New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 6177773 =233 (1.180)3 (0.020) 3/266 NT 1.3% coding (802/1377 nt) atpD ATP synthase subunit beta
?NC_002947 6177808 = 229 (1.210)coding (767/1377 nt) atpD ATP synthase subunit beta
Rejected: Frequency below/above cutoff threshold.

Only 100 of 266 total aligned reads displayed.

GTGGCGTCCAAGTGGGCGAAGGTGGTCGCTGGCGACGGGTCGGTCAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTCGTCACGGAACTTCTCGGCCATGGTCAGGCCGGTCAGCGCTA  >  NC_002947/6177625‑6177922
                                                                                                                                                    |                                                                                                                                                     
 gatgaacgagccaccaggaaaccgtctgcgtgtagcgctgaccggcctgaccatggccgagaagttccgtgacgaaggtaacgacgttctgctgttcgtcgacaacatctatcgttacaccctggccggtaccgaagtatccgcactgct                                                                                                                                                     <  1:2516439‑M1/3‑1 (MQ=255)
 gatgaacgagccaccaggaaaccgtctgcgtgtagcgctgaccggcctgaccatggccgagaagttccgtgacgaaggtaacgacgttctgctgttcgtcgacaacatctatcgttacaccctggccggtaccgaagtatccgcactgct                                                                                                                                                     >  1:4271642‑M1/148‑150 (MQ=255)
 gatgaacgagccaccaggaaaccggctgcgtgtagcgctgaccggcctgaccatggccgagaagttccgtgacgaaggtaacgacggtctgcggttcgtcgacaacatctatcgtgacaccctggccggtaccgaagtatccgcactgct                                                                                                                                                     <  1:1239545‑M1/3‑1 (MQ=255)
  atgaacgagccaccaggaaaccgtctgcgtgtagcgctgaccggcctgaccatggccgagaagttccgtgacgaaggtaacgacgttctgctgttcgtcgacaacatctatcgttacaccctggccggtaccgaagtatccgcactgctg                                                                                                                                                    >  2:3391453‑M1/147‑150 (MQ=255)
   tgaacgagccaccaggaaaccgtctgcgtgtagcgctgaccggcctgaccatggccgagaagttccgtgacgaaggtaacgacgttctgctgttcgtcgacaacatctatcgttacaccctggccggtaccgaagtatccgcactGCTgg                                                                                                                                                   >  1:862909‑M1/146‑150 (MQ=255)
    cGTCCAAGTGGGCGAAGGTGGTCGCTGGCGACGGGTCGGTCAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGt                                                                                                                                                  >  2:2223336/1‑150 (MQ=255)
      tCCAAGTGGGCGAAGGTGGTCGCTGGCGACGGGTCGGTCAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTaa                                                                                                                                                <  1:1656125/150‑1 (MQ=255)
      tCCAAGTGGGCGAAGGTGGTCGCTGGCGACGGGTCGGTCAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTaa                                                                                                                                                <  1:3539204/150‑1 (MQ=255)
        cAAGTGGGCGAAGGTGGTCGCTGGCGACGGGTCGGTCAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAAcc                                                                                                                                              <  1:3265339/150‑1 (MQ=255)
           gTGGGCGAAGGTGGTCGCTGGCGACGGGTCGGTCAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTAc                                                                                                                                           <  2:2096032/150‑1 (MQ=255)
            tGGGCGAAGGTGGTCGCTGGCGACGGGTCGGTCAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACt                                                                                                                                          >  2:2576564/1‑150 (MQ=255)
            tGGGCGAAGGTGGTCGCTGGCGACGGGTCGGTCAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACt                                                                                                                                          <  1:1721661/150‑1 (MQ=255)
               gCGAAGGTGGTCGCTGGCGACGGGTCGGTCAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGcc                                                                                                                                       >  2:2641989/1‑150 (MQ=255)
                 gAAGGTGGTCGCTGGCGACGGGTCGGTCAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGa                                                                                                                                     >  2:2793523/1‑150 (MQ=255)
                 gAAGGTGGTCGCTGGCGACGGGTCGGTCAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGa                                                                                                                                     >  2:3376012/1‑150 (MQ=255)
                 gAAGGTGGTCGCTGGCGACGGGTCGGTCAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGa                                                                                                                                     >  1:3384126/1‑150 (MQ=255)
                 gAAGGTGGTCGCTGGCGACGGGTCGGTCAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGa                                                                                                                                     >  2:782270/1‑150 (MQ=255)
                  aaGGTGGTCGCTGGCGACGGGTCGGTCAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGaa                                                                                                                                    <  1:2328666/150‑1 (MQ=255)
                  aaGGTGGTCGCTGGCGACGGGTCGGTCAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGaa                                                                                                                                    <  1:3308064/150‑1 (MQ=255)
                  aaGGTGGTCGCTGGCGACGGGTCGGTCAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGaa                                                                                                                                    <  2:3594868/150‑1 (MQ=255)
                   aGGTGGTCGCTGGCGACGGGTCGGTCAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAg                                                                                                                                   <  1:3375320/150‑1 (MQ=255)
                     gtggtCGCTGGCGACGGGTCGGTCAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGc                                                                                                                                 >  1:2645797/1‑150 (MQ=255)
                          cGCTGGCGACGGGTCGGTCAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACg                                                                                                                            >  1:4307168/1‑150 (MQ=255)
                             tGGCGACGGGTCGGTCAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGcc                                                                                                                         <  2:1100339/150‑1 (MQ=255)
                             tGGCGACGGGTCGGTCAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGcc                                                                                                                         >  2:2051970/1‑150 (MQ=255)
                              ggCGACGGGTCGGTCAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGccc                                                                                                                        <  2:2334699/150‑1 (MQ=255)
                               gCGACGGGTCGGTCAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCca                                                                                                                       <  2:1944744/150‑1 (MQ=255)
                               gCGACGGGTCGGTCAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCca                                                                                                                       <  1:596845/150‑1 (MQ=255)
                                cGACGGGTCGGTCAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCcag                                                                                                                      <  1:2964829/150‑1 (MQ=255)
                                cGACGGGTCGGTCAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCcag                                                                                                                      <  1:1340432/150‑1 (MQ=255)
                                  aCGGGTCGGTCAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCcagca                                                                                                                    <  1:886384/150‑1 (MQ=255)
                                    cgctgaccggcctgaccatggccgagaagttccgtgacgaaggtaacgacgttctgctgttcgtcgacaacatctatcgttacaccctggccggtaccgaagtatccgcactGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGt                                                                                                                  >  1:3585362‑M1/113‑150 (MQ=255)
                                       tcggtcAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCg                                                                                                               <  2:3662155/150‑1 (MQ=255)
                                       tcggtcAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCg                                                                                                               <  2:4419721/150‑1 (MQ=255)
                                       tcggtcAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCg                                                                                                               >  1:2264358/1‑150 (MQ=255)
                                          gtcAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGAt                                                                                                            >  2:903778/1‑150 (MQ=255)
                                            cAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATAc                                                                                                          <  2:3057052/150‑1 (MQ=255)
                                             aaGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACt                                                                                                         >  2:838696/1‑150 (MQ=255)
                                                tcgtcCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCg                                                                                                      >  1:4407426/1‑150 (MQ=255)
                                                   tcCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGAGCGGATACTTCGGtc                                                                                                   >  2:396065/1‑149 (MQ=255)
                                                     cGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTAcc                                                                                                 >  2:2400737/1‑150 (MQ=255)
                                                           tACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAg                                                                                           <  2:3978122/150‑1 (MQ=255)
                                                            aCGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAgg                                                                                          <  1:3847715/150‑1 (MQ=255)
                                                            aCGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAgg                                                                                          <  2:3190960/150‑1 (MQ=255)
                                                              gTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGgt                                                                                        <  2:655332/150‑1 (MQ=255)
                                                              gTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGgt                                                                                        >  1:1409713/1‑150 (MQ=255)
                                                                ataCGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGgtgt                                                                                      >  2:1433007/1‑150 (MQ=255)
                                                                 taCGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTa                                                                                     >  2:3275509/1‑150 (MQ=255)
                                                                    ggCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACg                                                                                  >  1:1849582/1‑150 (MQ=255)
                                                                       cTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATa                                                                               <  1:746192/150‑1 (MQ=255)
                                                                        tGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAg                                                                              <  2:4305268/150‑1 (MQ=255)
                                                                         gTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGa                                                                             <  2:2708534/150‑1 (MQ=255)
                                                                         gTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGa                                                                             <  1:145561/150‑1 (MQ=255)
                                                                          tACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGAt                                                                            <  2:3700282/150‑1 (MQ=255)
                                                                          tACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGAt                                                                            <  2:1903454/150‑1 (MQ=255)
                                                                            cGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGAtgt                                                                          >  2:3259904/1‑150 (MQ=255)
                                                                             ggAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGAtgtt                                                                         >  2:2020644/1‑150 (MQ=255)
                                                                                ggTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGATCGCCCATCTCTTCAGCCAGGGTCTGCTGGTAACCTACTTCCGAAGGCATACGGCCCAGCAGTGCGGATACTTATTTACCTGCCAGGGTGTAACGATAGATGTTGTc                                                                      <  1:192190/150‑1 (MQ=255)
                                                                                ggTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTc                                                                      <  1:1600725/150‑1 (MQ=255)
                                                                                ggTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTc                                                                      <  1:3745837/150‑1 (MQ=255)
                                                                                   gATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTcgac                                                                   <  1:1115574/150‑1 (MQ=255)
                                                                                     tCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTcgacga                                                                 >  2:1040203/1‑150 (MQ=255)
                                                                                      cGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGaa                                                                <  1:107403/150‑1 (MQ=255)
                                                                                        aaCCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAAca                                                              <  2:2955895/150‑1 (MQ=255)
                                                                                              ccttGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGaa                                                        <  2:4241245/150‑1 (MQ=255)
                                                                                              ccttGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGaa                                                        <  2:1332124/150‑1 (MQ=255)
                                                                                              ccttGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGCCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCTACGAACAGCAGaa                                                        >  2:4182814/1‑150 (MQ=255)
                                                                                                    tggAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAAcgtcgt                                                  >  2:1806712/1‑150 (MQ=255)
                                                                                                    tggAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAAcgtcgt                                                  >  1:1794385/1‑150 (MQ=255)
                                                                                                       aGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTAc                                               <  1:3281572/150‑1 (MQ=255)
                                                                                                         gTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCt                                             <  2:1756690/150‑1 (MQ=255)
                                                                                                          tGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCtt                                            <  2:3756799/150‑1 (MQ=255)
                                                                                                          tGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCtt                                            >  1:1024915/1‑150 (MQ=255)
                                                                                                          tGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCtt                                            >  1:2043360/1‑150 (MQ=255)
                                                                                                           gATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATCGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTc                                           >  1:3503441/1‑150 (MQ=255)
                                                                                                           gATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTc                                           <  2:4165511/150‑1 (MQ=255)
                                                                                                           gATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTc                                           >  1:3028369/1‑150 (MQ=255)
                                                                                                            aTGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTCg                                          >  1:3984602/1‑150 (MQ=255)
                                                                                                            aTGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTCg                                          <  1:3153030/150‑1 (MQ=255)
                                                                                                              gcgcTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTCGTc                                        <  1:2425383/150‑1 (MQ=255)
                                                                                                              gcgcTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTCGTc                                        >  2:1647395/1‑150 (MQ=255)
                                                                                                                 ctctTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTCGTCACg                                     >  1:2191135/1‑150 (MQ=255)
                                                                                                                  tctTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTCGTCACgg                                    <  1:2599116/150‑1 (MQ=255)
                                                                                                                      gCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCAt                                                                                                                               <  2:1175768/55‑1 (MQ=255)
                                                                                                                      gCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCAt                                                                                                                               >  1:1175768/1‑55 (MQ=255)
                                                                                                                             gCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTCGTCACGGAACTTCTCGGc                         >  1:2827221/1‑150 (MQ=255)
                                                                                                                                  tctcTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTCGTCACGGAACTTCTCGGCCATgg                    >  2:252299/1‑150 (MQ=255)
                                                                                                                                   ctctTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTCGTCACGGAACTTCTCGGCCATGGt                   <  1:691488/150‑1 (MQ=255)
                                                                                                                                   ctctTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTCGTCACGGAACTTCTCGGCCATGGt                   <  2:1997754/150‑1 (MQ=255)
                                                                                                                                      ttCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTCGTCACGGAACTTCTCGGCCATGGTCAg                >  1:2696922/1‑150 (MQ=255)
                                                                                                                                      ttCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTCGTCACGGAACTTCTCGGCCATGGTCAg                >  1:1611167/1‑150 (MQ=255)
                                                                                                                                            cAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTCGTCACGGAACTTCTCGGCCATGGTCAGGCCGGt          >  1:496197/1‑150 (MQ=255)
                                                                                                                                            cAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTCGTCACGGAACTTCTCGGCCATGGTCAGGCCGGt          <  1:1605426/150‑1 (MQ=255)
                                                                                                                                              gggTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTCGTCACGGAACTTCTCGGCCATGGTCAGGCCGGTCa        <  2:4407474/150‑1 (MQ=255)
                                                                                                                                               ggTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTCGTCACGGAACTTCTCGGCCATGGTCAGGCCGGTCAg       >  2:1497534/1‑150 (MQ=255)
                                                                                                                                               ggTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTCGTCACGGAACTTCTCGGCCATGGTCAGGCCGGTCAg       >  2:2859523/1‑150 (MQ=255)
                                                                                                                                                gTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTCGTCACGGAACTTCTCGGCCATGGTCAGGCCGGTCAgc      <  2:3429942/150‑1 (MQ=255)
                                                                                                                                                gTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTCGTCACGGAACTTCTCGGCCATGGTCAGGCCGGTCAgc      <  1:4455265/150‑1 (MQ=255)
                                                                                                                                                gTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTCGTCACGGAACTTCTCGGCCATGGTCAGGCCGGTCAgc      <  2:1237769/150‑1 (MQ=255)
                                                                                                                                                gTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTCGTCACGGAACTTCTCGGCCATGGTCAGGCCGGTCAgc      <  2:2443831/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
GTGGCGTCCAAGTGGGCGAAGGTGGTCGCTGGCGACGGGTCGGTCAAGTCGTCCGCAGGTACGTATACGGCCTGTACGGAGGTGATCGAACCTTCCTTGGTGGAGGTGATGCGCTCTTGCAGAACGCCCATCTCTTCAGCCAGGGTCGGCTGGTAACCTACTGCCGAAGGCATACGGCCCAGCAGTGCGGATACTTCGGTACCGGCCAGGGTGTAACGATAGATGTTGTCGACGAACAGCAGAACGTCGTTACCTTCGTCACGGAACTTCTCGGCCATGGTCAGGCCGGTCAGCGCTA  >  NC_002947/6177625‑6177922

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.