| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4162818 | 202 (1.030) | 11 (0.060) | 9/262 | NT | 5.3% | coding (1205/1302 nt) | PP_3663 | GGDEF domain‑containing protein |
| ? | NC_002947 | = 4162841 | 198 (1.060) | coding (1182/1302 nt) | PP_3663 | GGDEF domain‑containing protein | |||||
GTCTGTACGGATCACCCACATGGGTTACATGAAAGCTCCCCCACCTAGGTGACTCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4162664‑4162818‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgatca‑‑GCCGCCGGCGAGCCTGGCGGC‑GTTGATCGAGCAGGGGGATGTGGCGTTGTACCAGTCCAAACGTGGGGGGCGCGACAGCATTCGGTTTTTCGAGCGGGCGGTGGTTGAACTCCGGCAGTGAGCGAGTCACCTAGGTGGGGGAGCTTTCA < NC_002947/4162841‑4162693 GTCTGTACGGATCACCCACATGGGTTACATGAAAGCTCCCCCACCTAGGTGACTCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTC < 2:3924161/150‑1GTCTGTACGGATCACCCACATGGGTTACATGAAAGCTCCCCCACCTAGGTGACTCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTC > 1:2459979/1‑150GTCTGTACGGATCACCCACATGGGTTACATGAAAGCTCCCCCACCTAGGTGACTCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTC > 1:142909/1‑150 TCTGTACGGATCACCCACATGGGTTACATGAAAGCTCCCCCACCTAGGTGACTCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCG > 1:1495182/1‑150 TCTGTACGGATCACCCACATGGGTTACATGAAAGCTCCCCCACCTAGGTGACTCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCG > 2:703737/1‑150 CTGTACGGATCACCCACATGGGTTACATGAAAGCTCCCCCACCTAGGTGACTCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGA < 2:4149426/150‑1 CATGAACGCTCCCCCACCTAGGTGACTCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCGGCGAGCCTGGCGG < 1:274119/150‑1 AAAGCTCCCCCACCTAGGTGACTCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCGGCGAGCCTGGCGGC‑GTT < 1:1544658/150‑1 AAAGCTCCCCCACCTAGGTGACTCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCA‑‑GCCGCCGGCGAGCCTGGCGGC‑GTTGA < 1:52179/150‑1 AGCTCCCCCACCTAGGTGACTCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCA‑‑GCCGCCGGCGAGCCTGGCGGC‑GTTGATC < 1:4127507/150‑1 CCCCACCTAGGTGACTCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGTTCGATCA‑‑GCCGCCGGCGAGCCTGGCGGC‑GTTGATCGAGCA < 1:3142783/150‑1 CCCACCTAGGTGACTCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCA‑‑GCCGCCGGCGAGCCTGGCGGC‑GTTGATCGAGCAG < 1:3530977/150‑1 cCGCTCACTGCCGGAGTTCAACCCCCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACTTTTGGACTGGTACACCGCCACAGCCCCCGGCACGATCA‑‑GCCGCCGGCGAGCCTGCCGGC‑GTTGATCGAGCAGGGGGATGTGGCGTT < 1:778321/149‑1 TCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCA‑‑GCCGCCGGCGAGCCTGGCGGC‑GTTGA < 1:3859151/128‑1 TCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCA‑‑GCCGCCGGCGAGCCTGGCGGC‑GTTGA > 2:3859151/1‑128 CCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCA‑‑‑ACGCCGCCAGGCTCGCCGGCGGCTGATCGAACAGGGGGATGTGGCGTTGTACCAGTCCAAACGTGGGGGGCGCGACAGCATTCGGTTTTTCGAGCGGGCGGTGGTT > 2:854156/1‑150 AACGCCACATCCCCCTGCTCGATCA‑‑‑ACGCCGCCAGGCTCGCCGGCGGCTGATCGAGCAGGGGGAGGTGGCGTTGTACCAGTCCAAACGTGGGGGGCGCGACAGCATTCGGTTTTTCGAGCGGGCGGTGGTTGAACTCCGGCAGTGAGCGA > 1:3509762/1‑150 CGATCA‑‑GCCGCCGGCGAGCCTGGCGGC‑GTTGATCGAGCAGGGGGATGTGGCGTTGTACCAGTCCAAACGTGGGGGGCGCGACAGCATTCGGTTTTTCGAGCGGGCGGTGGTTGAACTCCGGCAGTGAGCGAGTCACCTAGGTGGGGGAGC > 1:2210361/1‑150 GATCA‑‑GCCGCCGGCGAGCCTGGCGGC‑GTTGATCGAGCAGGGGGATGTGGCGTTGTACCAGTCCAAACGTGGGGGGCGCGACAGCATTCGGTTTTTCGAGCGGGCGGTGGTTGAACTCCGGCAGTGAGCGAGTCACCTAGGTGGGGGTGCT > 2:100376/1‑150 GATCA‑‑GCCGCCGGCGAGCCTGGCGGC‑GTTGATCGAGCAGGGGGATGTGGCGTTGTACCAGTCCAAACGTGGGGGGCGCGACAGCATTCGGTTTTTCGAGCGGGCGGTGGTTGAACTCCGGCAGTGAGCGAGTCACCTAGGTGGGGGAGCT < 2:3111064/150‑1 GATCA‑‑GCCGCCGGCGAGCCTGGCGGC‑GTTGATCGAGCAGGGGGATGTGGCGTTGTACCAGTCCAAACGTGGGGGGCGCGACAGCATTCGGTTTTTCGAGCGGGCGGTGGTTGAACTCCGGCAGTGAGCGAGTCACCTAGGTGGGGGAGCT > 2:2971931/1‑150 GATCA‑‑GCCGCCGGCGAGCCTGGCGGC‑GTTGATCGAGCAGGGGGATGTGGCGTTGTACCAGTCCAAACGTGGGGGGCGCGACAGCATTCGGTTTTTCGAGCGGGCGGTGGTTGAACTCCGGCAGTGAGCGAGTCACCTAGGTGGGGGAGCT > 1:697953/1‑150 GATCA‑‑GCCGCCGGCGAGCCTGGCGGC‑GTTGATCGAGCAGGGGGATGTGGCGTTGTACCAGTCCAAACGTGGGGGGCGCGACAGCATTCGGTTTTTCGAGCGGGCGGTGGTTGAACTCCGGCAGTGAGCGAGTCACCTAGGTGGGGGAGCT < 1:4352070/150‑1 GATCA‑‑GCCGCCGGCGAGCCTGGCGGC‑GTTGATCGAGCAGGGGGATGTGGCGTTGTACCAGTCCAAACGTGGGGGGCGCGACAGCATTCGGTTTTTCGAGCGGGCGGTGGTTGAACTCCGGCAGTGAGCGAGTCACCTAGGTGGGGGAGCT > 1:3811480/1‑150 TCA‑‑ACCGCCGGCGAGCCTGGCGGC‑GTTGATCGAGCAGGGGGATGTGGCGTTGTACCAGTCCAAACGTGGGGGGCGCGACAGCATTCGGTTTTTCGAGCGGGCGGTGGTTGAACTCCGGCAGTGAGCGAGTCACCTAGGTGGGGGAGCTTT < 2:727172/150‑1 CA‑‑GCCGCCGGCGAGCCTGGCGGC‑GTTGATCGAGCAGGGGGATGTGGCGTTGTACCAGTCCAAACGTGGGGGGCGCGACAGCATTCGGTTTTTCGAGCGGGCGGTGGTTGAACTCCGGCAGTGAGCGAGTCACCTAGGTGGGGGAGCTTTC < 1:1701034/150‑1 CA‑‑GCCGCCGGCGAGCCTGGCGGC‑GTTGATCGAGCAGGGGGATGTGGCGTTGTACCAGTCCAAACGTGGGGGGCGCGACAGCATTCGGTTTTTCGAGCGGGCGGTGGTTGAACTCCGGCAGTGAGCGAGTCACCTAGGTGGGGGAGCTTTC < 2:1176999/150‑1 CA‑‑GCCGCCGGCGAGCCTGGCGGC‑GTTGATCGAGCAGGGGGATGTGGCGTTGTACCAGTCCAAACGTGGGGGGCGCGACAGCATTCGGTTTTTCGAGCGGGCGGTGGTTGAACTCCGGCAGTGAGCGAGTCACCTAGGTGGGGGAGCTTTC < 2:2216350/150‑1 CA‑‑GCCGCCGGCGAGCCTGGCGGC‑GTTGATCGAGCAGGGGGATGTGGCGTTGTACCAGTCCAAACGTGGGGGGCGCGACAGCATTCGGTTTTTCGAGCGGGCGGTGGTTGAACTCCGGCAGTGAGCGAGTCACCTAGGTGGGGGAGCTTTC < 1:3103782/150‑1 A‑‑GCCGCCGGCGAGCCTTGCGGC‑GTTGATCGAGCAGGGTGATGTGGCGTTGTACCAGTCCAAACGTGGGGGGCGCGACAGCAGTCGGTTGTTCGAGCGGGCGGTGGTTGAACTCCGGCAGTGAGCGAGTCACCTAGGTGGGGGAGCGTTCA > 2:4068519/1‑150 A‑‑GCCGCCGGCGAGCCTGGCGGC‑GTTGATCGAGCAGGGGGATGTGGCGTTGTACCAGTCCAAACGTGGGGGGCGCGACAGCATTCGGTTTTTCGAGCGGGCGGTGGTTGAACTCCGGCAGTGAGCGAGTCACCTAGGTGGGGGAGCTTTCA > 1:2363128/1‑150 A‑‑GCCGCCGGCGAGCCTGGCGGC‑GTTGATCGAGCAGGGGGATGTGGCGTTGTACCAGTCCAAACGTGGGGGGCGCGACAGCATTCGGTTTTTCGAGCGGGCGGTGGTTGAACTCCGGCAGTGAGCGAGTCACCTAGGTGGGGGAGCTTTCA < 1:683977/150‑1 A‑‑GCCGCCGGCGAGCCTGGCGGC‑GTTGATCGAGCAGGGGGATGTGGCGTTGTACCAGTCCAAACGTGGGGGGCGCGACAGCATTCGGTTTTTCGAGCGGGCGGTGGTTGAACTCCGGCAGTGAGCGAGTCACCTAGGTGGGGGAGCTTTCA < 1:3260030/150‑1 A‑‑GCCGCCGGCGAGCCTGGCGGC‑GTTGATCGAGCAGGGGGATGTGGCGTTGTACCAGTCCAAACGTGGGGGGCACGACAGCATTCGGTTTTTCGAGCGGGCGGTGGTTGAACTCCGGCAGTGAGCGAGTCACCTAGGTGGGGGAGCTTTCA < 2:1613102/150‑1 A‑‑GCCGCCGGCGAGCCTGGCGGC‑GTTGATCGAGCAGGGGGATGTGGCGTTGTACCAGTCCAAACGGGGGGGGCGCGACAGCATTCGGTTTTTCGAGCGGGCGGTGGTTGAACTCCGGCAGTGAGCGAGTCACCTAGGTGGGGGAGCTTTCA > 2:3453161/1‑150 GTCTGTACGGATCACCCACATGGGTTACATGAAAGCTCCCCCACCTAGGTGACTCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4162664‑4162818‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgatca‑‑GCCGCCGGCGAGCCTGGCGGC‑GTTGATCGAGCAGGGGGATGTGGCGTTGTACCAGTCCAAACGTGGGGGGCGCGACAGCATTCGGTTTTTCGAGCGGGCGGTGGTTGAACTCCGGCAGTGAGCGAGTCACCTAGGTGGGGGAGCTTTCA < NC_002947/4162841‑4162693 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |