| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4579766 = | 158 (0.800) | 16 (0.080) | 9/266 | NT | 9.8% | intergenic (+9/+100) | PP_4057/glgB | membrane protein/1,4‑alpha‑glucan branching enzyme |
| ? | NC_002947 | 4579851 = | 143 (0.750) | intergenic (+94/+15) | PP_4057/glgB | membrane protein/1,4‑alpha‑glucan branching enzyme | |||||
CGCTGGCCCTGAACCTGCCGCCGTTGGGGGTGTTGATCATGAAGCCCGCCTGATCGGTTGGCTGTACTGGCCCTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4579918‑4579766‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggccAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGTGGCTGGCCACTTCGTCACTGGCCACCGCCCCGAGATTGCCGACATTCGACCCGGCATACAGCTCGG > NC_002947/4579851‑4579999 CGCTGGCCCTGAACCTGCCGCCGTTGGGGGTGTTGATCATGAAGCCCGCCTGATCGGTTGGCTGTACTGGCCCTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGG < 2:4140858/150‑1CGCTGGCCCTGAACCTGCCGCCGTTGGGGGTGTTGATCATGAAGCCCGCCTGATCGGTTGGCTGTACTGGCCCTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGG < 2:1869182/150‑1 GCTGGCCCTGAACCTGCCGCCGTTGGGGGTGTTGATCATGAAGCCCGCCTGATCGGTTGGCTGTACTGGCCCTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGG < 2:795246/150‑1 GCTGGCCCTGAACCTGCCGCCGTTGGGGGTGTTGATCATGAAGCCCGCCTGATCGGTTGGCTGTACTGGCCCTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGG < 2:613657/150‑1 GCTGGCCCTGAACCTGCCGCCGTTGGGGGTGTTGATCATGAAGCCCGCCTGATCGGTTGGCTGTACTGGCCCTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGG < 2:2341411/150‑1 TGGCCCTGAACCTGCCGCCGTTGGGGGTGTTGATCATGAAGCCCGCCTGATCGGTTGGCTGTACTGGCCCTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTCT‑CCCGCGAAAGGGCCA < 2:4267997/150‑1 TGGCCCTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCC > 2:445101/1‑150 TGGCCCTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCC > 1:4510906/1‑150 TGGCCCTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCC > 1:1172491/1‑150 GCCCTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAG > 2:1636324/1‑150 GCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTCT‑CCCGCGAAAGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGG > 2:2217937/1‑150 GGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCT < 1:1636324/150‑1 CCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCG > 2:2934257/1‑150 caGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGCCGGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACACCCAACGGCGGAAGGTTCAGGGCCAGCGATAATGGCTGCCCGT > 2:3033861/3‑150 CCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGCCGGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGT > 2:2760664/1‑150 CCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGT > 2:418495/1‑150 CCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGT > 1:4395922/1‑150 CCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGT > 2:727074/1‑150 CCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAACGGGTCT‑CCCGCGAAAGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATG > 2:3910113/1‑140 CCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAACGGGTCT‑CCCGCGAAAGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATG < 1:3910113/140‑1 CGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGCCGGCCCTGCCTACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGTGGCTGGCCA > 1:1832932/1‑150 GCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTCT‑CCCGCGAAAGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGTGGCTGGCCACT > 1:2626676/1‑150 GGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGTGGCTGGCCACTTCGTCACTGGCCACCGCCCCGAGATTGCCGACATTCGACCCGGCATACAGCT > 2:2814826/1‑150 GGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGTGGCTGGCCACTTCGTCACTGGCCACCGCCCCGAGATTGCCGACATTCGACCCGGCATACAGCT > 1:142729/1‑150 GCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGTGGCTGGCCACTTCGTCACTGGCCACCGCCCCGAGATTGCCGACATTCGACCCGGCATACAGCTC > 2:3050170/1‑150 CAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGTGGCTGGCCACTTCGTCACTGGCCACCGCCCCGAGATTGCCGACATTCGACCCGGCATACAGCTCGG > 1:1206265/1‑150 CGCTGGCCCTGAACCTGCCGCCGTTGGGGGTGTTGATCATGAAGCCCGCCTGATCGGTTGGCTGTACTGGCCCTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4579918‑4579766‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggccAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGTGGCTGGCCACTTCGTCACTGGCCACCGCCCCGAGATTGCCGACATTCGACCCGGCATACAGCTCGG > NC_002947/4579851‑4579999 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |