BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3321086 =	120 (0.610)	9 (0.050)	6/254	NT	8.0%	intergenic (‑85/+107)	treSA/PP_2919	trehalose synthase A/LysR family transcriptional regulator
*	?	NC_002947	3321171 =	96 (0.530)	9 (0.050)	6/254	NT	8.0%	intergenic (‑170/+22)	treSA/PP_2919	trehalose synthase A/LysR family transcriptional regulator

Only 100 of 124 total aligned reads displayed.

GCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTCCCGGTGCCAGGCCAACCCCACGCTCATCGGCGT  >  NC_002947/3321024‑3321315

gCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCACTCCCCCACGCCGACATACCGCGGAAAATTTGCGCTGCACCAGAGGGAGCGGGAGCGCCCGCGACCAGGc                                                                                                                                                >  1:3309851/1‑150 (MQ=255)

     ggCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGGGTGCCCCCGGCCCCAGGCGGGCCGAACCCAGAAGAATTTGGCTGCACCAGTGGGAGCGGGGGGGCCCCCCCACAGGCCCGGc                                                                                                                                           >  1:2760325/1‑150 (MQ=255)

       cTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCt                                                                                                                                         <  2:1758399/150‑1 (MQ=255)

        tCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTTCCCGCTCCCCAAGGCCGACCTACCGCAGAATAGTTTCGCTGCACCAGTGGGTCCGGGCCCGCCCGCCAAAAGGCCGGGccag                                                                                                                                        >  1:3309554/1‑148 (MQ=255)

        tCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTTCCCCCTCCCCCACGCCGACATACCGCGGAACTTTTGCGGTGCCCCGGGGGGAGCGGGGGCGCCCGCGCAGACGCCCGGccag                                                                                                                                        >  1:3685483/1‑148 (MQ=255)

          aGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTTCCCCCGCCCCCAGCCGGCCCTACCGCAGAAGAGTTGGGCTGCACCAGGGGGAGCGGGCCCGCCCGCCGCGACGCCGGGCCAGcc                                                                                                                                      >  1:1021623/1‑149 (MQ=255)

          aGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCCCAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCGGCa                                                                                                                                      >  2:2704421/1‑150 (MQ=255)

          aGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCCCTCCCACAGGCGGACCTACCCCGGAAAATTTTCGCTGCACCAGTGGGAGCGGGCGCGCCCCCCAACACGCCGGGCCAGCa                                                                                                                                      >  2:443598/1‑150 (MQ=255)

             ttATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCCCTCCCACACGCGGACAAACCGCTGAAGAATTGCGCTGCACCGGTGGGGGCGGGCCCGCCCCCCAACAGGCCGGGCCTGCAAAg                                                                                                                                   >  2:2312740/1‑150 (MQ=255)

                tGACGGCGCTGCGGCCTGAACTTTCGGCTAATGATGGGTTTTGGTTCGGTCGCGGGCTGGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCa                                                                                                                                <  2:2107992/150‑1 (MQ=38)

                tGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGTTTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCa                                                                                                                                <  1:738596/150‑1 (MQ=255)

                tGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTGGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCa                                                                                                                                <  2:130296/150‑1 (MQ=255)

                      cgcTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCa                                                                                                                          <  2:4322633/150‑1 (MQ=255)

                             gCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCgg                                                                                                                   <  2:4280929/150‑1 (MQ=255)

                               cTGAACGTTCGGCTCAAGATGGGTGGTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCGGAAGATTTGCGCTGCACCTCTGGGAGCGGGCGCGCCCGCCAAGAGGCCGGGCCGGCAAAGGCAGGATCACCGCCgcgc                                                                                                                 >  2:4002851/1‑150 (MQ=255)

                                tGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCCCAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGcc                                                                                                                <  2:4259113/150‑1 (MQ=255)

                                tGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGcc                                                                                                                <  2:1959433/150‑1 (MQ=255)

                                tGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCCCGCCCACACGCGGACATACAGCAGAAGTATTTCGCTGCACCCGTGGGCACGGGCCCGCCCCCGCCGACGCCCGCCCAGCCAAGGCAACATAACCGCCGGGcc                                                                                                                >  2:2280731/1‑150 (MQ=255)

                                tGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTGGCCCGCTCCCACAGGCGGACATACCGCTGAATATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGcc                                                                                                                <  1:2783036/150‑1 (MQ=255)

                                  caCGTTCGGCTCAAGAGGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATCCCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGa                                                                                                              <  2:1310954/149‑1 (MQ=255)

                                  accGTTCGGCTCAAGCTGGGTGTTGGTTTCTGCGCGGGCTTGCCCGCTCCCACAGGCGGACATCCCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGa                                                                                                              <  2:1086620/148‑1 (MQ=255)

                                  aaggtgcGGCTAATGTTGGGTGTTGGTTTCTTCGGGGGCTGGCCCGCTCCCACTGGCGGAAAACCCGCTGAAGATTTGCGCTGCACCGGGGGGCGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGa                                                                                                              <  1:2719754/144‑1 (MQ=255)

                                  aaCGTTCGGCTCAAGATGGGTGTTGGTTTCTACGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGa                                                                                                              <  2:1874701/150‑1 (MQ=255)

                                     gTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACaa                                                                                                           <  1:1474671/150‑1 (MQ=255)

                                      ttCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTTCCCGCTCCCACAGGCGGACAAAACCCGGAAGGTTTTCGCTGGACCTGTGGGTGCGGGCGCGCCCGCGCAGACGCCCGGCCGGCAAAGGCAGGATAACCGCCCGGCCGCCAAc                                                                                                          >  2:154359/1‑150 (MQ=255)

                                            tCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCGGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCCAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACggcagc                                                                                                    >  2:3636261/1‑150 (MQ=255)

                                             cAAGAGGGGTGTTGGTTTCTGCGCGGGCGTGCCCGCTCCCACCGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGGGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCg                                                                                                   <  1:4395637/150‑1 (MQ=255)

                                              aaGATGGGTGTTGGTTTCTTCGCGGGCTTTCCCGCGCCCACAGGCGGGCATACCGCTGAAGATTTTCGCTGCACCTGTGGGGGCGGGCGCGCCCGCGAAGAGGCCGGGCCAGCAAAGGCAGGATAACCGCCGGGCCGACAACAGCTGCgg                                                                                                  >  2:1663120/1‑150 (MQ=255)

                                              aaGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCCCTCCCCCAGGCGGGCCTACCGCTGAAGAGTTGCGCTGCCCCGGGGGGAGCGGGCGCGCCCGCGACCAGGGCGGGCCGGCAAAGGCCGGGTCACCGCCCGGCCGACAACAGCTGCgg                                                                                                  >  2:1663020/1‑150 (MQ=255)

                                               tgttgggtttgggttTCTTCGGGGGCTTGCCCGCCCCCACTGGCGGACATCCCGCTTATGTTTTGCGCTGCCCCTGGGGGCGGGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGt                                                                                                 <  1:1985011/147‑1 (MQ=255)

                                                    ggTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAGACCGCTGAAGATTTGCGCTGCACCGGGGGGAGCGGGCGCGCCCGCGCAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACAGCAGCGGTGCCac                                                                                            >  2:4407321/1‑149 (MQ=255)

                                                    ggTGTGGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAg                                                                                            <  2:821119/150‑1 (MQ=255)

                                                       gtTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGACGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGaaa                                                                                         <  2:1588149/150‑1 (MQ=255)

                                                       gtTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGaaa                                                                                         <  2:2788232/150‑1 (MQ=255)

                                                              tcttcgcgggcgcgcccgctcccacaggtgcagcgcaaatcttcagcggtatgtccgcctgtgggagcgggcaagcccgcgaagaGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGcatca                                                                                  >  1:3514990‑M2/86‑150 (MQ=255)

                                                                   ggGGGGTTGCCCGCTCCCACCGGCGTACATACGGCTTAATTTTTGGGCTGCACCTGTGGGCGGGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGaa                                                                             >  1:1587825‑M1/3‑150 (MQ=255)

                                                                   GCGGGCTTGCCCGCTCCCACCGGCGGACATCCCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGaa                                                                             >  1:2821581‑M1/1‑150 (MQ=255)

                                                                     GGGCTTGCCCGCTCCCACTGGCGGACATACGGCTGATGATTTGCTCTGCACGTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTTCGGTGCCAGAAACGCATCATGGAAGt                                                                           >  2:2267189‑M1/1‑150 (MQ=255)

                                                                         ttGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGTGAGCGGGCCCGCCCGCGAAGATGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGCTGACCGAAACGCATCATGGAAGTaaat                                                                       >  1:4289425/1‑148 (MQ=255)

                                                                         ttGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAAtt                                                                       >  2:143663/1‑150 (MQ=255)

                                                                             ccGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTgcgc                                                                   >  1:4250736/1‑150 (MQ=255)

                                                                             ccGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTgcgc                                                                   >  1:923402/1‑150 (MQ=255)

                                                                             ccGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTgcgc                                                                   >  2:299167/1‑150 (MQ=255)

                                                                             ccGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTgcgc                                                                   >  1:2882463/1‑150 (MQ=255)

                                                                             ccGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGATGCGGTGCCAGAAACGCATCATTGAAGTAATTgcgc                                                                   >  1:3858452/1‑150 (MQ=255)

                                                                              cGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCa                                                                  <  2:2412876/150‑1 (MQ=255)

                                                                               gctcccacaggtgcagcgcagatcttcagcggtatgtccgcctgtgggagcgggcaagcccgcgaagaGGCCGGGCCTGCAAAGGCAGGAt                                                                                                                            >  2:1853368‑M2/69‑91 (MQ=255)

                                                                                 tcccacaggtgcagcgcaaatcttcagcggtatgtccgcctgtgggagcgggcaagcccgcgaagaGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCg                                                               >  1:1427830‑M2/67‑150 (MQ=255)

                                                                                   ccacaggtgcagcgcaaatcttcagcggtatgtccgcctgtgggagcgggcaagcccgcgaagaGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGcc                                                             >  1:3992127‑M2/65‑150 (MQ=255)

                                                                                   ccacaggtgcagcgcaaatcttcagcggtatgtccgcctgtgggagcgggcaagcccgcgaagaGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGcc                                                             >  1:3242477‑M2/65‑150 (MQ=255)

                                                                                   ccACTGGCGGACATACCGCTTATTTTTTGCGCGGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGcc                                                             <  1:3509424/150‑1 (MQ=39)

                                                                                   ccACAGGCGGACCTACCGCGGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCCGAAACGCATCATGGAAGTAATTGCGCACCGcc                                                             >  2:1925436/1‑150 (MQ=255)

                                                                                   ccACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGcc                                                             >  1:4494757/1‑150 (MQ=255)

                                                                                   ccACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGcc                                                             >  1:2635233/1‑150 (MQ=255)

                                                                                   ccACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGcc                                                             >  2:4183530/1‑150 (MQ=255)

                                                                                    cacaggtgcagcgcaaatcttcagcggtatgtccgcctgtgggagcgggcgcgcccgcgaagaGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCt                                                            >  2:291560‑M2/64‑150 (MQ=255)

                                                                                    cacaggtgcagcgcaaatcttcagcggtatgtccgcctgtgggagcgggcgcgcccgcgaagaGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCt                                                            >  1:2352820‑M2/64‑150 (MQ=255)

                                                                                    cacaGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGTAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCt                                                            <  2:4479354/150‑1 (MQ=255)

                                                                                    cacaGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCt                                                            >  2:636332/1‑150 (MQ=255)

                                                                                    cacaGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCt                                                            <  2:4479392/150‑1 (MQ=255)

                                                                                       aGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGaa                                                                             <  2:1442561/130‑1 (MQ=255)

                                                                                            gACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGcc                                                    >  1:3384939/1‑150 (MQ=255)

                                                                                              cATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCgg                                                  <  1:1393714/150‑1 (MQ=255)

                                                                                                  ccGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTg                                              >  1:951764/1‑150 (MQ=255)

                                                                                                     cTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAAt                                           <  1:2871258/150‑1 (MQ=255)

                                                                                                      tGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATg                                          >  2:3901089/1‑150 (MQ=255)

                                                                                                      tGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATg                                          >  2:4433329/1‑150 (MQ=255)

                                                                                                      tGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATg                                          >  2:555276/1‑150 (MQ=255)

                                                                                                       gAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGc                                         >  2:2614500/1‑150 (MQ=255)

                                                                                                       gAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGc                                         >  2:917225/1‑150 (MQ=255)

                                                                                                       gAAGATTTGCGCTGCACCGGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGc                                         <  2:3654933/150‑1 (MQ=255)

                                                                                                         aGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGccc                                       <  1:2510304/150‑1 (MQ=255)

                                                                                                                  cggCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTCCCGGt                              <  1:4233937/148‑1 (MQ=255)

                                                                                                                  cTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTCCCGGt                              >  1:3366756/1‑150 (MQ=255)

                                                                                                                  cTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTCCCGGt                              <  1:3937352/150‑1 (MQ=255)

                                                                                                                   tGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTCCCGGTg                             >  2:3023320/1‑150 (MQ=255)

                                                                                                                   tGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTCCCGGTg                             >  2:3179593/1‑150 (MQ=255)

                                                                                                                      aCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTCCCGGTGCCa                          <  2:2209075/150‑1 (MQ=255)

                                                                                                                      aCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTCCCGGTGCCa                          >  1:4147124/1‑150 (MQ=255)

                                                                                                                      aCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAAAGCATCATGGAAGTAATTTCGCACCGCCTGCATCGCCGGGCTGAATTCCCGTTCCCGGTGCCa                          >  1:1979927/1‑150 (MQ=255)

                                                                                                                        cTGTGGGAGGGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTCCCGGTGCCAgg                        <  1:2702043/150‑1 (MQ=255)

                                                                                                                         tgtgGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGccc                                       >  1:1296983/1‑134 (MQ=255)

                                                                                                                         tgtgGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTCCCGGTGCCAGGc                       <  2:2760325/150‑1 (MQ=255)

                                                                                                                          gtgGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTCCCGGTGCCAGGcc                      <  2:3650290/150‑1 (MQ=255)

                                                                                                                             ggAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTCCCGGTGCCAGGCCAAc                   <  1:4478501/150‑1 (MQ=255)

                                                                                                                             ggAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTCCCGGTGCCAGGCCAAc                   >  1:492634/1‑150 (MQ=255)

                                                                                                                             ggAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTCCCGGTGCCAGGCCAAc                   <  2:2014708/150‑1 (MQ=255)

                                                                                                                                gCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTCCCGGTGCCAGGCCAAcccc                >  2:2349724/1‑150 (MQ=255)

                                                                                                                                   ggCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTCCCGGTGCCAGGCCAACCCCACg             >  1:156793/1‑150 (MQ=255)

                                                                                                                                    gcgcgcCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTCCCGGTGCCAGGCCAACCCCACGc            >  1:1357843/1‑150 (MQ=255)

                                                                                                                                    gcgcgcCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTCCCGGTGCCAGGCCAACCCCACGc            >  2:4340497/1‑150 (MQ=255)

                                                                                                                                         cccgcgaagaGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTCCCGGTGCCAGGCCAACCCCACGCTCATc       >  1:2543167‑M2/11‑150 (MQ=255)

                                                                                                                                          ccgcgaagaGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTCCCGGTGCCAGGCCAACCCCACGCTCATCg      >  2:232042‑M2/10‑150 (MQ=255)

                                                                                                                                          ccgcgaagaGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTCCCGGTGCCAGGCCAACCCCACGCTCATCg      >  1:2149103‑M2/10‑150 (MQ=255)

                                                                                                                                          ccgcgaagaGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTCCCGGTGCCAGGCCAACCCCACGCTCATCg      <  1:287526‑M2/141‑1 (MQ=255)

                                                                                                                                          ccgcgaagaGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTCCCGGTGCCAGGCCAACCCCACGCTCATCg      >  1:358233‑M2/10‑150 (MQ=255)

                                                                                                                                          ccgcgaagaGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTCCCGGTGCCAGGCCAACCCCACGCTCATCg      <  1:4495900‑M2/141‑1 (MQ=255)

                                                                                                                                           cgcgaagaGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTCCCGGTGCCAGGCCAACCCCACGCTCATCgg     >  1:2577583‑M2/9‑150 (MQ=255)

                                                                                                                                            gcgaagaGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTCCCGGTGCCAGGCCAACCCCACGCTCATCGGc    <  1:1831945‑M2/143‑1 (MQ=255)

                                                                                                                                              gaagaGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTCCCGGTGCCAGGCCAACCCCACGCTCATCGGCGt  <  2:2148173‑M2/145‑1 (MQ=255)

GCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTCCCGGTGCCAGGCCAACCCCACGCTCATCGGCGT  >  NC_002947/3321024‑3321315

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.