTTTACACTTTGCCTTTGCGGGCCCCTTCGCGGGTAAACCCGCTCCTACAGGATGCCCCCGCCTGAATGTTGTGCAAAACCTTTAGGAGGGGGTTTACCCGCGAAAGGGc                                                                                                                                                  <  2:1270064/150‑1 (MQ=38)
     cTGACAGCGGTCTTGCGACAGATTGTTTTTGCCTGAGGCTTTACACTTTGCCTTTGCCGGCCCCTTCGCGGGTAAACCCGCTCCTACCGTATGCCCCCGCCTGATTTTTGTGCAAAACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCg                                                                                                                                                <  2:271599/150‑1 (MQ=38)
     cTGACAGCAGTCTTGCGACAGAATGTGTTTGCCTGAGGCTTTACACTTTGCCTTTGCCGGCCCCTTCGCGGGTAAACCCGCTCCTACAGGATGCCCCCGCCGGAATGTTGTGCAAAACCGGTAGGGGCGGGGTTACCCGCGGAAGGGCCg                                                                                                                                                >  2:2225885/1‑150 (MQ=39)
     cTGACAGCAGTCTTGCGACAGAAGTTGTTTGCCGGAGGCTTTACACTTTGCCTTTGCCGGCCCCTTCGCGGGTAAACCCGCTCCTACAGGAGGCCCCCGCCTGAATGTGGTGCAAACCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCg                                                                                                                                                <  2:735348/150‑1 (MQ=38)
      tGACAGCAGTCTTGCGACAGAATGTGTTTGCCTGAGGCTTTACACTTTGCCTTTGCCGGCCCCTTCGCGGGTGAAAACCCACCAACAGGAGGCCCCCCCCGGAAAGTTGTGGAAAAACTGGTGGAGCGGGTTTTACCCCGCAAGGGCCgg                                                                                                                                               >  1:3606102/1‑150 (MQ=255)
             agTCTTGCGACAGAATGTGTTTGCCTGAGGCTTTACACTTTGCCTTTGCCGGCCCCTTCGCGGGTAAAACCGCTCCTACACGATGCCCCCCCCGGAATGTTGTGCAAAACCGGTAGGAGCGGGGTTACCCGCGAAAGGGCCGGCCCTGcc                                                                                                                                        >  2:5006547/1‑150 (MQ=38)
              gTCTTGCGACAGAATGTGTTTGCCTGAGGCTTTACACTTTGCCTTTGCCGGCCCCTTCGCGGGTAAACCCGCTCCTACAGGATGCCCCCGCCGGAATGTTGTGCAAAACCGGGAGGCGCGGGTTTACCCGCGAAAGGGCCGGCACTGccg                                                                                                                                       >  2:4578577/1‑149 (MQ=255)
               tCTTGCGACAGAATGTGTTTGCCTGAGGCTTTACACTTTGCCTTTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTAAACGCTGCCCCCCCCTGAATGTTGTGCAAAACCGGTAGGTGCGGGTTTACCCCCCAAAGGGCCGGCACAGccgg                                                                                                                                      >  2:3896566/1‑148 (MQ=255)
                      aCAGAATGTGTTTGCCTGAGGCTTTACACTTTGCCTTTGCCGGCCCCTTCGCGGGTAAAACCGCTCCTACAGGCTGCCCCCGCCGGAATGTTGTGCAAAACCTGTAGGAGCGGGTTTACCCGCGCAAGGGGCGGCCCTGCCGGTAGAGAt                                                                                                                               >  2:3034392/1‑150 (MQ=38)
                      aCAGAATGTGTTTGCCTGAGGCTTTACACTTTGCCTTTGCCGGCCCCTTCGCGGGTAAAACCGCTACTACAGGCTGCCCCCGCCTGAATGTTGTGCAAAACCTGTTGGCGCGGGGTTACCCGCGCAAGGGCCGGCCCTGCCTGgagagag                                                                                                                               >  2:3034362/1‑149 (MQ=255)
                       cAGAATGTGTTTGCCTGAGGCTTTACACTTTGCCTTTGCCGGCCCCTTCGCAGGTAAACCCGCTCCTACAGGATGCCCCCGCCTGAATGTTGTGCAAAACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGAtc                                                                                                                              <  2:5168143/150‑1 (MQ=255)
                        aGAATGTTTTTGGCCTATGCATTACCCTTTGGCTTTTCCGGCCCCCTCGGGGTTAAACCCGCCCCAAACGGTTGCCCCCGGCTTTATTTTGGTCAAAACCTTTAGGATGGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGAtct                                                                                                                             <  2:2524082/150‑1 (MQ=255)
                                      tgtggCTTTACACTTTGCTTTTGCGGGCCCCTTCGCGGGTATACCCGTTCCTACTGTATGCCGCCGCCTGTATTTTGTGCAAAACCTTTTGGTGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACcca                                                                                                               <  2:2256178/147‑1 (MQ=255)
                                          gCTTTAAAGTTTGGCTTTGCCGGCCCGTTCGCTGTTAAACCCGCTCCTCCTGGTTGCCCCCGCCTGATTTTTGTGAAAAACCTGTAGGTGGGGTTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCAt                                                                                                           <  1:2225885/150‑1 (MQ=255)
                                             ttACACTTTGCCTTTGCCGGCCCCTTCGCGGGTAAACCCGCTCCAACAGGATGCCCCCCCCAGAATGTTGTGCAAAACCTGGAGGAGCGGGTTTTCCCGCGAAAGGGCCCGCCCAGCCGGTAGAGATCTCCAACAAGGACCCACCAAGaa                                                                                                        >  2:3614610/1‑150 (MQ=37)
                                                cacTTTGCCTTTGCCGGCCCCTTCGCGGGTAAAACCGCTCCTACAGGATGCCCCCGCCTGAATGTTGTGCAAAACCGGTAGGAGCGGGTTTACCCCCGCAAGGGCCGGCACAGCCGGTAGAGATCTCCATCAAGGACCCACCAAGAaaca                                                                                                     >  2:4034798/1‑150 (MQ=255)
                                                     tgcctttgccGGCCCCTTCGCGGGTAAACCCGCTCCTACAGGTTGCCCCCGCATGAATTTTGTGCAAAACCTGTAGGTGCGGTTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACcaccgca                                                                                                <  2:1157396/150‑1 (MQ=38)
                                                        ctttgccGGCCCCTTCGCGGGTAAACCCGCTCCTACCGGCTGCCCCCGCCTGAATGTTGTGCAAAACCGGTAGGAGCGGGGTTACCCGCGCAAGGGCCGGCACTGCCGGTAGAGGTCTCCATCAAGGACCCACCATGAAccaccccaccc                                                                                             >  2:4538847/1‑149 (MQ=38)
                                                         tttgccGGCCCCTTCGCGGGTAAACCCGCTCCTACAGGATGCCCCCGCCTGCATGTTGTGCAAAACCTGTAGGAGCGGGTTTAACCGCGAAAGGGCCGGCACGGCCAGTAGAGATCTCCATCCAGGACCCACCAAGAACCaccgcaccgc                                                                                            >  2:5051221/1‑150 (MQ=38)
                                                              cGGCCCCTTCGCGGGTAAAACCCCTCCAACAGGATGCCCCCCCCTGAATGTTGTGCAAAACCGGTAGGAGCCGGTTTACCCCCGAAAGGGCCGGCACTGCCGGTAGATATAACCATAAAGGAACCACCAAGAACCACCCCACCGCCCACg                                                                                       >  2:4985131/1‑150 (MQ=255)
                                                              cGGCCCCTGCGCGGGAAAACCCGCTCCTCCAGGTTGCCCCCGCCTGAATGTTGTGCAAAACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCg                                                                                       <  2:2934794/150‑1 (MQ=255)
                                                               ggCCCCTTCGCGGGTAAACCCGCTCCTACAGGATGCCCCCGCCTGAATGTTGTGCAAAACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCgg                                                                                      <  2:3906836/150‑1 (MQ=255)
                                                                   ccTTCGCGGGTAAAACCGCTACTAAAGGATGCCCCCGCCTGTATGTTGTGCAAAAGCTGTATGATCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGATATGTCCATCAATGACCCACCATGAAACACCGCACCGCCCTGGGCGCa                                                                                  >  2:2302173/1‑150 (MQ=255)
                                                                    cTTCGCGGGTAAACCCGCTCCTACAGGATGCCCCCGCCTGAATGTTGTGCAAAAACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCAc                                                                                 >  2:770638/1‑150 (MQ=255)
                                                                    cTTCGCGGGTAAACCCGCACCTACAGGATGCCCCCGCCTGAATGTTGTGCAAAACCGGGAGGAGCGGGGTTACCCGCGAAAGGGCCGGCACAGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCAc                                                                                 >  2:1923238/1‑150 (MQ=255)
                                                                      TCGCGGTTAACCCCGCTCCTACAGGATGCCCCCGCCTGATTGTTGTGCAAATCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTg                                                                               >  2:2859451‑M1/1‑150 (MQ=255)
                                                                        GCGGGTAAACCCGCTCCTACAGGATGCCCCCGCCTGAATGTTGTGCAAAACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGca                                                                             <  2:4975206‑M1/150‑1 (MQ=255)
                                                                           GGTAAACCCGCTCCTACAGGATGCCCCCGCCTGAATGTTGTGCAAAACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACAt                                                                          <  1:2601210‑M1/150‑1 (MQ=255)
                                                                              AAACCCGCTCCTACAGGATGCCCCCGCCTGAATGTTGTGCAAAACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTgg                                                                       <  2:2099522‑M1/150‑1 (MQ=255)
                                                                              AAACCCGCTCCTACAGGATGCCCCCGCCTGAATGTTGTGCAAAACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTgg                                                                       <  1:1406527‑M1/150‑1 (MQ=255)
                                                                              AAACCCGCTCCTACAGGATGCCCCCGCCTGAATGTTGTGCAAAACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTgg                                                                       <  1:4864872‑M1/150‑1 (MQ=255)
                                                                              AAACCCGCTCCTACAGGATGACCCCGCCTGAATGTTGTGCAAAACCGGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTgg                                                                       <  1:1285769‑M1/150‑1 (MQ=255)
                                                                                ACCCGCTCCTACAGGATGCCCCCGCCTGAATGTTGTGCAAAACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGgcg                                                                     <  1:4923500‑M1/150‑1 (MQ=255)
                                                                                ACCCGCTCCTACAGGATGCCCCCGCCTGAATGTTGTGCAAAACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGgcg                                                                     <  1:3709844‑M1/150‑1 (MQ=255)
                                                                                ACCCGCTCCTACAGGATGCCCCCGCCTGAATGTTGTGCAAAACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGgcg                                                                     <  2:1650303‑M1/150‑1 (MQ=255)
                                                                                 CCCGCTCCTACAGGATGCCCCCGCCTGAATGTTGTGCAAAACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGgcgc                                                                    <  2:4796004‑M1/150‑1 (MQ=255)
                                                                                  ccgctcctacaggttttgcacaacattcaggcgggggcatcctgtaggagcgggtttacccgcgaaGGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGTACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGgcgcg                                                                   >  1:51866‑M2/67‑150 (MQ=255)
                                                                                  ccgctcctacaggttttgcacaacattcaggcgggggcatcctgtaggagcgggtttacccgcgaaGGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGgcgcg                                                                   >  1:3345230‑M2/67‑150 (MQ=255)
                                                                                  ccgctcctacaggttttgcacaacattcaggcgggggcatcctgtaggagcgggtttacccgcgaaAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGgcgcg                                                                   >  2:546633‑M2/67‑150 (MQ=255)
                                                                                  CCGCTCCTACAGGATGCCCCCGCCTGAATGTTGTGCAAAACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCCTCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACCTTGgcgcg                                                                   <  2:1890744‑M1/150‑1 (MQ=255)
                                                                                  CCGCTCCTACAGGATGCCCCCGCCTGAATGTTGTGCAAAACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGgc                                                                                     <  1:2053634‑M1/132‑1 (MQ=255)
                                                                                  CCGCTCCTACAGGATGCCCCCGCCTGAATGTTGTGCAAAACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGgcgcg                                                                   <  1:2977939‑M1/150‑1 (MQ=255)
                                                                                  CCGCTCCTACAGGATGCCCCCGCCTGAATGTTGTGCAAAACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGgcgcg                                                                   <  1:1275418‑M1/150‑1 (MQ=255)
                                                                                  CCGCTCCTACAGGATGCCCCCGCCTGAATGTTGTGCAAAACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGgcgcg                                                                   <  1:4250469‑M1/150‑1 (MQ=255)
                                                                                  CCGCTCCTACAGGATGCCCCCGCCTGAATGTTGTGCAAAACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGCCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGgcgcg                                                                   <  1:2928265‑M1/150‑1 (MQ=255)
                                                                                  CCGCTCCGACAGGATGCCCCCGCCTGAATGTTGTGCAAAACCTGTAGGAGCGGGTTTCCCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGgcgcg                                                                   >  2:4465581‑M1/1‑150 (MQ=255)
                                                                                    gctcctacaggttttgcacaacattcaggcgggggcatcctgtaggagcgggtttacccgcgaaAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCt                                                                 >  1:2376481‑M2/65‑150 (MQ=255)
                                                                                    gctcctacaggttttgcacaacattcaggcgggggcatcctgtaggagcgggtttacccgcgaaAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCt                                                                 >  2:1769634‑M2/65‑150 (MQ=255)
                                                                                       CCTACAGGATGCCCCCGCCTGAATGTTGTGCAAAACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGtt                                                              <  2:4585343‑M1/150‑1 (MQ=255)
                                                                                        ctacaggttttgcacaacattcaggcgggggcatcctgtaggagcgggtttacccgcgaaAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGttc                                                             >  2:560769‑M2/61‑150 (MQ=255)
                                                                                        CTACAGGATGCCCCCGCCTGAATGTTGTGCAAAACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGttc                                                             <  1:1514462‑M1/150‑1 (MQ=255)
                                                                                         tacaggttttgcacaacattcaggcgggggcatcctgtaggagcgggtttacccgcgaaGGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGttct                                                            >  2:2481129‑M2/60‑150 (MQ=255)
                                                                                         tacaggttttgcacaacattcaggcgggggcatcctgtaggagcgggtttacccgcgaaGGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGttct                                                            >  1:371737‑M2/60‑150 (MQ=255)
                                                                                         TACAGGATGCCCCCGCCTGAATGTTGTGCAAAACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGttct                                                            <  1:925010‑M1/150‑1 (MQ=255)
                                                                                          acaggttttgcacaacattcaggcgggggcatcctgtaggagcgggtttacccgcgaaAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGgcg                                                                                    >  1:4634215‑M2/59‑125 (MQ=255)
                                                                                          acaggttttgcacaacattcaggcgggggcatcctgtaggagcgggtttacccgcgaaAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACt                                                                                >  2:2188850‑M2/59‑129 (MQ=255)
                                                                                          acaggttttgcacaacattcaggcgggggcatcctgtaggagcgggtttacccgcgaaAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACt                                                                                <  1:2188850‑M2/71‑1 (MQ=255)
                                                                                          ACAGGATGCCCCCGCCTGAATGTTGTGCAAAACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGttctt                                                           <  1:1374958‑M1/150‑1 (MQ=255)
                                                                                          ACAGGATGCCCCCGCCTGAATGTTGTGCAAAACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGttctt                                                           <  1:3831481‑M1/150‑1 (MQ=255)
                                                                                           CAGGATGCCCCCGCCTGAATGTTGTGCAAAACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGttcttc                                                          >  1:5030661‑M1/1‑150 (MQ=255)
                                                                                              gttGCCCCCGCCTTTTTGTTGTGCAAAACCTGTTGGTGGGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGTTCTTCGGc                                                       <  1:3614610/148‑1 (MQ=255)
                                                                                              GATGCCCCCGCCTGATTGTGGGGCAAACCCTGTCGGGGGGGGTTAACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGTTCTTCGGc                                                       >  1:3509723‑M1/1‑150 (MQ=255)
                                                                                              GATGCCCCCGCCTGAATGTTGTGCAAAACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGTTCTTCGGc                                                       <  1:865824‑M1/150‑1 (MQ=255)
                                                                                               aTGCCCCCGCCTGAATGTTGTGCAAAACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGTTCTTCGGcc                                                      <  1:4796004/150‑1 (MQ=255)
                                                                                                  cccccGCCTGAATGTTGTGCAAAACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGTTCTTCGGCCTTa                                                   >  2:3570839/1‑150 (MQ=255)
                                                                                                   ccccGCCTGAATGTTGTGCAAAACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGTTCTTCGGCCTTAc                                                  >  2:868457/1‑150 (MQ=255)
                                                                                                   ccccGCCTGAATGTTGTGCAAAACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGTTCTTCGGCCTTAc                                                  >  1:803695/1‑150 (MQ=255)
                                                                                                    cccGCCTGAATGTTGTGCAAAACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGTTCTTCGGCCTTAcc                                                 >  2:484871/1‑150 (MQ=255)
                                                                                                     ccGCCTGAATGTTGTGCAAAACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGTTCTTCGGCCTTACCg                                                >  2:5423220/1‑150 (MQ=255)
                                                                                                       gCCTGAATGTTGTGCAAAACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGTTCTTCGGCCTTACCGGc                                              <  2:3831481/150‑1 (MQ=255)
                                                                                                           gAATGTTGTGCAAAACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGTTCTTCGGCCTTACCGGCGTCt                                          >  2:3398423/1‑150 (MQ=255)
                                                                                                            aaTGTTGTGCAAAACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGTTCTTCGGCCTTACCGGCGTCtt                                         >  2:551649/1‑150 (MQ=255)
                                                                                                            aaTGTTGTGCAAAACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGTTCTTCGGCCTTACCGGCGTCtt                                         >  1:5396955/1‑150 (MQ=255)
                                                                                                              tgttgtGCAAAACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGTTCTTCGGCCTTACCGGCGTCTTCg                                       >  1:4994374/1‑150 (MQ=255)
                                                                                                              tgttgtGCAAAACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGTTCTTCGGCCTTACCGGCGTCTTCg                                       >  1:4994436/1‑150 (MQ=255)
                                                                                                               tttgtCCAAAACCTGTAGGAGGGGTTTAACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGTTCTTCGGCCTTACCGGCGTCTTCgg                                      <  1:3791325/149‑1 (MQ=255)
                                                                                                                ttgtGCAAAACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGTTCTTCGGCCTTACCGGCGTCTTCGGc                                     >  1:3929515/1‑150 (MQ=255)
                                                                                                                ttgtGCAAAACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGTTCTTCGGCCTTACCGGCGTCTTCGGc                                     >  1:2403722/1‑150 (MQ=255)
                                                                                                                   tgCAAAACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGTTCTTCGGCCTTACCGGCGTCTTCGGCaaa                                  >  1:765641/1‑150 (MQ=255)
                                                                                                                    gCAAAACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGTTCTTCGGCCTTACCGGCGTCTTCGGCAAAc                                 >  2:3321466/1‑150 (MQ=255)
                                                                                                                    gCAAAACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGTTCTTCGGCCTTACCGGCGTCTTCGGCAAAc                                 >  2:1479309/1‑150 (MQ=255)
                                                                                                                     cAAAACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGTTCTTCGGCCTTACCGGCGTCTTCGGCAAACt                                >  2:4156905/1‑150 (MQ=255)
                                                                                                                      aaaaCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGa                                                                                                         <  2:4660736/76‑1 (MQ=255)
                                                                                                                      aaaaCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGa                                                                                                         >  1:4660736/1‑76 (MQ=255)
                                                                                                                      aaaaCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGTTCTTCGGCCTTACCGGCGTCTTCGGCAAACTg                               >  2:4368029/1‑150 (MQ=255)
                                                                                                                      aaaaCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGTTCTTCGGCCTTACCGGCGTCTTCGGCAAACTg                               <  2:4994374/150‑1 (MQ=255)
                                                                                                                            tgtaggagcgggtttacccgcgaaAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGTTCTTCGGCCTTACCGGCGTCTTCGGCAAACTGGccacc                         <  2:687954‑M2/126‑1 (MQ=255)
                                                                                                                                 gagcgggtttacccgcgaaGGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGTTCTTCGGCCTTACCGGCGTCTTCGGCAAACTGGCCACCAgcgc                    >  2:3673073‑M2/20‑150 (MQ=255)
                                                                                                                                  agcgggtttacccgcgaaAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGTTCTTCGGCCTTACCGGCGTCTTCGGCAAACTGGCCACCAGCGcc                   >  1:3840996‑M2/19‑150 (MQ=255)
                                                                                                                                   gcgggtttacccgcgaaAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGTTCTTCGGCCTTACCGGCGTCTTCGGCAAACTGGCCACCAGCGCCa                  >  2:319953‑M2/18‑150 (MQ=255)
                                                                                                                                    cgggtttacccgcgaaAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGTTCTTCGGCCTTACCGGCGTCTTCGGCAAACTGGCCACCAGCGCCAg                 >  1:5285567‑M2/17‑150 (MQ=255)
                                                                                                                                     gggtttacccgcgaaAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGTTCTTCGGCCTTACCGGCGTCTTCGGCAAACTGGCCACCAGCGCCAGc                <  1:551649‑M2/135‑1 (MQ=255)
                                                                                                                                       gtttacccgcgaaAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGTTCTTCGGCCTTACCGGCGTCTTCGGCAAACTGGCCACCAGCGCCAGccc              >  2:4278477‑M2/14‑150 (MQ=255)
                                                                                                                                       gtttacccgcgaaAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGTTCTTCGGCCTTACCGGCGTCTTCGGCAAACTGGCCACCAGCGCCAGccc              <  2:5280630‑M2/137‑1 (MQ=255)
                                                                                                                                         ttacccgcgaaAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGTTCTTCGGCCTTACCGGCGTCTTCGGCAAACTGGCCACCAGCGCCAGCCCgg            <  1:319953‑M2/139‑1 (MQ=255)
                                                                                                                                             ccgcgaaAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGTTCTTCGGCCTTACCGGCGTCTTCGGCAAACTGGCCACCAGCGCCAGCCCGGCGat        >  1:2826930‑M2/8‑150 (MQ=255)
                                                                                                                                             ccgcgaaAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGTTCTTCGGCCTTACCGGCGTCTTCGGCAAACTGGCCACCAGCGCCAGCCCGGCGat        >  1:1350760‑M2/8‑150 (MQ=255)
                                                                                                                                             ccgcgaaAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGTTCTTCGGCCTTACCGGCGTCTTCGGCAAACTGGCCACCAGCGCCAGCCCGGCGat        >  1:2720475‑M2/8‑150 (MQ=255)
                                                                                                                                               gcgaaAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGTTCTTCGGCCTTACCGGCGTCTTCGGCAAACTGGCCACCAGCGCCAGCCCGGCGatca      >  2:4229653‑M2/6‑150 (MQ=255)
                                                                                                                                                 gaaGGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGTTCTTCGGCCTTACCGGCGTCTTCGGCAAACTGGCCACCAGCGCCAGCCCGGCGatcatc    <  2:371737‑M2/147‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
GATAACTGACAGCAGTCTTGCGACAGAATGTGTTTGCCTGAGGCTTTACACTTTGCCTTTGCCGGCCCCTTCGCGGGTAAACCCGCTCCTACAGGATGCCCCCGCCTGAATGTTGTGCAAAACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCTGTAGAGATCTCCATCAAGGACCCACCATGAACCACCGCACCGCCCTCGGCGCACTGCACATTGGCGCGCTGTTCTTCGGCCTTACCGGCGTCTTCGGCAAACTGGCCACCAGCGCCAGCCCGGCGATCATCGT  >  NC_002947/5130015‑5130311

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.