New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3903718 = | 17 (1.020) | 5 (0.300) | 3/286 | 1.9 | 22.7% | coding (430/480 nt) | PP_3444 | glyoxalase family protein |
? | NC_002947 | 3903739 = | 17 (1.020) | coding (451/480 nt) | PP_3444 | glyoxalase family protein |
ATCTTCGCGGCACGGGCGCGAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3903740‑3903718 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATGTTCGGCGGTAGCCAAGCGACGAGTTGAAAGCCGCGCGACTTTGCTTGAAGCTTGAGGCTCGTAGCTTGGAGCTGCTTCATGCGAATCATCGACAAAACCGCCACCCAGGTGCGCAGCCTGACCCCCG > NC_002947/3903739‑3903868 ATCTTCGCGGCACGGGCGCGAATATGTTCGGCGGTAGCCAAGCGACGAGTTGAAAGCCGCGCGACTTTGCT < 1:291229/71‑1 ATCTTCGCGGCACGGGCGCGAATATGTTCGGCGGTAGCCAAGCGACGAGTTGAAAGCCGCGCGACTTTGCT > 2:291229/1‑71 TTCGCGGCACGGGCGCGAAGATGTTCGGCGGTAGCCAAGCGACGAGTTGAAAGCCGCGCGACTTTGCTTGAAGCTTGAGGCTCGTAGCTTGGAGCTGCTTCATGCGAATCATCGACAAAACCGCCACCCAGGTGCGCAGCCTGACCCCCG > 1:159136/1‑150 TTCGCGGCACGGGCGCGAAGATGTTCGGCGGTAGCCAAGCGACGAGTTGAAAGCCGCGCGACTTTGCTTGAAGCTTGAGGCTCGTAGCTTGGAGCTGCTTCATGCGAATCATCGACAAAACCGCCACCCAGGTGCGCAGCCTGACCCCCG > 1:352133/1‑150 TTCGCGGCACGGGCGCGAAGATGTTCGGCGGTAGCCAAGCGACGAGTTGAAAGCCGCGCGACTTTGCTTGAAGCTTGAGGCTCGTAGCTTGGAGCTGCTTCATGCGAATCATCGACAAAACCGCCACCCAGGTGCGCAGCCTGACCCCCG > 2:298675/1‑150 ATCTTCGCGGCACGGGCGCGAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3903740‑3903718 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATGTTCGGCGGTAGCCAAGCGACGAGTTGAAAGCCGCGCGACTTTGCTTGAAGCTTGAGGCTCGTAGCTTGGAGCTGCTTCATGCGAATCATCGACAAAACCGCCACCCAGGTGCGCAGCCTGACCCCCG > NC_002947/3903739‑3903868 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |