New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3124809 = | 15 (0.900) | 5 (0.310) | 3/274 | 1.8 | 25.4% | coding (279/888 nt) | PP_2740 | MerR family transcriptional regulator |
? | NC_002947 | 3124830 = | 15 (0.940) | coding (300/888 nt) | PP_2740 | MerR family transcriptional regulator |
GGAAGCGCGCGCAACGGCGGCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3124833‑3124809 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgcTTCCAGGGCATTCGATGCGCAGGCGCTGGAAGCGATCCATGGACAGCTGTTCACACTTTTGCCAAAGGCCACGGTGCTGCGGGACGTGCTGATGCCGGTTTGGCATGACCTGGCTTCAGGTACTGCGCCAGGCCAGCGTAGCCAATGG > NC_002947/3124830‑3124977 GGAAGCGCGCGCAACGGCGGCGCGCTTCCAGGGCATTCGATGCGCAGGCGCTGGAAGCGATCCATGGACAGCTGTTCACA > 1:303656/1‑80 GGAAGCGCGCGCAACGGCGGCGCGCTTCCAGGGCATTCGATGCGCAGGCGCTGGAAGCGATCCATGGACAGCTGTTCACA > 1:303660/1‑80 GGAAGCGCGCGCAACGGCGGCGCGCTTCCAGGGCATTCGATGCGCAGGCGCTGGAAGCGATCCATGGACAGCTGTTCACA < 2:303656/80‑1 GGAAGCGCGCGCAACGGCGGCGCGCTTCCAGGGCATTCGATGCGCAGGCGCTGGAAGCGATCCATGGACAGCTGTTCACA < 2:303660/80‑1 AGCGCGCGCAACGGCGGCGCGCTTCCAGGGCATTCGATGCGCAGGCGCTGGAAGCGATCCATGGACAGCTGTTCACACTTTTGCCAAAGGCCACGGTGCTGCGGGACGTGCTGATGCCGGTTTGGCATGACCTGGCTTCAGGTACTGCGC > 2:76914/1‑150 GCTTCCAGGGCATTCGATGCGCAGGCGCTGGAAGCGATCCATGGACAGCTGTTCACACTTTTGCCAAAGGCCACGGTGCTGCGGGACGTGCTGATGCCGGTTTGGCATGACCTGGCTTCAGGTACTGCGCCAGGCCAGCGTAGCCAATGG < 2:178873/150‑1 GGAAGCGCGCGCAACGGCGGCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3124833‑3124809 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgcTTCCAGGGCATTCGATGCGCAGGCGCTGGAAGCGATCCATGGACAGCTGTTCACACTTTTGCCAAAGGCCACGGTGCTGCGGGACGTGCTGATGCCGGTTTGGCATGACCTGGCTTCAGGTACTGCGCCAGGCCAGCGTAGCCAATGG > NC_002947/3124830‑3124977 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |