New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1762884 = | 14 (0.840) | 3 (0.190) | 3/276 | 1.8 | 20.3% | coding (476/477 nt) | PP_1569 | hypothetical protein |
? | NC_002947 | 1762915 = | 10 (0.620) | coding (31/342 nt) | PP_1570 | head‑tail adaptor |
GATGCGGTGCCGCAGCCTGCCGGCCTGCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1762914‑1762884 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcatcGACATCCAGGAGTTGAGGCCGGTGCGTGACCCGGTGACACTGGAGTTCGGTGAGCCTGAATGGGTCACTCGCTGGGAGAAATGCCCAGCCAGTGTCGAAGACCTGTCGGCCAGGGACTT > NC_002947/1762915‑1763033 GATGCGGTGCCGCAGCCTGCCGGCCTGCATCGACATCCAGGAGTTGAGGCCGGTGCGTGACCCGGTGACACTGGAGTTCGGTGAGCCTGAATGGGTCACTCGCTGGGAGAAATGCCCAGCCAGTGTCGAAGACCTGTCGGCCAGGGACTT > 2:67424/1‑150 ATGCGGTGCCGCAGCCTGCCGGCCTGCATCGACATCCAGGAGTTGAGGCCGGTGCGTGACCCGGTGACACTGGAGTTCGGTGAGCCTGAATGGGT < 1:120914/95‑1 ATGCGGTGCCGCAGCCTGCCGGCCTGCATCGACATCCAGGAGTTGAGGCCGGTGCGTGACCCGGTGACACTGGAGTTCGGTGAGCCTGAATGGGT > 2:120914/1‑95 GATGCGGTGCCGCAGCCTGCCGGCCTGCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1762914‑1762884 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcatcGACATCCAGGAGTTGAGGCCGGTGCGTGACCCGGTGACACTGGAGTTCGGTGAGCCTGAATGGGTCACTCGCTGGGAGAAATGCCCAGCCAGTGTCGAAGACCTGTCGGCCAGGGACTT > NC_002947/1762915‑1763033 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |