New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 164102 = | 12 (0.720) | 3 (0.180) | 3/280 | 1.9 | 22.4% | coding (1355/1437 nt) | pntB | pyridine nucleotide transhydrogenase subunit beta |
? | NC_002947 | 164137 = | 9 (0.550) | coding (1320/1437 nt) | pntB | pyridine nucleotide transhydrogenase subunit beta |
TCGTCAACAAGCGCTCGATGGCCAGCGGCTATGCCGGCCTGGACAACGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/164150‑164102 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaGCGCTTGTTGACGATGATGGTCTTGGCCTTGAACGCTTCGAGGATCGGCATGCCGGCGATTGGCGACTTGGGGTCGTTCTTCGCCGCCGGGTTGACCACGTCGTTGGCGCCCAGTACCAGCACCACGTCGGCCTGTCCGAACTCGGCGT > NC_002947/164137‑164285 TCGTCAACAAGCGCTCGATGGCCAGCGGCTATGCCGGC‑‑‑‑‑CATCGAGCGCTTGTTGACGATGATGGTCTTGGCCTTGAACGCTTCGAGGATCGGCATGCCGGCGATTGGCGACTTGGGGTCGTTCTTCGCCGCCGGGTTGACCACGTCGTTG > 1:248545/1‑150 TCGATGGCCAGCGGCTATGCCGGCCTGGACAACGAGCGCTTGTTGACGATGATGGTCTTGGCCTTGAACGCTTCGAGGATCGGCATGCCGGCGATTGGCGACTTGGGGTCGTT < 1:334196/113‑1 TCGATGGCCAGCGGCTATGCCGGCCTGGACAACGAGCGCTTGTTGACGATGATGGTCTTGGCCTTGAACGCTTCGAGGATCGGCATGCCGGCGATTGGCGACTTGGGGTCGTT > 2:334196/1‑113 AGCGCTTGTTGACGATGATGGTCTTGGCCTTGAACGCTTCGAGGATCGGCATGCCGGCGATTGGCGACTTGGGGTCGTTCTTCGCCGCCGGGTTGACCACGTCGTTGGCGCCCAGTACCAGCACCACGTCGGCCTGTCCGAACTCGGCGT < 1:221796/150‑1 TCGTCAACAAGCGCTCGATGGCCAGCGGCTATGCCGGCCTGGACAACGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/164150‑164102 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaGCGCTTGTTGACGATGATGGTCTTGGCCTTGAACGCTTCGAGGATCGGCATGCCGGCGATTGGCGACTTGGGGTCGTTCTTCGCCGCCGGGTTGACCACGTCGTTGGCGCCCAGTACCAGCACCACGTCGGCCTGTCCGAACTCGGCGT > NC_002947/164137‑164285 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |