New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2458799 =	16 (0.960)	4 (0.290)	4/234	1.3	29.5%	intergenic (+85/‑96)	gapB/PP_2150	glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein
	?	NC_002947	2458863 =	6 (0.440)					intergenic (+149/‑32)	gapB/PP_2150	glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein

GGTGGGGCCTTGGTTGCAGGCGGTGAGTAGCAGCAGAATGAACAGTAGGGCTGTGCGCACAGTAGGGTTTCTCGGTTGCCGGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCGGGTTTACCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2458954‑2458799 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtaggagcgggtttacccgcgaaGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATGGGCAGCAGCTAC  >  NC_002947/2458863‑2458993                                                                                                                                                                                                                                                                                                 GGTGGGGCCTTGGTTGCAGGCGGTGAGTAGCAGCAGAATGAACAGTAGGGCTGTGCGCACAGTAGGGTTTCTCGGTTGCCGGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCGGGTTTACC                                                                                                                                           >  2:350150/1‑150                                                                                                            GCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACT                                                                                    >  1:82859/1‑98                                                                                                            GCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACT                                                                                    <  2:82859/98‑1                                                                                                             CTCCTACAGGGGCAGCGATAATCCTGTAGGAGCGGGGTTACCCGCGAAAGGGCCGGCACTGACAACCTAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCACCCAAGGCCCCACCCTGGAGCGCC                               >  2:270196/1‑150                                                                                                              TCCTACAGGGGCAGCGATAATCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGACAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCT                              >  2:78539/1‑150                                                                                                                                   CCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATGGGCAG         >  2:133135/1‑150                                                                                                                                     aGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACCGAGAAACCCTACTGTGCGCAAAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATGGGCAGCA       >  1:154671/2‑150                                                                                                                                     TGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATGGGCAGCA       >  1:60782/1‑150                                                                                                                                          GAGCTGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATGGGCAGCAGCTAC  <  1:232949/150‑1                                                                                                                                                                                                                                                                                                 GGTGGGGCCTTGGTTGCAGGCGGTGAGTAGCAGCAGAATGAACAGTAGGGCTGTGCGCACAGTAGGGTTTCTCGGTTGCCGGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCGGGTTTACCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2458954‑2458799 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtaggagcgggtttacccgcgaaGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATGGGCAGCAGCTAC  >  NC_002947/2458863‑2458993

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.