| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2238884 = | 83 (0.420) | 9 (0.050) | 5/244 | NT | 11.7% | intergenic (+14/+114) | uvrB/PP_1975 | uvrABC excinuclease protein B/EmrB/QacA family drug resistance transporter |
| ? | NC_002947 | 2238975 = | 63 (0.360) | intergenic (+105/+23) | uvrB/PP_1975 | uvrABC excinuclease protein B/EmrB/QacA family drug resistance transporter | |||||
TGCTGACCCGCAAGTTGCCGGAAGGGTTGAAGGCTGGGGAAGCCCATTGAGGCTATTACAGATCAGATGCGGTCCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGGCACGCCCGCTCCCACAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2239047‑2238884‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccacagggACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACCGCCACCATGCTCACCGCCAACCCGATCCCGACAAAGTGGAAGGCATCGTTGTAAGCCATGATCAGCGCCTG > NC_002947/2238975‑2239123 TGCTGACCCGCAAGTTGCCGGAAGGGTTGAAGGCTGGGGAAGCCCATTGAGGCTATTACAGATCAGATGCGGTCCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGGCACGC > 1:2942609/1‑150TGCTGACCCGCAAGTTGCCGGAAGGGTTGAAGGCTGGGGAAGCCCATTGAGGCTATTACAGATCAGATGCGGTCCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGGCACGC < 2:3361192/150‑1 GACCCGCAAGTTGCCGGAAGGGTTGAAGGCTGGGGAAGCCCATTGAGGCTATTACAGATCAGATGCGGTCCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGGCACGCCCGC < 2:370609/150‑1 ACCCGCAAGTTGCCGGAAGGGTTGAAGGCTGGGGAAGCCCATTGAGGCTATTACAGATCAGATGCGGTCCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGGCACGCCCGCT < 1:481573/150‑1 CCGCAAGTTGCCGGAAGGGTTGAAGGCTGGGGAAGCCCATTGAGGCTATTACAGATCAGATGCGGTCCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGGCACGCCCGCTCC > 2:1278226/1‑150 CCGCAAGTTGCCGGAAGGGTTGAAGGCTGGGGAAGCCCATTGAGGCTATTACAGATCAGATGCGGTCCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGGCACGCCCGCTCC > 2:1059762/1‑150 ccGTTGCCGGAAGGGTTGAAGGCTGGGGAAGCCCATTGAGGCTATTACAGAGCAGATGCGGTCCCTGTGGGAGCGGGCAGGCCCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGGCACGCCCGCTCCCACA < 1:2456869/148‑1 AAGTTGCCGGAAGGGTTGAAGGCTGGGGAAGCCCATTGAGGCTATTACAGATCAGATGCGGTCCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGGCACGCCCGCTCCCACA < 2:1173907/150‑1 gtgGCCGGAAGGGTTGAAGGCTGGGGAAGCCCATTGAGGCTATTACAGCTCAGATGCGGTCCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGGCACGCCCGCTCCCACAGG < 1:2609829/147‑1 GTTGCCGGAAGGGTTGAAGGCTGGGGAAGCCCATTGAGGCTATTACAGATCAGATGCGGTCCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGGCACGCCCGCTCCCACAGG < 2:3821052/150‑1 GTTGCCGGAAGGGTTGAAGGCTGGGGAAGCCCATTGAGGCTATTACAGATCAGATGCGGTCCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGGCACGCCCGCTCCCACAGG < 2:3002344/150‑1 gTGCCGGAAGGGTTGATGGCTGGGGAAGCCCATTGAGGCTATTACAGATCAGATGCGGTCCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGGCACGCCCGCTCCCACAGGG < 2:1600316/149‑1 GTCCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCGCAGCCGGTGCCCGCCACCGCGTTGAATTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGC > 1:1852062/1‑150 GCATGCCCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGGCACGCCCGCTCCCACAGGGCCCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCA > 1:1002266/1‑150 GCATGCCCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCA > 1:205772/1‑150 CCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACCG > 2:3684425/1‑150 CCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACCG > 2:1098117/1‑150 CCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACCG > 2:4047530/1‑150 CCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACCG > 1:3263791/1‑150 GCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACCGCC > 2:3426242/1‑150 CCACCGCGTTGAATTCTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACCGCCACCATGCTCACCGCCAACCCGATCCC < 1:3426242/150‑1 CCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACCGCCACCATGCTCACCGCCAACCCGATCCCGACAAAGTGGAAGGCATCGTTGTAAGCC > 2:3864323/1‑150 CCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACCGCCACCATGCTCACCGCCAACCCGATCCCGACAAAGTGGAAGGCATCGTTGTAAGCC > 2:3864331/1‑150 CCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACCGCCACCATGCTCACCGCCAACCCGATCCCGACAAAGTGGAAGGCATCGTTGTAAGCC > 2:3864396/1‑150 CCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACCGCCACCATGCTCACCGCCAACCCGATCCCGACAAAGTGGAAGGCATCGTTGTAAGCC > 2:1272231/1‑150 CCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACCGCCACCATGCTCACCGCCAACCCGATCCCGACAAAGTGGAAGGCATCGTTGTAAGCCA > 1:1948977/1‑150 CCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACCGCCACCATGCTCACCGCCAACCCGATCCCGACAAAGTGGAAGGCATCGTTGTAAGCCA < 1:3050719/150‑1 CCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACCGCCACCATGCTCACCGCCAACCCGATCCCGACAAAGTGGAAGGCATCGTTGTAAGCCA < 1:3051082/150‑1 CCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACCGCCACCATGCTCACCGCCAACCCGATCCCGACAAAGTGGAAGGCATCGTTGTAAGCCA < 1:3153109/150‑1 CCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACCGCCACCATGCTCACCGCCAACCCGATCCCGACAAAGTGGAAGGCATCGTTGTAAGCCA < 1:3153233/150‑1 CCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACCGCCACCATGCTCACCGCCAACCCGATCCCGACAAAGTGGAAGGCATCGTTGTAAGCCA < 1:884757/150‑1 CCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACCGCCACCATGCTCACCGCCAACCCGATCCCGACAAAGTGGAAGGCATCGTTGTAAGCCA > 1:670297/1‑150 CTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACCGCCACCATGCTCACCGCCAACCCGATCCCGACAAAGTGGAAGGCATCGTTGTAAGCCATGA < 2:2406127/150‑1 CCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACCGCCACCATGCTCACCGCCAACCCGATCCCGACAAAGTGGAAGGCATCGTTGTAAGCCATGATCA > 2:4035865/1‑150 CACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACCGCCACCATGCTCACCGCCAACCCGATCCCGACAAAGTGGAAGGCATCGTTGTAAGCCATGATCAG < 2:15569/150‑1 ACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACCGCCACCATGCTCACCGCCAACCCGATCCCGACAAAGTGGAAGGCATCGTTGTAAGCCATGATCAGC > 1:1565161/1‑150 ACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACCGCCACCATGCTCACCGCCAACCCGATCCCGACAAAGTGGAAGGCATCGTTGTAAGCCATGATCAGC > 1:637778/1‑150 GGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACCGCCACCATGCTCACCGCCAACCCGATCCCGACAAAGTGGAAGGCATCGTTGTAAGCCATGATCAGCGCC > 1:2384957/1‑150 GGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACCGCCACCATGCTCACCGCCAACCCGATCCCGACAAAGTGGAAGGCATCGTTGTAAGCCATGATCAGCGCC > 1:3340964/1‑150 GGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACCGCCACCATGCTCACCGCCAACCCGATCCCGACAAAGTGGAAGGCATCGTTGTAAGCCATGATCAGCGCCT < 1:2837849/150‑1 GGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACCGCCACCATGCTCACCGCCAACCCGATCCCGACAAAGTGGAAGGCATCGTTGTAAGCCATGATCAGCGCCT > 2:1257153/1‑150 GACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACCGCCACCATGCTCACCGCCAACCCGATCCCGACAAAGTGGAAGGCATCGTTGTAAGCCATGATCAGCGCCTG > 1:2016974/1‑150 GACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACCGCCACCATGCTCACCGCCAACCCGATCCCGACAAAGTGGAAGGCATCGTTGTAAGCCATGATCAGCGCCTG > 2:1858307/1‑150 GACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACCGCCACCATGCTCACCGCCAACCCGATCCCGACAAAGTGGAAGGCATCGTTGTAAGCCATGATCAGCGCCTG > 2:1858227/1‑150 TGCTGACCCGCAAGTTGCCGGAAGGGTTGAAGGCTGGGGAAGCCCATTGAGGCTATTACAGATCAGATGCGGTCCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGGCACGCCCGCTCCCACAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2239047‑2238884‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccacagggACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACCGCCACCATGCTCACCGCCAACCCGATCCCGACAAAGTGGAAGGCATCGTTGTAAGCCATGATCAGCGCCTG > NC_002947/2238975‑2239123 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |