New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2335236 | 14 (0.840) | 4 (0.240) | 4/280 | 1.6 | 22.4% | coding (203/1185 nt) | fadA | 3‑ketoacyl‑CoA thiolase |
? | NC_002947 | = 2335264 | 14 (0.860) | coding (231/1185 nt) | fadA | 3‑ketoacyl‑CoA thiolase |
CCCCAGCATGACGGCTGTCGCTATCCGCGCCGCAGTAGAACGTGCTGGCATCGAACCGGCGCAGGTCGATGACCTGGTGCTGGGGACTGCCATGCAGAGCGGCACTGCCGCGATCAACCCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2335114‑2335236 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggCAGGCCGGCGGCCAGCGCCGACAGCCGACCCG < NC_002947/2335264‑2335233 CCCCAGCATGACGGCTGTCGCTATCCGCGCCGCAGTAGAACGTGCTGGCATCGAACCGGCGCAGGTCGATGACCTGGTGCTGGGGACTGCCATGCAGAGCGGCACTGCCGCGATCAACCCGGGTCGGCCGGCGGCCAGCGCCGACAGCCG > 1:375742/1‑150 AGCATGACGGCTGTCGCTATCCGCGCCGCAGTAGAACGTGCTGGCATCGAACCGGCGCAGGTCGATGACCTGGTGCTGGGGACTGCCATGCAGAGCGGCACTGCCGCGATCAACCCGGGTCGGCCGGCGGCCAGCGCCGACAGCCGACCC < 2:375742/150‑1 TGCCATGCAGAGCGGCACTGCCGCGATCAACCCGGGCAGGCCGGCGGCCAGCGCCGACAGCCGACCCG > 1:159406/1‑68 TGCCATGCAGAGCGGCACTGCCGCGATCAACCCGGGCAGGCCGGCGGCCAGCGCCGACAGCCGACCCG < 2:159406/68‑1 CCCCAGCATGACGGCTGTCGCTATCCGCGCCGCAGTAGAACGTGCTGGCATCGAACCGGCGCAGGTCGATGACCTGGTGCTGGGGACTGCCATGCAGAGCGGCACTGCCGCGATCAACCCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2335114‑2335236 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggCAGGCCGGCGGCCAGCGCCGACAGCCGACCCG < NC_002947/2335264‑2335233 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |