New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 914215 | 8 (0.480) | 6 (0.380) | 6/274 | 1.1 | 34.6% | coding (923/1743 nt) | fruA | PTS fructose transporter subunit IIBC |
? | NC_002947 | = 914241 | 15 (0.940) | coding (949/1743 nt) | fruA | PTS fructose transporter subunit IIBC |
TTGCGTTGTCGTTCGTGTTCGGTATCGAGGCCTACAAAGAGGCGGGCACCTTGCCGGCGGCGTTGATGCAGATTGGCGGTGAGGCTGCCTTCAAACTGATGGTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGACCGCCCCGGGCTGGCCCCGGGCATGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTACAGCGCCAAGGCCATTGCCCGATGGGCGCGCTTGCCCAGCAGCCTG > NC_002947/914074‑914360 | ttGCGTTGTCGTTCGTGTTCGGTATCGAGGCCTACAAAGAGGCGGGCACCTTGCCGGCGGCGTTGATGCAGATTGGCGGTGAGGCTGCCTTCAAACTGATGGTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGACCGCCCCg < 2:160977/150‑1 (MQ=255) tcgtGTTCGGGATCGAGGCCTACAAAGAGGCGGGCACCTTGCCGGCGGCGTTGATGCAGATTGGCGGTGAGGCTGCCTTCAAACTGATGGTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGACCGCCCCGGGCTGGCCCCgg < 1:190822/150‑1 (MQ=255) aTCGAGGCCTACAAAGAGGCGGGCACCTTGCCGGCGGCGTTGATGCAGATTGGCGGTGAGGCTGCCTTCAAACTGATGGTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGAtcatgcccggggccagcccggggcggtcggc > 2:157178‑M1/1‑119 (MQ=255) aGGCCTACAAAGAGGCGGGCACCTTGCCGGCGGCGTTGATGCAGATTGGCGGTGAGGCTGCCTTCAAACTGATGGTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGAtcatgcccggggccagcccggggcggtcggcgata < 1:157178‑M1/150‑36 (MQ=255) ggCACCTTGCCGGCGGCGTTGATGCAGATTGGCGGTGAGGCTGCCTTCAAACTGATGGTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGACCGCCCCGGGCTGGCCCCGGGCATGATCGGCGGCCTGTTGGCCAGCACCTTg < 1:323670/150‑1 (MQ=255) gCAGATTGGCGGTGAGGCTGCCTTCAAACTGATGGTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGACCGCCCCGGGCTGGCCCCGGGCATGAtcggcgata < 1:123187‑M2/110‑10 (MQ=255) gCAGATTGGCGGTGAGGCTGCCTTCAAACTGATGGTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGACCGCCCCGGGCTGGCCCCGGGCATGAtcggcgata > 2:123187‑M2/1‑101 (MQ=255) ggCTGCCTTCAAACTGATGGTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGACCGCCCCGGGCTGGCCCCGGGCATGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCt > 2:11753/1‑150 (MQ=255) gggtCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGACCGCCCCGGGCTGGCCCCGGGCATGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTACAGCGCCaa < 1:114571/147‑1 (MQ=255) ggTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGACCGCCCCGGGCTGGCCCCGGGCATGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTACAGCGCCaa < 1:308646/150‑1 (MQ=255) ttCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGAtcatgcccggggccagcccggggcggtcgg < 1:377664‑M1/70‑31 (MQ=255) ttCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGAtcatgcccggggccagcccggggcggtcgg > 2:377664‑M1/1‑40 (MQ=255) aGGCTATATCGCCTGGTCTATCGCCGACCGCCCCGGGCTGGCCCCGGGCATGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTACAGCGCCAAGGCCATTGCCCGATg < 1:180871/150‑1 (MQ=255) tGGTCTATCGCCGACCGCCCCGGGCTGGCCCCGGGCATGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTACAGCGCCAAGGCCATTGCCCGATGGGCGCGCTTGccc < 2:68748/150‑1 (MQ=255) tATCGCCGAtcatgcccggggccagcccggggcggtcggcgatagaccaggcgatatagcctgccagtagcggaaccatcagtttgaaggcagcctcaccgccaatctgc < 1:123187‑M1/110‑102 (MQ=255) tATCGCCGAtcatgcccggggccagcccggggcggtcggcgatagaccaggcgatatagcctgccagtagcggaaccatcagtttgaaggcagcctcaccgccaatctgc > 2:123187‑M1/1‑9 (MQ=255) tATCGCCGACCGCCCCGGGCTGGCCCCGGGCATGAtcggcgatagaccaggcgatatagcctgccagtagcggaaccatcagtttgaaggcagcctcaccgccaatctgcatcaacgccgccggcaaggtgcccgcctctttgtaggcct < 1:157178‑M2/150‑116 (MQ=255) gCCGACCGCCCCGGGCTGGCCCCGGGCATGAtcggcgatagaccaggcgatatagcctgccagtagcggaaccatcagtttgaaggcagcctcaccgccaatctgcatcaacgccgccggcaaggtgcccgcctctttgtaggcctcgat > 2:157178‑M2/1‑31 (MQ=255) ccGACCGCCCCGGGCTGGCCCCGGGCATGAtcggcgatagaccaggcgatatagcctgccagtagcggaa < 1:377664‑M2/70‑41 (MQ=255) ccGACCGCCCCGGGCTGGCCCCGGGCATGAtcggcgatagaccaggcgatatagcctgccagtagcggaa > 2:377664‑M2/1‑30 (MQ=255) | TTGCGTTGTCGTTCGTGTTCGGTATCGAGGCCTACAAAGAGGCGGGCACCTTGCCGGCGGCGTTGATGCAGATTGGCGGTGAGGCTGCCTTCAAACTGATGGTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGACCGCCCCGGGCTGGCCCCGGGCATGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTACAGCGCCAAGGCCATTGCCCGATGGGCGCGCTTGCCCAGCAGCCTG > NC_002947/914074‑914360 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |