New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 914215 | 8 (0.480) | 6 (0.380) | 6/274 | 1.1 | 34.6% | coding (923/1743 nt) | fruA | PTS fructose transporter subunit IIBC |
? | NC_002947 | = 914241 | 15 (0.940) | coding (949/1743 nt) | fruA | PTS fructose transporter subunit IIBC |
ATCGAGGCCTACAAAGAGGCGGGCACCTTGCCGGCGGCGTTGATGCAGATTGGCGGTGAGGCTGCCTTCAAACTGATGGTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/914097‑914215 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgaTCATGCCCGGGGCCAGCCCGGGGCGGTCGGCGATAGACCAGGCGATATAGCCTGCCAGTAGCGGAACCATCAGTTTGAAGGCAGCCTCACCGCCAATCTGC < NC_002947/914241‑914141 ATCGAGGCCTACAAAGAGGCGGGCACCTTGCCGGCGGCGTTGATGCAGATTGGCGGTGAGGCTGCCTTCAAACTGATGGTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGATCATGCCCGGGGCCAGCCCGGGGCGGTCGGC > 2:157178/1‑150 AGGCCTACAAAGAGGCGGGCACCTTGCCGGCGGCGTTGATGCAGATTGGCGGTGAGGCTGCCTTCAAACTGATGGTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGATCATGCCCGGGGCCAGCCCGGGGCGGTCGGCGATA < 1:157178/150‑1 TTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGATCATGCCCGGGGCCAGCCCGGGGCGGTCGG < 1:377664/70‑1 TTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGATCATGCCCGGGGCCAGCCCGGGGCGGTCGG > 2:377664/1‑70 TATCGCCGATCATGCCCGGGGCCAGCCCGGGGCGGTCGGCGATAGACCAGGCGATATAGCCTGCCAGTAGCGGAACCATCAGTTTGAAGGCAGCCTCACCGCCAATCTGC < 1:123187/110‑1 TATCGCCGATCATGCCCGGGGCCAGCCCGGGGCGGTCGGCGATAGACCAGGCGATATAGCCTGCCAGTAGCGGAACCATCAGTTTGAAGGCAGCCTCACCGCCAATCTGC > 2:123187/1‑110 ATCGAGGCCTACAAAGAGGCGGGCACCTTGCCGGCGGCGTTGATGCAGATTGGCGGTGAGGCTGCCTTCAAACTGATGGTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/914097‑914215 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgaTCATGCCCGGGGCCAGCCCGGGGCGGTCGGCGATAGACCAGGCGATATAGCCTGCCAGTAGCGGAACCATCAGTTTGAAGGCAGCCTCACCGCCAATCTGC < NC_002947/914241‑914141 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |