New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3124809 = | 15 (0.900) | 5 (0.310) | 3/274 | 1.8 | 25.4% | coding (279/888 nt) | PP_2740 | MerR family transcriptional regulator |
? | NC_002947 | 3124830 = | 15 (0.940) | coding (300/888 nt) | PP_2740 | MerR family transcriptional regulator |
CAGGATGTGCAGCGCATACGTGACATCTTGCGCTGGACCGCCAACGGCCTGCCCATCAGCAAGGTTGGCGACAGGCTCGCCGGCCAGCCTGAGGCGCCTGTGCAGCAGCCCTCGGCCTTTGACGACTGGCGCGCCGCCGTTGCGCGCGCTTCCAGGGCATTCGATGCGCAGGCGCTGGAAGCGATCCATGGACAGCTGTTCACACTTTTGCCAAAGGCCACGGTGCTGCGGGACGTGCTGATGCCGGTTTGGCATGACCTGGCTTCAGGTACTGCGCCAGGCCAGCGTAGCCAATGG > NC_002947/3124681‑3124977 | gcgcagtacctgaagccaggtcatgccaaaccggcatcagcacgtcccgcagcaccgtggcctttggcaaaagtgtgaacagctgtccatggatcgcttccagcgcctgcgcatcgaatgccctggaaGCGCGCCGCCGTTGCGCGCGCt > 2:76914‑M1/129‑150 (MQ=255) gcgcATACGTGACATCTTGCGCTGGACCGCCAACGGCCTGCCCATCAGCAAGGTTGGCGACAGGCTCGCCGGCCAGCCTGAGGCGCCTGTGCAGCAGCCCTCGGCCTTTGACGACTGGCGCGCCGCCGTTGCGCGCGCTTCCAGGGCAtt < 1:191864/150‑1 (MQ=255) cGCCAACGGCCTGCCCATCAGCAAGGTTGGCGACAGGCTCGCCGGCCAGCCTGAGGCGCCTGTGCAGCAGCCCTCGGCCTTTGACGACTGGCGCGCCGCCGTTGCGCGCGCTTCCAGGGCATTCGATGCGCAGGCGCTGGAAGCGATCCa > 2:121676/1‑150 (MQ=255) ccAACGGCCTGCCCATCAGCAAGGTTGGCGACAGGCTCGCCGGCCAGCCTGAGGCGCCTGTGCAGCAGCCCTCGGCCTTTGACGACTGGCGCGCCGCCGTTGCGCGCGCTTCCAGGGCATTCGa > 1:62675/1‑124 (MQ=255) ccAACGGCCTGCCCATCAGCAAGGTTGGCGACAGGCTCGCCGGCCAGCCTGAGGCGCCTGTGCAGCAGCCCTCGGCCTTTGACGACTGGCGCGCCGCCGTTGCGCGCGCTTCCAGGGCATTCGa < 2:62675/124‑1 (MQ=255) ccATCAGCAAGGTTGGCGACAGGCTCGCCGGCCAGCCTGAGGCGCCTGTGCAGCAGCCCTCGGCCTTTGACGACTGGCGCGCCGCCGTTGCGCGCGCTTCCAGGGCATTCGATGCGCAGGCGCTGGAAGCGATCCATGGACAGCTGTTca < 1:363329/150‑1 (MQ=255) aGCAAGGTTGGCGACAGGCTCGCCGGCCAGCCTGAGGCGCCTGTGCAGCAGCCCTCGGCCTTTGACGACTGGCGCGCCGCCGTTGCGCGCGCTTCCAGGGCATTCGATGCGCAGGCGCTGGAAGCGATCCATGGACAGCTGTTCACACtt > 1:224430/1‑150 (MQ=255) aGGTTGGCGACAGGCTCGCCGGCCAGCCTGAGGCGCCTGTGCAGCAGCCCTCGGCCTTTGACGACTGGCGCGCCGCCGTTGCGCGCGCTTCCAGGGCATTCGATGCGCAGGCGCTGGAAGCGATCCATGGACAGCTGTTCACACTTTTGc < 1:287422/150‑1 (MQ=255) ttGGCGACAGGCTCGCCGGCCAGCCTGAGGCGCCTGTGCAGCAGCCCTCGGCCTTTGACGACTGGCGCGCCGCCGTTGCGCGCGCTTCCAGGGCATTCGATGCGCAGGCGCTGGAAGCGATCCATGGACAGCTGTTCACACTTTTGCCaa > 2:21489/1‑150 (MQ=255) tgtgaacagctgtccatggatcgcttccagcgcctgcgcatcgaatgccctggaaGCGCGCCGCCGTTGCGCGCGCTTcc > 1:303656‑M1/56‑80 (MQ=255) tgtgaacagctgtccatggatcgcttccagcgcctgcgcatcgaatgccctggaaGCGCGCCGCCGTTGCGCGCGCTTcc > 1:303660‑M1/56‑80 (MQ=255) tgtgaacagctgtccatggatcgcttccagcgcctgcgcatcgaatgccctggaaGCGCGCCGCCGTTGCGCGCGCTTcc < 2:303660‑M1/25‑1 (MQ=255) tgtgaacagctgtccatggatcgcttccagcgcctgcgcatcgaatgccctggaaGCGCGCCGCCGTTGCGCGCGCTTcc < 2:303656‑M1/25‑1 (MQ=255) gCCAGCCTGAGGCGCCTGTGCAGCAGCCCTCGGCCTTTGACGACTGGCGCGCCGCCGTTGCGCGCGCTTCCAGGGCATTCGATGCGCAGGCGCTGGAAGCGATCCATGGACAGCTGTTCACACTTTTGCCAAAGGCCACGGTGCTGCggg < 1:184528/150‑1 (MQ=255) aGCCTGAGGCGCCTGTGCAGCAGCCCTCGGCCTTTGACGACTGGCGCGCCGCCGTTGCGCGCGCTTCCAGGGCATTCGATGCGCAGGCGCTGGAAGCGATCCATGGACAGCTGTTCACACTTTTGCCAAAGGCCACGGTGCTGCGGGACg < 2:61326/150‑1 (MQ=255) aGCCTGAGGCGCCTGTGCAGCAGCCCTCGGCCTTTGACGACTGGCGCGCCGCCGTTGCGCGCGCTTCCAGGGCATTCGATGCGCAGGCGCTGGAAGCGATCCATGGACAGCTGTTCACACTTTTGCCAAAGGCCACGGTGCTGCGGGACg < 2:61321/150‑1 (MQ=255) cTGAGGCGCCTGTGCAGCAGCCCTCGGCCTTTGACGACTGGCGCGCCGCCGTTGCGCGCGCTTCCAGGGCATTCGATGCGCAGGCGCTGGAAGCGATCCATGGACAGCTGTTCACACTTTTGCCAAAGGCCACGGTGCTGCGGGACGTGc > 2:370332/1‑150 (MQ=255) ggaagcgcgcgcaacggcggcgcgcTTCCAGGGCATTCGATGCGCAGGCGCTGGAAGCGATCCATGGACAGCTGTTcaca < 2:303656‑M2/55‑1 (MQ=255) ggaagcgcgcgcaacggcggcgcgcTTCCAGGGCATTCGATGCGCAGGCGCTGGAAGCGATCCATGGACAGCTGTTcaca > 1:303660‑M2/26‑80 (MQ=255) ggaagcgcgcgcaacggcggcgcgcTTCCAGGGCATTCGATGCGCAGGCGCTGGAAGCGATCCATGGACAGCTGTTcaca < 2:303660‑M2/55‑1 (MQ=255) ggaagcgcgcgcaacggcggcgcgcTTCCAGGGCATTCGATGCGCAGGCGCTGGAAGCGATCCATGGACAGCTGTTcaca > 1:303656‑M2/26‑80 (MQ=255) tGGCGCGCCGCCGTTGCGCGCGCTTCCAGGGCATTCGATGCGCAGGCGCTGGAAGCGATCCATGGACAGCTGTTCACACTTTTGCCAAAGGCCACGGTGCTGCGGGACGTGCTGATGCCGGTTTGGCATGACCTGGCTTCAGGTACTgcg > 1:95563/1‑150 (MQ=255) agcgcgcgcaacggcggcgcgcTTCCAGGGCATTCGATGCGCAGGCGCTGGAAGCGATCCATGGACAGCTGTTCACACTTTTGCCAAAGGCCACGGTGCTGCGGGACGTGCTGATGCCGGTTTGGCATGACCTGGCTTCAGGTACTgcgc > 2:76914‑M2/23‑150 (MQ=255) ttGCGCGCGCTTCCAGGGCATTCGATGCGCAGGCGCTGGAAGCGATCCATGGACAGCTGTTCACACTTTTGCCAAAGGCCACGGTGCTGCGGGACGTGCTGATGCCGGTTTGGCATGACCTGGCTTCAGGTACTGCGCCAGGCCAGCGTa < 2:135682/150‑1 (MQ=255) ttGCGCGCGCTTCCAGGGCATTCGATGCGCAGGCGCTGGAAGCGATCCATGGACAGCTGTTCACACTTTTGCCAAAGGCCACGGTGCTGCGGGACGTGCTGATGCCGGTTTGGCATGACCTGGCTTCAGGTACTGCGCCAGGCCAGCGTa < 1:121676/150‑1 (MQ=255) gcTTCCAGGGCATTCGATGCGCAGGCGCTGGAAGCGATCCATGGACAGCTGTTCACACTTTTGCCAAAGGCCACGGTGCTGCGGGACGTGCTGATGCCGGTTTGGCATGACCTGGCTTCAGGTACTGCGCCAGGCCAGCGTAGCCAATgg < 2:178873‑M2/148‑1 (MQ=255) | CAGGATGTGCAGCGCATACGTGACATCTTGCGCTGGACCGCCAACGGCCTGCCCATCAGCAAGGTTGGCGACAGGCTCGCCGGCCAGCCTGAGGCGCCTGTGCAGCAGCCCTCGGCCTTTGACGACTGGCGCGCCGCCGTTGCGCGCGCTTCCAGGGCATTCGATGCGCAGGCGCTGGAAGCGATCCATGGACAGCTGTTCACACTTTTGCCAAAGGCCACGGTGCTGCGGGACGTGCTGATGCCGGTTTGGCATGACCTGGCTTCAGGTACTGCGCCAGGCCAGCGTAGCCAATGG > NC_002947/3124681‑3124977 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |