New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2335236	14 (0.840)	4 (0.240)	4/280	1.6	22.4%	coding (203/1185 nt)	fadA	3‑ketoacyl‑CoA thiolase
	?	NC_002947	= 2335264	14 (0.860)					coding (231/1185 nt)	fadA	3‑ketoacyl‑CoA thiolase

CCCCAGCATGACGGCTGTCGCTATCCGCGCCGCAGTAGAACGTGCTGGCATCGAACCGGCGCAGGTCGATGACCTGGTGCTGGGGACTGCCATGCAGAGCGGCACTGCCGCGATCAACCCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2335114‑2335236 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggCAGGCCGGCGGCCAGCGCCGACAGCCGACCCG  <  NC_002947/2335264‑2335233                                                                                                                                                             CCCCAGCATGACGGCTGTCGCTATCCGCGCCGCAGTAGAACGTGCTGGCATCGAACCGGCGCAGGTCGATGACCTGGTGCTGGGGACTGCCATGCAGAGCGGCACTGCCGCGATCAACCCGGGTCGGCCGGCGGCCAGCGCCGACAGCCG       >  1:375742/1‑150     AGCATGACGGCTGTCGCTATCCGCGCCGCAGTAGAACGTGCTGGCATCGAACCGGCGCAGGTCGATGACCTGGTGCTGGGGACTGCCATGCAGAGCGGCACTGCCGCGATCAACCCGGGTCGGCCGGCGGCCAGCGCCGACAGCCGACCC   <  2:375742/150‑1                                                                                        TGCCATGCAGAGCGGCACTGCCGCGATCAACCCGGGCAGGCCGGCGGCCAGCGCCGACAGCCGACCCG  >  1:159406/1‑68                                                                                        TGCCATGCAGAGCGGCACTGCCGCGATCAACCCGGGCAGGCCGGCGGCCAGCGCCGACAGCCGACCCG  <  2:159406/68‑1                                                                                                                                                             CCCCAGCATGACGGCTGTCGCTATCCGCGCCGCAGTAGAACGTGCTGGCATCGAACCGGCGCAGGTCGATGACCTGGTGCTGGGGACTGCCATGCAGAGCGGCACTGCCGCGATCAACCCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2335114‑2335236 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggCAGGCCGGCGGCCAGCGCCGACAGCCGACCCG  <  NC_002947/2335264‑2335233

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.