New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5290364 =61 (0.310)6 (0.040) 3/216 NT 10.5% intergenic (‑75/+109) PP_4660/mdaB LysR family transcriptional regulator/drug activity modulator B
?NC_002947 5290458 = 55 (0.360)intergenic (‑169/+15) PP_4660/mdaB LysR family transcriptional regulator/drug activity modulator B

Only 100 of 175 total aligned reads displayed.

GCTCGGCAGCAGCGGAAATCGAGCCGCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCA  >  NC_002947/5290214‑5290512
                                                                                                                                                      |                                                                                                                                                     
gCTCGGCAGCAGCGGAAATCGAGCCGCAGTCGATGACGGCGACGAATACCGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGG                                                                                                                                                       <  1:1358265‑M1/150‑1 (MQ=255)
 cTCGGCAGCAGCGGAAATCGAGCCGCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGG                                                                                                                                                       <  2:2471599‑M1/150‑1 (MQ=255)
 cTCGGCAGCAGCGGAAATCGAGCCGCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGG                                                                                                                                                       <  1:3808759‑M1/150‑1 (MQ=255)
 cTCGGCAGCAGCGGAAATCGAGCCGCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGG                                                                                                                                                       <  2:1088202‑M1/150‑1 (MQ=255)
   gccaaccagttcctgggcatgaccggcctgccgtccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggctgcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGc                                                                                                                                                     >  1:1531318‑M1/148‑150 (MQ=255)
   gccaaccagttcctgggcatgaccggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGc                                                                                                                                                     >  1:666215‑M1/148‑150 (MQ=255)
   cGGCAGCAGCGGAAATCGAGCCGCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGC                                                                                                                                                     <  1:1650338‑M1/150‑1 (MQ=255)
      aaccagttcctgggcatgaccggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCctc                                                                                                                                                  <  2:3035004‑M1/6‑1 (MQ=255)
      aaccagttcctgggcatgaccggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCctc                                                                                                                                                  <  2:1346400‑M1/6‑1 (MQ=255)
       agcagcGGAAATCGAGCCGCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCT                                                                                                                                                 >  2:2337424‑M1/1‑150 (MQ=255)
       agcagcGGAAATCGAGCCGCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCT                                                                                                                                                 >  2:2924387‑M1/1‑150 (MQ=255)
        ccagttcctgggcatgaccggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCtt                                                                                                                                                <  2:2741862‑M1/8‑1 (MQ=255)
          agttcctgggcatgaccggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTcg                                                                                                                                              >  2:1063693‑M1/141‑150 (MQ=255)
            ttcctgggcatgaccggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTcgcg                                                                                                                                            >  2:4375739‑M1/139‑150 (MQ=255)
            cGGAAATCGAGCCGCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCG                                                                                                                                            <  1:2253755‑M1/150‑1 (MQ=255)
            cGGAAATCGAGCCGCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCG                                                                                                                                            >  1:2777610‑M1/1‑150 (MQ=255)
             tcctgggcatgaccggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCgg                                                                                                                                           >  1:2435873‑M1/138‑150 (MQ=255)
             tcctgggcatgaccggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCgg                                                                                                                                           >  1:1662107‑M1/138‑150 (MQ=255)
             tcctgggcatgaccggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCgg                                                                                                                                           >  2:2278516‑M1/138‑150 (MQ=255)
             ggAAATCGAGCCGCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGG                                                                                                                                           <  1:1934452‑M1/150‑1 (MQ=255)
              gAAATCGAGCCGCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGG                                                                                                                                          <  1:2628867‑M1/150‑1 (MQ=255)
              cctgggcatgaccggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCggg                                                                                                                                          >  1:3486715‑M1/137‑150 (MQ=255)
               ctgggcatgaccggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGcgggg                                                                                                                                         <  1:2100908‑M1/15‑2 (MQ=255)
               ctgggcatgaccggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGc                                                                                                                                         >  2:416314‑M1/136‑150 (MQ=255)
                tgggcatgaccggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCt                                                                                                                                        >  2:3709809‑M1/135‑150 (MQ=255)
                tgggcatgaccggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCGTCGCGGgcg                                                                                                                                        <  1:3880444‑M1/16‑2 (MQ=255)
                aaTCGAGCCGCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCT                                                                                                                                        >  1:3126391‑M1/1‑150 (MQ=255)
                 aTCGAGCCGCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATACCCGCTTGTCGAGGCCAAGGCCAGCGGCGCCTGTATGGGCCTCGTCGCGGGCTT                                                                                                                                       <  2:450618‑M1/150‑1 (MQ=255)
                       gaccggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCGtgccccc                                                                                                                                 <  1:2127008‑M1/23‑3 (MQ=255)
                         gCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTC                                                                                                                               <  2:2858362‑M1/150‑1 (MQ=255)
                         gCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGAGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCAAGCCCGCga                                                                                                                               <  2:4372706‑M1/150‑3 (MQ=255)
                         ccggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCTTGCCCGCTc                                                                                                                               <  2:784166‑M1/25‑1 (MQ=255)
                         ccggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCTTGCCCGCTc                                                                                                                               >  2:1846592‑M1/126‑150 (MQ=255)
                         ccggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCAAGCCcgcga                                                                                                                               >  2:853724‑M1/126‑148 (MQ=255)
                          cggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCTTGCCCGCTcc                                                                                                                              >  2:1104595‑M1/125‑150 (MQ=255)
                          cggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCAAGCccgcgaa                                                                                                                              >  1:1403498‑M1/125‑147 (MQ=255)
                          cAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCC                                                                                                                              <  1:4131291‑M1/150‑1 (MQ=255)
                          cAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCAAGCCCGCgaa                                                                                                                              <  1:1333514‑M1/150‑4 (MQ=255)
                            gcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCTTGCCCGCTCCca                                                                                                                            <  2:3126391‑M1/28‑1 (MQ=255)
                            gcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCTTGCCCGCTCCca                                                                                                                            >  2:2679201‑M1/123‑150 (MQ=255)
                            gTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCAAGCCCGCgaaga                                                                                                                            <  2:1663580‑M1/150‑6 (MQ=255)
                                  gACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTa                                                                                                                      <  2:475225/150‑1 (MQ=255)
                                   aCGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTAc                                                                                                                     <  1:543537/150‑1 (MQ=255)
                                    cGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACt                                                                                                                    <  2:1999053/150‑1 (MQ=255)
                                       cgacgaATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCa                                                                                                                 <  1:434580/150‑1 (MQ=255)
                                         acgaATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGACTGTGGTTGGTCTGTGCAATGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAggtattacgca                                                                                                               <  2:4200920‑M1/150‑12 (MQ=255)
                                           gaATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCGTGCCCGCTCCCACAAGTACTGCAAAGt                                                                                                             >  2:2105241/1‑150 (MQ=255)
                                              tACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCt                                                                                                          >  2:2466490/1‑150 (MQ=255)
                                               aCCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCtt                                                                                                         <  2:2921223/150‑1 (MQ=255)
                                               aCCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCtt                                                                                                         <  2:338842/150‑1 (MQ=255)
                                                ccTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTg                                                                                                        <  1:1882528/150‑1 (MQ=255)
                                                 cTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTTCCCGCAACCACAACTACAGCAAAATCCATGa                                                                                                       >  1:3366441/1‑150 (MQ=255)
                                                 cTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGa                                                                                                       >  2:3815593/1‑150 (MQ=255)
                                                      gTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCCCACCCACAAGTAATGCAAAGTCCTTGAAAccg                                                                                                  >  1:1098658/1‑149 (MQ=255)
                                                          ttcGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGt                                                                                              >  2:1784903/1‑150 (MQ=255)
                                                            cGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTaa                                                                                            <  1:2149304/150‑1 (MQ=255)
                                                              gATCGGGTTTTCACCTCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATa                                                                                          <  1:977128/150‑1 (MQ=255)
                                                                 cGGGTTTTCACATCAGTGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCt                                                                                       >  1:2913963‑M2/1‑149 (MQ=255)
                                                                  gggTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGGCCAGCGGCGCCTGTCTGGGCCTCTTCGCGGGCGTGCCCGCTCCCACAACTACATCCAAGTCCTGGTAACCGGCGTCATAccag                                                                                      >  2:1235900/1‑148 (MQ=255)
                                                                   ggTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgt                                                                                     >  1:1082106‑M2/1‑147 (MQ=255)
                                                                    gTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgtg                                                                                    >  2:599869‑M2/1‑146 (MQ=255)
                                                                    gTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgtg                                                                                    >  2:437899‑M2/1‑146 (MQ=255)
                                                                    gTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGAGAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgtg                                                                                    >  1:3988875‑M2/1‑146 (MQ=255)
                                                                     ttttCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgtgg                                                                                   >  2:2420696‑M2/1‑145 (MQ=255)
                                                                     ttttCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgtgg                                                                                   >  1:851191‑M2/1‑145 (MQ=255)
                                                                     ttttCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgtgg                                                                                   >  1:818401‑M2/1‑145 (MQ=255)
                                                                     ttttCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCGTTCCCCCGCCCCCAACTACAGCAAAGTACGTGAAACCGGCGGAATAACagtgg                                                                                   <  1:3989597‑M2/150‑6 (MQ=255)
                                                                          acaTCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAggtattacgcaggtttcaaggactttgcagtacttgtgggagcg                                                                              <  2:2179076‑M1/150‑45 (MQ=255)
                                                                          acaTCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAggtattacgcaggtttcaaggactctgcagtacttgtgggagcg                                                                              <  1:1171017‑M1/150‑45 (MQ=255)
                                                                          acaTCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAAACTGCGTAATACCggtgggggcg                                                                              <  2:2091487‑M2/150‑11 (MQ=255)
                                                                           ccggcggcgttggtagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCgg                                                                            >  1:4398308‑M1/76‑150 (MQ=255)
                                                                           ccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCgg                                                                            >  2:2676050‑M1/76‑150 (MQ=255)
                                                                           caTCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAggtattacgcaggtttcaaggactttgcagtacttgtgggagcgg                                                                             <  1:1779042‑M1/150‑46 (MQ=255)
                                                                           caTCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgtgggagcgg                                                                             >  1:1424757‑M2/1‑139 (MQ=255)
                                                                           caTCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgtgggagcgg                                                                             >  1:585564‑M2/1‑139 (MQ=255)
                                                                            cggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCggg                                                                           >  2:3596921‑M1/75‑150 (MQ=255)
                                                                            aTCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGc                                                                                                                  >  1:80519/1‑112 (MQ=255)
                                                                             tCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGGTTGCCCGCTACCACAAGTACTGCAAAGTCCTTTTAAACTGGGTAATACCtgtgggtgcgggc                                                                           <  2:3480756‑M2/150‑14 (MQ=255)
                                                                             tCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCGCCCCCAAGGACTGCAAAGTCCGTGAAACCTGCGTAATACCtgggggagcgggc                                                                           <  2:3880444‑M2/150‑14 (MQ=255)
                                                                             ggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGc                                                                          >  2:1810562‑M1/74‑150 (MQ=255)
                                                                              cAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGGACTGCAAAGTCCATGAAACCTGCGTAATACCtgtgggagcgggcc                                                                          <  2:253886‑M2/150‑15 (MQ=255)
                                                                                  gCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgtgggagcgggcaagcc                                                                      >  1:2338747‑M2/1‑132 (MQ=255)
                                                                                          ttggtCTGTGCACGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAggtattacgcaggtttcaaggactttgcagtacttgtgggagcgggcaagcccgcgaaga                                                              <  2:4444493‑M1/150‑61 (MQ=255)
                                                                                          ttggtCTGTGCAAGGATTAGAGACCCGCTGGTCGCGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTCCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAACCCGGCGTAATACCtgtgggagcgggcaagcccgcgaaga                                                              >  2:4248496‑M2/1‑124 (MQ=255)
                                                                                                    cAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCAAAAATACTGCAAAGTCCTTGAAACCTGCGGAATACCTGTGGGAGCGGGCAAACCCGCGAAGAGGCCGGTACa                                                   >  2:440587/1‑150 (MQ=255)
                                                                                                    cAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCGCCCCCCAGGACGGCCAACTCCGTGGAACCGGCGTAAAAACTGTGTGGGCCGGCCAGCCCCCCAAGAGGCCggggca                                                   >  1:2741862/1‑146 (MQ=255)
                                                                                                      ctgATTAGATCACCGCTTGTCTCGGCCACGGCCAGCGGCGCCTGTTTGGGCCTCTCGGGGGGCTTCCCGGCTCCCAAACTTACTGAAAAGTCCTTGAAACCTGCTAATTCCGGTTGGTTGCGGGAAAGCCCGCGAAGAGGCCGGTACAGa                                                 <  2:1662140/148‑1 (MQ=255)
                                                                                                             gATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTTCCCGCTGCCACAAGTACTGCAAAGTCCTTGTAACCTGGGTAATACCTGTGGGTGCGGGGAAGCCCGCGTAGAGGCCGGTACAGACCTgaaa                                          >  2:3593565/1‑150 (MQ=255)
                                                                                                                aaCCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCCCTCCCACAAGTAAAGCAAAATGCTTGAAAACAGCGTAATAACTGTGGGAGCGGGCAAGCCCGCGCAGAGGCCCGTAAAGACAAAAAATTa                                       >  2:1243822/1‑150 (MQ=37)
                                                                                                                  ccGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGGTTGCCCGCTCCCACATGTACTGCAACGTCCTTTAAACCTGCTTAATACCTGTTGGAGCGGGAAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACt                                     <  2:4019465/150‑1 (MQ=38)
                                                                                                                         tCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGTCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACCTAAAATTAATGTGCCtt                              >  2:612384/1‑150 (MQ=255)
                                                                                                                         tCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGTCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCtt                              >  2:612445/1‑150 (MQ=255)
                                                                                                                          cGAGGCCAAGTCCAGCGGCGCCTGTAGGGGCCTCGACGCGGGCTGGCCCGCTCCCACACGTACTGCAACGTCATTGAACCCGGCTTAATACCTGGGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTg                             <  2:3256639/150‑1 (MQ=38)
                                                                                                                               ccAACTCCAGCGGCGCCTGAATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGAACTCCAAACTCCTTGAAACCTGCGTAAAACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCaaa                        <  2:4124396/150‑1 (MQ=37)
                                                                                                                                 aaGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACATCAAAGTGCTTGTAAACCGCGTAAAACCTGTGGGCGCGGGGCAGCCCGCGAAGCGGCCGGTGCAGACATAAAAATACTGTGGCTTGCCCAaca                      >  2:3887090/1‑150 (MQ=25)
                                                                                                                                      cAGCGGCGCCTGTATGGGCATCTTCGCGGGCTTGCCCGCTCCCACCAGTACTGCAACGTCCTTGAAACCTGCGTAATACCTGTGGTAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTg                 <  2:2174019/150‑1 (MQ=255)
                                                                                                                                        gcggcgCCTGTATGGGCCTCTTGGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTc               <  2:3179174/150‑1 (MQ=255)
                                                                                                                                             gcgtGTTTGGGCCTCTTCGGGGGGTTGCCCGCACCCACACTTACGGCAACGCCCTTGAAACCTGCTTAATACCGGTGGGAGGGGGAAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGAt          <  2:390386/147‑1 (MQ=255)
                                                                                                                                               gtgttggggCCTGTGGGCGGGGTTGCCCGCTCACACACTTACTCAAATGTCTTTTAAACCTGCGATCTTCCTGTGGTTGCGGGCACGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATgg        <  2:1703436/144‑1 (MQ=255)
                                                                                                                                                tGTATGGGCCTCTTCGCGGGCTTGCCCCCTCCCACAAGTACTGCAAACTACTTGAAACCAGCGGAAAACCGGTGGGAGCGGGCAAGCCCCCGAAGAGGCCGGTACAGACATAAAAATAATGTGCCATTCCAAACACCTTGTCCAGATtgg       >  2:261467/1‑150 (MQ=25)
                                                                                                                                                      |                                                                                                                                                     
GCTCGGCAGCAGCGGAAATCGAGCCGCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCA  >  NC_002947/5290214‑5290512

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.