New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1526707	11 (0.660)	4 (0.260)	3/268	1.8	24.8%	coding (852/957 nt)	ddlB	D‑alanine‑‑D‑alanine ligase B
	?	NC_002947	= 1526720	14 (0.900)					coding (865/957 nt)	ddlB	D‑alanine‑‑D‑alanine ligase B

GCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1526656‑1526707 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaccaggcTATGATCTGTCAT‑GCCTGGTGCGGTGTTGACTTCGAGCAGCCAGAACCGGCCCTGCTCGTCCTGCATCACGTCCAACCGCCCCCAGCCTTCGATGCCAATGGCATCGCAGGCGCGCGCGGTCAGGTCGATCAGTTCCTGTTC  <  NC_002947/1526720‑1526579                                                                                                                                                                                                     GCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCTATGATCTGTCAT‑GCCTGGTGCGG                                                                                                                        <  1:349279/76‑1 GCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCTATGATCTGTCAT‑GCCTGGTGCGG                                                                                                                        >  2:349279/1‑76                                      AACACCGCACCAGGC‑ATGACAGATCATAGCCTGGTGCGGTGTTGACTTCGAGCAGCCAGAACCGGCCCTGCTCGTCCTGCATCACGTCCAACCGCCCCCAGCCTTCGATGCCACTGGCATCGCAGGCGCGCGCGGTCAGGTCGATCAGTT         >  1:310304/1‑150                                      AACACCGCACCAGGC‑ATGACAGATCATAGCCTGGTGCGGTGTTGACTTCGAGCAGCCAGAACCGGCCCTGCTCGTCCTGCATCACGTCCAACCGCCCCCAGCCTTCGATGCCAATGGCATCGCAGGCGCGCGCGGTCAGGTCGATCAGTT         >  1:310298/1‑150                                             CACCAGGCTATGATCTGTCAT‑GCCTGGTGCGGTGTTGACTTCGAGCAGCCAGAACCGGCCCTGCTCGTCCTGCATCACGTCCAACCGCCCCCAGCCTTCGATGCCAATGGCATCGCAGGCGCGCGCGGTCAGGTCGATCAGTTCCTGTTC  <  2:320700/150‑1                                                                                                                                                                                                     GCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1526656‑1526707 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaccaggcTATGATCTGTCAT‑GCCTGGTGCGGTGTTGACTTCGAGCAGCCAGAACCGGCCCTGCTCGTCCTGCATCACGTCCAACCGCCCCCAGCCTTCGATGCCAATGGCATCGCAGGCGCGCGCGGTCAGGTCGATCAGTTCCTGTTC  <  NC_002947/1526720‑1526579

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.