New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2103478 = | 18 (1.080) | 7 (0.430) +TT |
4/282 | 1.6 | 31.4% | intergenic (+49/+27) | msrC/PP_1878 | free methionine‑(R)‑sulfoxide reductase/hypothetical protein |
? | NC_002947 | 4898402 = | 13 (0.780) | intergenic (+68/‑140) | PP_4304/sbp‑I | VIC family cation transporter/sulfate ABC transporter substrate‑binding protein |
GCATGGCCCCGGCAGAAGACGAGCACAACGAATTGACCGATGGGCTCAAGACCGATGAGGAAGAAACCTGGAAGAAGAAGGTGATCTACGACTGATTGGTTAACCTGTGCCGGCCTCTTCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2103599‑2103478 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAAC > NC_002947/4898402‑4898517 || GCATGGCCCCGGCAGAAGACGAGCACAACGAATTGACCGATGGGCTCAAGACCGATGAGGAAGAAACCTGGAAGAAGAAGGTGATCTACGACTGATTGGTTAACCTGTGCCGGCCTCTTCGCTTGTAGGAGCGGGTTTACCCGCGAAGAG < 1:379965/150‑1 GATGAGGAAGAAACCTGGAAGAAGAAGGTGATCTACGACTGATTGGTTAACCTGTGCCGGCCTCTTCGCTTGTAGGAGCGGGTTTACCCGCGAAGAGGC < 1:12987/99‑1 GATGAGGAAGAAACCTGGAAGAAGAAGGTGATCTACGACTGATTGGTTAACCTGTGCCGGCCTCTTCGCTTGTAGGAGCGGGTTTACCCGCGAAGAGGC < 1:12993/99‑1 GATGAGGAAGAAACCTGGAAGAAGAAGGTGATCTACGACTGATTGGTTAACCTGTGCCGGCCTCTTCGCTTGTAGGAGCGGGTTTACCCGCGAAGAGGC > 2:12987/1‑99 GATGAGGAAGAAACCTGGAAGAAGAAGGTGATCTACGACTGATTGGTTAACCTGTGCCGGCCTCTTCGCTTGTAGGAGCGGGTTTACCCGCGAAGAGGC > 2:12993/1‑99 gtccgCGCCTGTAGGAGCGGATTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAAC < 1:212209/121‑1 gtccgCGCCTGTAGGAGCGGATTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAAC > 2:212209/6‑126 || GCATGGCCCCGGCAGAAGACGAGCACAACGAATTGACCGATGGGCTCAAGACCGATGAGGAAGAAACCTGGAAGAAGAAGGTGATCTACGACTGATTGGTTAACCTGTGCCGGCCTCTTCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2103599‑2103478 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCAAC > NC_002947/4898402‑4898517 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |