New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2703660 = | 9 (0.540) | 3 (0.190) | 3/276 | 1.8 | 26.5% | coding (136/1188 nt) | PP_2367 | transport protein |
? | NC_002947 | 2703708 = | 8 (0.500) | coding (88/1188 nt) | PP_2367 | transport protein |
GGGCTGCTGCCGGTCATCGCCCAGGGCGTGGAGGTGAGCATCCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2703705‑2703660 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccccaTCGGGGTGAACTCGGTAGTGCCGATGCCAAAGGCACCAATGGCCAACGCGAAGAGCACGCGGCCGGGTCTCATTGTTTGAGCAGTCATCGGTGTCAGTCCCAGGTTGGCGCCAGGCCGTCAGGGCTGACCTCGCGGCCGTTGCGCTC > NC_002947/2703708‑2703854 GGGCTGCTGCCGGTCATCGCCCAGGGCGTGGAGGTGAGCATCCCCATCGGGGTGAACTCGGTAGTGCCGATGCCAAAGGCACCAATGGCCAACGCGAAGAGCACGCGGCCGGGTCTCATTGTTTGAGCAGTCATCGGTGTCAGTCCCAGG > 1:138725/1‑150 TGCCGGTCATCGCCCAGGGCGTGGAGGTGAGCATCCCCATCGGGGTGAACTCGGTAGTGCCGATGCCAAAGGCACCAATGGCCAACGCGAAGAGCACGCGGCCGGGTCTCATTGTTTGAGCAGTCATCGGTGTCAGTCCCAG < 1:156923/142‑1 TGCCGGTCATCGCCCAGGGCGTGGAGGTGAGCATCCCCATCGGGGTGAACTCGGTAGTGCCGATGCCAAAGGCACCAATGGCCAACGCGAAGAGCACGCGGCCGGGTCTCATTGTTTGAGCAGTCATCGGTGTCAGTCCCAG > 2:156923/1‑142 CCCCATCGGGGTGAACTCGGTAGTGCCGATGCCAAAGGCACCAATGGCCAACGCGAAGAGCACGCGGCCGGGTCTCATTGTTTGAGCAGTCATCGGTGTCAGTCCCAGGTTGGCGCCAGGCCGTCAGGGCTGACCTCGCGGCCGTTGCGC > 1:59368/1‑150 CCCCATCGGGGTGAACTCGGTAGTGCCGATGCCAAAGGCACCAATGGCCAACGCGAAGAGCACGCGGCCGGGTCTCATTGTTTGAGCAGTCATCGGTGTCAGTCCCAGGTTGGCGCCAGGCCGTCAGGGCTGACCTCGCGGCCGTTGCGC > 2:82591/1‑150 CCATCGGGGTGAACTCGGTAGTGCCGATGCCAAAGGCACCAATGGCCAACGCGAAGAGCACGCGGCCGGGTCTCATTGTTTGAGCAGTCATCGGTGTCAGTCCCAGGTTGGCGCCAGGCCGTCAGGGCTGACCTCGCGGTCGTTGCGCTC > 1:95431/1‑150 GGGCTGCTGCCGGTCATCGCCCAGGGCGTGGAGGTGAGCATCCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2703705‑2703660 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccccaTCGGGGTGAACTCGGTAGTGCCGATGCCAAAGGCACCAATGGCCAACGCGAAGAGCACGCGGCCGGGTCTCATTGTTTGAGCAGTCATCGGTGTCAGTCCCAGGTTGGCGCCAGGCCGTCAGGGCTGACCTCGCGGCCGTTGCGCTC > NC_002947/2703708‑2703854 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |