New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2703660 = | 9 (0.540) | 3 (0.190) | 3/276 | 1.8 | 26.5% | coding (136/1188 nt) | PP_2367 | transport protein |
? | NC_002947 | 2703708 = | 8 (0.500) | coding (88/1188 nt) | PP_2367 | transport protein |
ACAGTGACGACAGCAGGTTGCCAAGGGTGAAGATGGCCATCAGCGCCATCAGCGCAGCGCGCTTCCCAAAGCGGCTGAACAGCAGGGTCATGATCGGCGCGCCGACCATCACGCCAATGGCATAGGCGGTGATCAGCATGCCGGCGCTGGGGATGCTCACCTCCACGCCCTGGGCGATGACCGGCAGCAGCCCCATCGGGGTGAACTCGGTAGTGCCGATGCCAAAGGCACCAATGGCCAACGCGAAGAGCACGCGGCCGGGTCTCATTGTTTGAGCAGTCATCGGTGTCA > NC_002947/2703513‑2703803 | gagcgcaacgaccgcgaggtcagccctgacggcctggcgccaacctgggactgacaccgatgactgctcaaacaatgagacccggccgcgtgctcttcgcgttggccattggtgcctttggcatcggcactaccgagttcaccccgaTgg > 1:95431‑M1/148‑150 (MQ=255) cAGTGACGACAGCAGGTTGCCAAGGGTGAAGATGGCCATCAGCGCCATCAGCGCAGCGCGCTTCCCAAAGCGGCTGAACAGCAGGGTCATGATCGGCGCGCCGACCATCACGCCAATGGCATAGGCGGTGATCAGCATGCCGGCGCTggg < 1:65910/150‑1 (MQ=255) gcgcaacggccgcgaggtcagccctgacggcctggcgccaacctgggactgacaccgatgactgctcaaacaatgagacccggccgcgtgctcttcgcgttggccattggtgcctttggcatcggcactaccgagttcaccccgaTgggg > 1:59368‑M1/146‑150 (MQ=255) gcgcaacggccgcgaggtcagccctgacggcctggcgccaacctgggactgacaccgatgactgctcaaacaatgagacccggccgcgtgctcttcgcgttggccattggtgcctttggcatcggcactaccgagttcaccccgaTgggg > 2:82591‑M1/146‑150 (MQ=255) cctgggactgacaccgatgactgctcaaacaatgagacccggccgcgtgctcttcgcgttggccattggtgcctttggcatcggcactaccgagttcaccccgaTGGGGATGCTCACCTCCACGCCCTGGGCGATGACCGGCAGCAGccc > 1:138725‑M1/105‑150 (MQ=255) ctgggactgacaccgatgactgctcaaacaatgagacccggccgcgtgctcttcgcgttggccattggtgcctttggcatcggcactaccgagttcaccccgaTGGGGATGCTCACCTCCACGCCCTGGGCGATGACCGgca < 1:156923‑M1/39‑1 (MQ=255) ctgggactgacaccgatgactgctcaaacaatgagacccggccgcgtgctcttcgcgttggccattggtgcctttggcatcggcactaccgagttcaccccgaTGGGGATGCTCACCTCCACGCCCTGGGCGATGACCGgca > 2:156923‑M1/104‑142 (MQ=255) gcgcTTCCCAAAGCGGCTGAACAGCAGGGTCATGATCGGCGCGCCGACCATCACGCCAATGGCATAGGCGGTGATCAGCATGCCGGCGCTGGGGATGCTCACCTCCACGCCCTGGGCGATGACCGGCAGCAGCCCCATCGGGGTGAACTc < 2:88822/150‑1 (MQ=255) cagcagGGTCATGATCGGCGCGCCGACCATCACGCCAATGGCATAGGCGGTGATCAGCATGCCGGCGCTGGGGATGCTCACCTCCACGCCCTGGGCGATGACCGGCAGCAGCCCCATCGGGGTGAACTCGGTAGTGCCGATGCCAAAGGc > 1:91924/1‑150 (MQ=255) gATCGGCGCGCCGACCATCACGCCAATGGCATAGGCGGTGATCAGCATGCCGGCGCTGGGGATGCTCACCTCCACGCCCTGGGCGATGACCGGCAGCAGCCCCATCGGGGTGAACTCGGTAGTGCCGATGCCAAAGGCACCAATGGCCaa > 2:210471/1‑150 (MQ=255) aaTGGCATAGGCGGTGATCAGCATGCCGGCGCTGGGGATGCTCACCTCCACGCCCTGGGCGATGACCGGCAGCAGCCCCATCGGGGTGAACTCGGTAGTGCCGATGCCAAAGGCACCAATGGCCAACGCGAAGAGCACGCGGCCGGGtct > 1:122561/1‑150 (MQ=255) ggCATAGGCGGTGATCAGCATGCCGGCGCTGGGGATGCTCACCTCCACGCCCTGGGCGATGACCGGCAGCAGCCCCATCGGGGTGAACTCGGTAGTGCCGATGCCAAAGGCACCAATGGCCAACGCGAAGAGCACGCGGCCGGGTCTCAt < 2:91924/150‑1 (MQ=255) gCATAGGCGGTGATCAGCATGCCGGCGCTGGGGATGCTCACCTCCACGCCCTGGGCGATGACCGGCAGCAGCCCCATCGGGGTGAACTCGGTAGTGCCGATGCCAAAGGCACCAATGGCCAACGCGAAGAGCACGCGGCCGGGTCTCAtt < 2:122561/150‑1 (MQ=255) cATGCCGGCGCTGGGGATGCTCACCTCCACGCCCTGGGCGATGACCGGCAGCAGCCCCATCGGGGTGAACTCGGTAGTGCCGATGCCAAAGGCACCAATGGCCAACGCGAAGAGCACGCGGCCGGGTCTCATTGTTTGAGCAGTCATCgg > 1:207212/1‑150 (MQ=255) cGGCGCTGGGGATGCTCACCTCCACGCCCTGGGCGATGACCGGCAGCAGCCCCATCGGGGTGAACTCGGTAGTGCCGATGCCAAAGGCACCAATGGCCAACGCGAAGAGCACGCGGCCGGGTCTCATTGTTTGAGCAGTCATCGGTGTCa < 2:152097/150‑1 (MQ=255) | ACAGTGACGACAGCAGGTTGCCAAGGGTGAAGATGGCCATCAGCGCCATCAGCGCAGCGCGCTTCCCAAAGCGGCTGAACAGCAGGGTCATGATCGGCGCGCCGACCATCACGCCAATGGCATAGGCGGTGATCAGCATGCCGGCGCTGGGGATGCTCACCTCCACGCCCTGGGCGATGACCGGCAGCAGCCCCATCGGGGTGAACTCGGTAGTGCCGATGCCAAAGGCACCAATGGCCAACGCGAAGAGCACGCGGCCGGGTCTCATTGTTTGAGCAGTCATCGGTGTCA > NC_002947/2703513‑2703803 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |